RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 DUX3Q96PT4 197 aa8.28□□□□□ -1.08
RPAIN-212ENST00000573126 TIMM17AQ99595 171 aa8.28□□□□□ -1.08
RPAIN-212ENST00000573126 TRBV6-5A0A0K0K1A5 114 aa8.28□□□□□ -1.08
RPAIN-212ENST00000573126 TEX48A0A1B0GUV7 120 aa8.28□□□□□ -1.08
RPAIN-212ENST00000573126 TSPEAR-AS2P59090 65 aa8.28□□□□□ -1.08
RPAIN-212ENST00000573126 KRTAP10-9P60411 292 aa8.28□□□□□ -1.08
RPAIN-212ENST00000573126 RRN3P1Q2M238 152 aa8.28□□□□□ -1.08
RPAIN-212ENST00000573126 Q6YL49 198 aa8.28□□□□□ -1.08
RPAIN-212ENST00000573126 TMEM141Q96I45 108 aa8.28□□□□□ -1.08
RPAIN-212ENST00000573126 SFTA2Q6UW10 78 aa8.27□□□□□ -1.09
RPAIN-212ENST00000573126 LINC01619G3V211 115 aa8.27□□□□□ -1.09
RPAIN-212ENST00000573126 DEFB131AP59861 70 aa8.27□□□□□ -1.09
RPAIN-212ENST00000573126 HERVK_113P61574 105 aa8.27□□□□□ -1.09
RPAIN-212ENST00000573126 WFDC2Q14508 124 aa8.27□□□□□ -1.09
RPAIN-212ENST00000573126 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
RPAIN-212ENST00000573126 A0A1B0GWB2 263 aa8.26□□□□□ -1.09
RPAIN-212ENST00000573126 P0DMU3 169 aa8.26□□□□□ -1.09
RPAIN-212ENST00000573126 FAM231AP0DMU4 169 aa8.26□□□□□ -1.09
RPAIN-212ENST00000573126 FAM231CP0DMU5 169 aa8.26□□□□□ -1.09
RPAIN-212ENST00000573126 IGHV4-31P0DP07 118 aa8.26□□□□□ -1.09
RPAIN-212ENST00000573126 PAPPA-AS1Q5QFB9 102 aa8.26□□□□□ -1.09
RPAIN-212ENST00000573126 TRPT1Q86TN4 253 aaKnown RBP8.26□□□□□ -1.09
RPAIN-212ENST00000573126 LINC01549A6NIU2 74 aa8.26□□□□□ -1.09
RPAIN-212ENST00000573126 KHDC1LQ5JSQ8 128 aa8.26□□□□□ -1.09
RPAIN-212ENST00000573126 MRPL16Q9NX20 251 aaKnown RBP8.26□□□□□ -1.09
RPAIN-212ENST00000573126 PROK1P58294 105 aa8.25□□□□□ -1.09
RPAIN-212ENST00000573126 SETD2Q9BYW2 2564 aaPredicted RBP8.25□□□□□ -1.09
RPAIN-212ENST00000573126 CCDC168Q8NDH2 2452 aa8.25□□□□□ -1.09
RPAIN-212ENST00000573126 IGHV3-64A0A075B6Q5 118 aa8.25□□□□□ -1.09
RPAIN-212ENST00000573126 A0A0J9YY99 117 aa8.25□□□□□ -1.09
RPAIN-212ENST00000573126 BBC3Q96PG8 261 aaPredicted RBP8.25□□□□□ -1.09
RPAIN-212ENST00000573126 UBR5O95071 2799 aaPredicted RBP8.25□□□□□ -1.09
RPAIN-212ENST00000573126 TRGV11A0A075B6L2 103 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 APOMO95445 188 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 FSHBP01225 129 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 NSUN5P1Q3KNT7 163 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 NF1P21359 2839 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 TMEM238LA0A1B0GVL6 79 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 A6NJY4 79 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 SH2D6Q7Z4S9 175 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 TMEM61Q8N0U2 210 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 C20orf203Q8NBC4 194 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 NOTCH3Q9UM47 2321 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 CHD6Q8TD26 2715 aa8.24□□□□□ -1.09
RPAIN-212ENST00000573126 I3L3M4 83 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 RHOHQ15669 191 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 ETDBQ3ZM63 59 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 Q9UF83 564 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 WNK1Q9H4A3 2382 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 RBMY1BA6NDE4 496 aaKnown RBP8.23□□□□□ -1.09
RPAIN-212ENST00000573126 RBMY1EA6NEQ0 496 aaKnown RBP8.23□□□□□ -1.09
RPAIN-212ENST00000573126 F8W1H4 67 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 J3QQQ9 107 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 RBMY1DP0C7P1 496 aaKnown RBP8.23□□□□□ -1.09
RPAIN-212ENST00000573126 Q5PR19 223 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 NBPF19A0A087WUL8 3843 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 H3BMM0 161 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 UBE2D1P51668 147 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 RNF152Q8N8N0 203 aa8.23□□□□□ -1.09
RPAIN-212ENST00000573126 GAGE13Q4V321 117 aa8.22□□□□□ -1.09
RPAIN-212ENST00000573126 SPAG8Q99932 426 aaPredicted RBP8.22□□□□□ -1.09
RPAIN-212ENST00000573126 CR1P17927 2039 aa8.22□□□□□ -1.09
RPAIN-212ENST00000573126 LOC107984156A0A0G2JMH3 177 aa8.22□□□□□ -1.09
RPAIN-212ENST00000573126 A0A0J9YXV3 536 aa8.22□□□□□ -1.09
RPAIN-212ENST00000573126 LGALS3P17931 250 aaKnown RBP8.22□□□□□ -1.09
RPAIN-212ENST00000573126 CEMP1Q6PRD7 247 aaPredicted RBP8.22□□□□□ -1.09
RPAIN-212ENST00000573126 ARL17AQ8IVW1 177 aa8.22□□□□□ -1.09
RPAIN-212ENST00000573126 AMELXQ99217 191 aa8.22□□□□□ -1.09
RPAIN-212ENST00000573126 SPANXB1Q9NS25 103 aaPredicted RBP8.22□□□□□ -1.09
RPAIN-212ENST00000573126 APCP25054 2843 aa8.21□□□□□ -1.09
RPAIN-212ENST00000573126 PRRC2AP48634 2157 aaKnown RBP8.21□□□□□ -1.09
RPAIN-212ENST00000573126 IGLV4-3A0A075B6K6 122 aa8.21□□□□□ -1.09
RPAIN-212ENST00000573126 TSPAN13O95857 204 aa8.21□□□□□ -1.09
RPAIN-212ENST00000573126 RNASE13Q5GAN3 156 aaKnown RBP8.21□□□□□ -1.09
RPAIN-212ENST00000573126 NFE4Q86UQ8 179 aa8.21□□□□□ -1.09
RPAIN-212ENST00000573126 VCX2Q9H322 139 aa8.21□□□□□ -1.09
RPAIN-212ENST00000573126 DLX4Q92988 240 aaPredicted RBP8.21□□□□□ -1.1
RPAIN-212ENST00000573126 IGHV3-30P01768 117 aa8.2□□□□□ -1.1
RPAIN-212ENST00000573126 IGHV3-30-5P0DP03 117 aa8.2□□□□□ -1.1
RPAIN-212ENST00000573126 SLC25A29Q8N8R3 303 aa8.2□□□□□ -1.1
RPAIN-212ENST00000573126 Q96MF0 132 aa8.2□□□□□ -1.1
RPAIN-212ENST00000573126 ZNF22P17026 224 aaPredicted RBP8.2□□□□□ -1.1
RPAIN-212ENST00000573126 Q6ZSN1 163 aa8.2□□□□□ -1.1
RPAIN-212ENST00000573126 NDUFA11Q86Y39 141 aa8.2□□□□□ -1.1
RPAIN-212ENST00000573126 PRO0461Q9UI25 63 aa8.2□□□□□ -1.1
RPAIN-212ENST00000573126 NIPBLQ6KC79 2804 aaeCLIP8.2□□□□□ -1.1
RPAIN-212ENST00000573126 TMEM223A0PJW6 202 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 RHODO00212 210 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 CD28P10747 220 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 DEFB113Q30KQ7 82 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 DYNLRB2Q8TF09 96 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 ITPR3Q14573 2671 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 CFC1BP0CG36 223 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 CFC1P0CG37 223 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 C11orf44Q8N8P7 122 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 MAP6D1Q9H9H5 199 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 PEMTQ9UBM1 199 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 TNFRSF18Q9Y5U5 241 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 AKAP9Q99996 3911 aa8.19□□□□□ -1.1
RPAIN-212ENST00000573126 M0R2P5 195 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms