RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 SMIM17P0DL12 118 aa13.85□□□□□ -0.19
CHRNB1-206ENST00000574054 RPL35P42766 123 aaKnown RBP13.85□□□□□ -0.19
CHRNB1-206ENST00000574054 ATRAIDQ6UW56 229 aa13.85□□□□□ -0.19
CHRNB1-206ENST00000574054 SSBP4Q9BWG4 385 aaPredicted RBP13.85□□□□□ -0.19
CHRNB1-206ENST00000574054 GNG13Q9P2W3 67 aa13.85□□□□□ -0.19
CHRNB1-206ENST00000574054 ANGP03950 147 aaKnown RBP13.84□□□□□ -0.19
CHRNB1-206ENST00000574054 MPV17L2Q567V2 206 aa13.84□□□□□ -0.19
CHRNB1-206ENST00000574054 J3QL48 77 aa13.83□□□□□ -0.2
CHRNB1-206ENST00000574054 ENHOQ6UWT2 76 aa13.83□□□□□ -0.2
CHRNB1-206ENST00000574054 SCXQ7RTU7 201 aa13.83□□□□□ -0.2
CHRNB1-206ENST00000574054 AP1S3Q96PC3 154 aa13.83□□□□□ -0.2
CHRNB1-206ENST00000574054 DERL1Q9BUN8 251 aa13.83□□□□□ -0.2
CHRNB1-206ENST00000574054 MANBALQ9NQG1 85 aa13.83□□□□□ -0.2
CHRNB1-206ENST00000574054 PKIAP61925 76 aa13.82□□□□□ -0.2
CHRNB1-206ENST00000574054 CCL20P78556 96 aa13.82□□□□□ -0.2
CHRNB1-206ENST00000574054 C14orf177Q52M58 125 aa13.82□□□□□ -0.2
CHRNB1-206ENST00000574054 TPPP3Q9BW30 176 aa13.82□□□□□ -0.2
CHRNB1-206ENST00000574054 GZMBP10144 247 aa13.8□□□□□ -0.2
CHRNB1-206ENST00000574054 CENPWQ5EE01 88 aa13.8□□□□□ -0.2
CHRNB1-206ENST00000574054 C11orf52Q96A22 123 aa13.8□□□□□ -0.2
CHRNB1-206ENST00000574054 DAZAP1Q96EP5 407 aaKnown RBP13.8□□□□□ -0.2
CHRNB1-206ENST00000574054 CHAC1Q9BUX1 264 aa13.8□□□□□ -0.2
CHRNB1-206ENST00000574054 HLA-DQA1P01909 254 aa13.79□□□□□ -0.2
CHRNB1-206ENST00000574054 MGPP08493 103 aa13.79□□□□□ -0.2
CHRNB1-206ENST00000574054 TMEM97Q5BJF2 176 aa13.79□□□□□ -0.2
CHRNB1-206ENST00000574054 KIF25-AS1Q9Y6Z4 181 aa13.79□□□□□ -0.2
CHRNB1-206ENST00000574054 GAGE6Q13070 117 aa13.78□□□□□ -0.2
CHRNB1-206ENST00000574054 CLPSL2Q6UWE3 100 aa13.78□□□□□ -0.2
CHRNB1-206ENST00000574054 NTM-AS1Q6ZSK4 140 aa13.78□□□□□ -0.2
CHRNB1-206ENST00000574054 FER1L6-AS1Q8NA97 138 aa13.78□□□□□ -0.2
CHRNB1-206ENST00000574054 OR2D3Q8NGH3 330 aa13.78□□□□□ -0.2
CHRNB1-206ENST00000574054 VAX2Q9UIW0 290 aa13.78□□□□□ -0.2
CHRNB1-206ENST00000574054 USP17L23D6RBM5 183 aa13.77□□□□□ -0.21
CHRNB1-206ENST00000574054 TRBV25-1A0A075B6N4 114 aa13.76□□□□□ -0.21
CHRNB1-206ENST00000574054 TRAV1-1A0A0B4J248 108 aa13.76□□□□□ -0.21
CHRNB1-206ENST00000574054 TEX46H3BTG2 121 aa13.76□□□□□ -0.21
CHRNB1-206ENST00000574054 RAB5CP51148 216 aa13.76□□□□□ -0.21
CHRNB1-206ENST00000574054 RPS20P60866 119 aaKnown RBP13.76□□□□□ -0.21
CHRNB1-206ENST00000574054 RBX1P62877 108 aa13.76□□□□□ -0.21
CHRNB1-206ENST00000574054 MIAQ16674 131 aa13.76□□□□□ -0.21
CHRNB1-206ENST00000574054 RAB19A4D1S5 217 aa13.75□□□□□ -0.21
CHRNB1-206ENST00000574054 EIF5AL1Q6IS14 154 aaKnown RBP13.75□□□□□ -0.21
CHRNB1-206ENST00000574054 CIRBP-AS1Q8TBR5 109 aa13.75□□□□□ -0.21
CHRNB1-206ENST00000574054 DEFB104AQ8WTQ1 72 aa13.75□□□□□ -0.21
CHRNB1-206ENST00000574054 IGLV2-8P01709 118 aa13.74□□□□□ -0.21
CHRNB1-206ENST00000574054 IGLC6P0CF74 106 aa13.74□□□□□ -0.21
CHRNB1-206ENST00000574054 GNG4P50150 75 aa13.74□□□□□ -0.21
CHRNB1-206ENST00000574054 LINC00269Q8N2A0 174 aa13.74□□□□□ -0.21
CHRNB1-206ENST00000574054 IGHV1-24A0A0C4DH33 117 aa13.73□□□□□ -0.21
CHRNB1-206ENST00000574054 H7C1H1 209 aa13.73□□□□□ -0.21
CHRNB1-206ENST00000574054 M0QY20 66 aa13.73□□□□□ -0.21
CHRNB1-206ENST00000574054 CACNG7P62955 275 aa13.73□□□□□ -0.21
CHRNB1-206ENST00000574054 SUMO4Q6EEV6 95 aa13.73□□□□□ -0.21
CHRNB1-206ENST00000574054 XKRY2A2RUG3 117 aa13.72□□□□□ -0.21
CHRNB1-206ENST00000574054 C19orf71A6NCJ1 209 aa13.72□□□□□ -0.21
CHRNB1-206ENST00000574054 P01737 135 aa13.72□□□□□ -0.21
CHRNB1-206ENST00000574054 MEF2BQ02080 365 aaPredicted RBP13.72□□□□□ -0.21
CHRNB1-206ENST00000574054 PRR34Q9NV39 138 aa13.72□□□□□ -0.21
CHRNB1-206ENST00000574054 PDE6DO43924 150 aa13.71□□□□□ -0.21
CHRNB1-206ENST00000574054 IFNA1P01562 189 aa13.71□□□□□ -0.21
CHRNB1-206ENST00000574054 PRSS1P07477 247 aa13.71□□□□□ -0.21
CHRNB1-206ENST00000574054 SULT1A2P50226 295 aa13.71□□□□□ -0.21
CHRNB1-206ENST00000574054 NKX2-5P52952 324 aaPredicted RBP13.71□□□□□ -0.21
CHRNB1-206ENST00000574054 IQCJQ1A5X6 159 aa13.71□□□□□ -0.21
CHRNB1-206ENST00000574054 MED9Q9NWA0 146 aa13.71□□□□□ -0.21
CHRNB1-206ENST00000574054 SMIM12Q96EX1 92 aa13.7□□□□□ -0.22
CHRNB1-206ENST00000574054 KRTAP29-1A8MX34 341 aaPredicted RBP13.69□□□□□ -0.22
CHRNB1-206ENST00000574054 F2Z2F3 143 aa13.69□□□□□ -0.22
CHRNB1-206ENST00000574054 LYZL1Q6UWQ5 148 aa13.69□□□□□ -0.22
CHRNB1-206ENST00000574054 TRBV20OR9-2A0A075B6H5 130 aa13.68□□□□□ -0.22
CHRNB1-206ENST00000574054 IGLV10-54A0A075B6I4 117 aa13.68□□□□□ -0.22
CHRNB1-206ENST00000574054 TRGC1P0CF51 173 aa13.68□□□□□ -0.22
CHRNB1-206ENST00000574054 RASL11AQ6T310 242 aa13.68□□□□□ -0.22
CHRNB1-206ENST00000574054 TMEM243Q9BU79 118 aa13.68□□□□□ -0.22
CHRNB1-206ENST00000574054 BIN3Q9NQY0 253 aa13.68□□□□□ -0.22
CHRNB1-206ENST00000574054 BCL2P10415 239 aa13.67□□□□□ -0.22
CHRNB1-206ENST00000574054 REG3AQ06141 175 aa13.67□□□□□ -0.22
CHRNB1-206ENST00000574054 KRTAP10-4P60372 401 aaPredicted RBP13.66□□□□□ -0.22
CHRNB1-206ENST00000574054 DGAT2L7PQ6IED9 249 aa13.66□□□□□ -0.22
CHRNB1-206ENST00000574054 KRTAP26-1Q6PEX3 210 aa13.66□□□□□ -0.22
CHRNB1-206ENST00000574054 DPH3P1Q9H4G8 78 aa13.66□□□□□ -0.22
CHRNB1-206ENST00000574054 NTF3P20783 257 aa13.65□□□□□ -0.22
CHRNB1-206ENST00000574054 C20orf203Q8NBC4 194 aa13.64□□□□□ -0.23
CHRNB1-206ENST00000574054 NIT2Q9NQR4 276 aa13.64□□□□□ -0.23
CHRNB1-206ENST00000574054 LRP1Q07954 4544 aaKnown RBP13.63□□□□□ -0.23
CHRNB1-206ENST00000574054 IGLV4-60A0A075B6I1 120 aa13.63□□□□□ -0.23
CHRNB1-206ENST00000574054 UBE2L6O14933 153 aa13.63□□□□□ -0.23
CHRNB1-206ENST00000574054 SLC51BQ86UW2 128 aa13.63□□□□□ -0.23
CHRNB1-206ENST00000574054 C9orf163Q8N9P6 203 aa13.63□□□□□ -0.23
CHRNB1-206ENST00000574054 NUDT10Q8NFP7 164 aa13.63□□□□□ -0.23
CHRNB1-206ENST00000574054 NUDT11Q96G61 164 aa13.63□□□□□ -0.23
CHRNB1-206ENST00000574054 CTRLP40313 264 aa13.62□□□□□ -0.23
CHRNB1-206ENST00000574054 RPL37AP61513 92 aaKnown RBP13.62□□□□□ -0.23
CHRNB1-206ENST00000574054 TWIST1Q15672 202 aa13.62□□□□□ -0.23
CHRNB1-206ENST00000574054 TCTE3Q8IZS6 198 aa13.62□□□□□ -0.23
CHRNB1-206ENST00000574054 C9orf62Q8N4C0 152 aa13.62□□□□□ -0.23
CHRNB1-206ENST00000574054 PGLYRP4Q96LB8 373 aa13.62□□□□□ -0.23
CHRNB1-206ENST00000574054 GFRA4Q9GZZ7 299 aa13.62□□□□□ -0.23
CHRNB1-206ENST00000574054 PKHD1L1Q86WI1 4243 aa13.61□□□□□ -0.23
CHRNB1-206ENST00000574054 TRAV8-4A0A0B4J246 113 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms