RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 LGALS9CQ6DKI2 356 aa12.38□□□□□ -0.43
CACNA1A-202ENST00000573710 SPANXDQ9BXN6 97 aa12.37□□□□□ -0.43
CACNA1A-202ENST00000573710 FHL1Q13642 323 aa12.37□□□□□ -0.43
CACNA1A-202ENST00000573710 PNRC2Q9NPJ4 139 aaKnown RBP12.37□□□□□ -0.43
CACNA1A-202ENST00000573710 BLCAPP62952 87 aa12.37□□□□□ -0.43
CACNA1A-202ENST00000573710 C7orf33Q8WU49 177 aa12.37□□□□□ -0.43
CACNA1A-202ENST00000573710 CRYGDP07320 174 aa12.36□□□□□ -0.43
CACNA1A-202ENST00000573710 PIK3CD-AS1Q5SR53 167 aa12.36□□□□□ -0.43
CACNA1A-202ENST00000573710 KAAG1Q9UBP8 84 aa12.36□□□□□ -0.43
CACNA1A-202ENST00000573710 NANOS2P60321 138 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-202ENST00000573710 SONP18583 2426 aaKnown RBP12.36□□□□□ -0.43
CACNA1A-202ENST00000573710 WFDC2Q14508 124 aa12.36□□□□□ -0.43
CACNA1A-202ENST00000573710 WFDC13Q8IUB5 93 aa12.36□□□□□ -0.43
CACNA1A-202ENST00000573710 LY6G6EA0A0G2JKS1 128 aa12.35□□□□□ -0.43
CACNA1A-202ENST00000573710 ZNF833PQ6ZTB9 187 aa12.35□□□□□ -0.43
CACNA1A-202ENST00000573710 DOPEY1Q5JWR5 2465 aa12.35□□□□□ -0.43
CACNA1A-202ENST00000573710 ENHOQ6UWT2 76 aa12.35□□□□□ -0.43
CACNA1A-202ENST00000573710 JMJD7-PLA2G4BH0Y9G9 81 aa12.34□□□□□ -0.43
CACNA1A-202ENST00000573710 TRBV7-3A0A075B6L6 115 aa12.34□□□□□ -0.43
CACNA1A-202ENST00000573710 C17orf58Q2M2W7 97 aa12.34□□□□□ -0.43
CACNA1A-202ENST00000573710 TMEM89A2RUT3 159 aa12.33□□□□□ -0.43
CACNA1A-202ENST00000573710 SLX1AQ9BQ83 275 aa12.33□□□□□ -0.43
CACNA1A-202ENST00000573710 IGKV2-28A0A075B6P5 120 aa12.33□□□□□ -0.44
CACNA1A-202ENST00000573710 IGLV3-32A0A0A0MS00 114 aa12.33□□□□□ -0.44
CACNA1A-202ENST00000573710 H0YGX0 51 aa12.33□□□□□ -0.44
CACNA1A-202ENST00000573710 IGKV2D-28P01615 120 aa12.33□□□□□ -0.44
CACNA1A-202ENST00000573710 IGLV3-19P01714 112 aa12.33□□□□□ -0.44
CACNA1A-202ENST00000573710 NDUFC2-KCTD14E9PQ53 114 aa12.33□□□□□ -0.44
CACNA1A-202ENST00000573710 LINC00269Q8N2A0 174 aa12.32□□□□□ -0.44
CACNA1A-202ENST00000573710 IL17DQ8TAD2 202 aa12.32□□□□□ -0.44
CACNA1A-202ENST00000573710 IGHV1-58A0A0C4DH39 117 aa12.32□□□□□ -0.44
CACNA1A-202ENST00000573710 A0A0J9YXV3 536 aa12.32□□□□□ -0.44
CACNA1A-202ENST00000573710 CIRBP-AS1Q8TBR5 109 aa12.31□□□□□ -0.44
CACNA1A-202ENST00000573710 ABCA2Q9BZC7 2435 aa12.31□□□□□ -0.44
CACNA1A-202ENST00000573710 DEFB1P60022 68 aa12.31□□□□□ -0.44
CACNA1A-202ENST00000573710 CEP192Q8TEP8 1941 aa12.31□□□□□ -0.44
CACNA1A-202ENST00000573710 IGHV2-5P01817 119 aa12.31□□□□□ -0.44
CACNA1A-202ENST00000573710 AJUBAQ96IF1 538 aa12.3□□□□□ -0.44
CACNA1A-202ENST00000573710 Q6ZUT4 128 aa12.3□□□□□ -0.44
CACNA1A-202ENST00000573710 C10orf105Q8TEF2 133 aa12.3□□□□□ -0.44
CACNA1A-202ENST00000573710 C14orf177Q52M58 125 aa12.3□□□□□ -0.44
CACNA1A-202ENST00000573710 TANC1Q9C0D5 1861 aa12.3□□□□□ -0.44
CACNA1A-202ENST00000573710 C20orf78Q9BR46 151 aa12.3□□□□□ -0.44
CACNA1A-202ENST00000573710 PCNX3Q9H6A9 2034 aa12.3□□□□□ -0.44
CACNA1A-202ENST00000573710 FNDC1Q4ZHG4 1894 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-202ENST00000573710 NUP210LQ5VU65 1888 aa12.29□□□□□ -0.44
CACNA1A-202ENST00000573710 WT1-ASQ06250 92 aa12.29□□□□□ -0.44
CACNA1A-202ENST00000573710 P0DMU3 169 aa12.29□□□□□ -0.44
CACNA1A-202ENST00000573710 FAM231AP0DMU4 169 aa12.29□□□□□ -0.44
CACNA1A-202ENST00000573710 FAM231CP0DMU5 169 aa12.29□□□□□ -0.44
CACNA1A-202ENST00000573710 TRAV1-1A0A0B4J248 108 aa12.29□□□□□ -0.44
CACNA1A-202ENST00000573710 CEMP1Q6PRD7 247 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-202ENST00000573710 Q8N1Y9 231 aa12.28□□□□□ -0.44
CACNA1A-202ENST00000573710 TMEM190Q8WZ59 177 aa12.28□□□□□ -0.44
CACNA1A-202ENST00000573710 RPL37AP8A6NKH3 93 aa12.28□□□□□ -0.44
CACNA1A-202ENST00000573710 Q0VG73 95 aa12.28□□□□□ -0.44
CACNA1A-202ENST00000573710 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-202ENST00000573710 SPANXCQ9NY87 97 aa12.28□□□□□ -0.44
CACNA1A-202ENST00000573710 MGAMO43451 1857 aa12.28□□□□□ -0.44
CACNA1A-202ENST00000573710 H3BQ85 93 aa12.27□□□□□ -0.44
CACNA1A-202ENST00000573710 PTH2Q96A98 100 aa12.27□□□□□ -0.44
CACNA1A-202ENST00000573710 V9GYV3 84 aa12.27□□□□□ -0.45
CACNA1A-202ENST00000573710 Q8N9L7 120 aa12.27□□□□□ -0.45
CACNA1A-202ENST00000573710 C11orf52Q96A22 123 aa12.27□□□□□ -0.45
CACNA1A-202ENST00000573710 FXYD5Q96DB9 178 aa12.26□□□□□ -0.45
CACNA1A-202ENST00000573710 RAI1Q7Z5J4 1906 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-202ENST00000573710 FLVCR1-AS1Q8TAF5 88 aa12.26□□□□□ -0.45
CACNA1A-202ENST00000573710 ZSWIM8A7E2V4 1837 aa12.26□□□□□ -0.45
CACNA1A-202ENST00000573710 DNAJC9-AS1A6NH13 148 aa12.26□□□□□ -0.45
CACNA1A-202ENST00000573710 DEFB131BA0A096LNP1 70 aa12.26□□□□□ -0.45
CACNA1A-202ENST00000573710 WT1P19544 449 aaPredicted RBP12.26□□□□□ -0.45
CACNA1A-202ENST00000573710 AGPAT4-IT1Q9H0P7 198 aa12.25□□□□□ -0.45
CACNA1A-202ENST00000573710 LHFPL1Q86WI0 220 aa12.25□□□□□ -0.45
CACNA1A-202ENST00000573710 A0A0G2JMZ2 1700 aa12.25□□□□□ -0.45
CACNA1A-202ENST00000573710 LRRC37A2A6NM11 1700 aa12.25□□□□□ -0.45
CACNA1A-202ENST00000573710 NUP210Q8TEM1 1887 aaPredicted RBP12.25□□□□□ -0.45
CACNA1A-202ENST00000573710 B3GALT5-AS1P59052 145 aa12.25□□□□□ -0.45
CACNA1A-202ENST00000573710 HILS1P60008 231 aa12.24□□□□□ -0.45
CACNA1A-202ENST00000573710 Q6Q795 121 aa12.24□□□□□ -0.45
CACNA1A-202ENST00000573710 KIAA1671Q9BY89 1806 aa12.24□□□□□ -0.45
CACNA1A-202ENST00000573710 GPR179Q6PRD1 2367 aa12.24□□□□□ -0.45
CACNA1A-202ENST00000573710 A6NDX4 124 aa12.24□□□□□ -0.45
CACNA1A-202ENST00000573710 RITA1Q96K30 269 aa12.24□□□□□ -0.45
CACNA1A-202ENST00000573710 Q6ZR03 302 aa12.23□□□□□ -0.45
CACNA1A-202ENST00000573710 C2orf70A6NJV1 201 aa12.23□□□□□ -0.45
CACNA1A-202ENST00000573710 C22orf34Q6ZV56 151 aa12.23□□□□□ -0.45
CACNA1A-202ENST00000573710 CSRP3P50461 194 aa12.22□□□□□ -0.45
CACNA1A-202ENST00000573710 INAFM1C9JVW0 142 aa12.22□□□□□ -0.45
CACNA1A-202ENST00000573710 IGLC1P0CG04 106 aa12.22□□□□□ -0.45
CACNA1A-202ENST00000573710 IGLV2-8P01709 118 aa12.22□□□□□ -0.45
CACNA1A-202ENST00000573710 MED14OSP0DP75 135 aa12.22□□□□□ -0.45
CACNA1A-202ENST00000573710 PMAIP1Q13794 54 aa12.21□□□□□ -0.45
CACNA1A-202ENST00000573710 LINC00173Q6ZV60 143 aa12.21□□□□□ -0.45
CACNA1A-202ENST00000573710 LINC00526Q96FQ7 95 aa12.21□□□□□ -0.45
CACNA1A-202ENST00000573710 TTTY13Q9BZ97 58 aa12.21□□□□□ -0.45
CACNA1A-202ENST00000573710 COL4A6Q14031 1691 aa12.21□□□□□ -0.46
CACNA1A-202ENST00000573710 TRBV27A0A0K0K1C4 114 aa12.21□□□□□ -0.46
CACNA1A-202ENST00000573710 FAM222AQ5U5X8 452 aa12.21□□□□□ -0.46
CACNA1A-202ENST00000573710 NFE4Q86UQ8 179 aa12.21□□□□□ -0.46
CACNA1A-202ENST00000573710 MSRB1Q9NZV6 116 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms