RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 DPH3P1Q9H4G8 78 aa10.78□□□□□ -0.68
CHD3-215ENST00000572750 TRBV7-3A0A075B6L6 115 aa10.77□□□□□ -0.69
CHD3-215ENST00000572750 UBE2D3P61077 147 aa10.77□□□□□ -0.69
CHD3-215ENST00000572750 UBE2D2P62837 147 aa10.77□□□□□ -0.69
CHD3-215ENST00000572750 OR10J3Q5JRS4 329 aa10.77□□□□□ -0.69
CHD3-215ENST00000572750 FOXA3P55318 350 aaPredicted RBP10.76□□□□□ -0.69
CHD3-215ENST00000572750 LELP1Q5T871 98 aa10.76□□□□□ -0.69
CHD3-215ENST00000572750 C1orf134Q5TEV5 83 aa10.76□□□□□ -0.69
CHD3-215ENST00000572750 BORCS7Q96B45 105 aa10.76□□□□□ -0.69
CHD3-215ENST00000572750 TRAV8-6A0A0B4J262 113 aa10.75□□□□□ -0.69
CHD3-215ENST00000572750 FAM231BA6NCW3 169 aa10.75□□□□□ -0.69
CHD3-215ENST00000572750 M0QY20 66 aa10.75□□□□□ -0.69
CHD3-215ENST00000572750 DNAH10OSP0CZ25 163 aa10.75□□□□□ -0.69
CHD3-215ENST00000572750 COMMD7Q86VX2 200 aa10.75□□□□□ -0.69
CHD3-215ENST00000572750 C6orf223Q8N319 242 aa10.75□□□□□ -0.69
CHD3-215ENST00000572750 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
CHD3-215ENST00000572750 UBR4Q5T4S7 5183 aa10.75□□□□□ -0.69
CHD3-215ENST00000572750 TRAV26-2A0A0B4J265 109 aa10.74□□□□□ -0.69
CHD3-215ENST00000572750 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
CHD3-215ENST00000572750 A0A1B0GUT8 65 aa10.74□□□□□ -0.69
CHD3-215ENST00000572750 SMIM15Q7Z3B0 74 aa10.74□□□□□ -0.69
CHD3-215ENST00000572750 SMIM27A0A1W2PRY6 76 aa10.73□□□□□ -0.69
CHD3-215ENST00000572750 H7C1H1 209 aa10.73□□□□□ -0.69
CHD3-215ENST00000572750 ADCYAP1P18509 176 aa10.73□□□□□ -0.69
CHD3-215ENST00000572750 UQCC3Q6UW78 93 aa10.73□□□□□ -0.69
CHD3-215ENST00000572750 Q8N3U1 123 aa10.73□□□□□ -0.69
CHD3-215ENST00000572750 NAT8BQ9UHF3 227 aa10.73□□□□□ -0.69
CHD3-215ENST00000572750 PNRC1Q12796 327 aaPredicted RBP10.72□□□□□ -0.69
CHD3-215ENST00000572750 RASL11AQ6T310 242 aa10.72□□□□□ -0.69
CHD3-215ENST00000572750 A0A087WWC5 75 aa10.71□□□□□ -0.69
CHD3-215ENST00000572750 A0A1B0GVY2 172 aa10.71□□□□□ -0.69
CHD3-215ENST00000572750 PRSS29PA6NIE9 313 aa10.71□□□□□ -0.69
CHD3-215ENST00000572750 IGHV3-30P01768 117 aa10.71□□□□□ -0.69
CHD3-215ENST00000572750 IGHV3-33P01772 117 aa10.71□□□□□ -0.69
CHD3-215ENST00000572750 IGHV3-30-3P0DP02 117 aa10.71□□□□□ -0.69
CHD3-215ENST00000572750 IGHV3-30-5P0DP03 117 aa10.71□□□□□ -0.69
CHD3-215ENST00000572750 LINC01556Q5JQF7 62 aa10.71□□□□□ -0.69
CHD3-215ENST00000572750 LINC00336Q6ZUF6 198 aa10.71□□□□□ -0.69
CHD3-215ENST00000572750 RIGQ13278 110 aa10.7□□□□□ -0.7
CHD3-215ENST00000572750 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
CHD3-215ENST00000572750 TNFRSF18Q9Y5U5 241 aa10.7□□□□□ -0.7
CHD3-215ENST00000572750 TRAV9-2A0A087WT02 112 aa10.69□□□□□ -0.7
CHD3-215ENST00000572750 TMEM218A2RU14 115 aa10.69□□□□□ -0.7
CHD3-215ENST00000572750 F8W036 122 aa10.69□□□□□ -0.7
CHD3-215ENST00000572750 RPL39LQ96EH5 51 aaKnown RBP10.69□□□□□ -0.7
CHD3-215ENST00000572750 DNAJC30Q96LL9 226 aa10.69□□□□□ -0.7
CHD3-215ENST00000572750 TMEM191AQ9H0A3 160 aa10.69□□□□□ -0.7
CHD3-215ENST00000572750 TRBV6-8A0A0A6YYG3 113 aa10.68□□□□□ -0.7
CHD3-215ENST00000572750 LINC00862A6NCI5 91 aa10.68□□□□□ -0.7
CHD3-215ENST00000572750 MRPL54Q6P161 138 aaKnown RBP10.68□□□□□ -0.7
CHD3-215ENST00000572750 DAZ4Q86SG3 579 aaKnown RBP10.68□□□□□ -0.7
CHD3-215ENST00000572750 AMN1Q8IY45 258 aa10.68□□□□□ -0.7
CHD3-215ENST00000572750 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.68□□□□□ -0.7
CHD3-215ENST00000572750 NIT2Q9NQR4 276 aa10.68□□□□□ -0.7
CHD3-215ENST00000572750 DAZ3Q9NR90 486 aaKnown RBP10.68□□□□□ -0.7
CHD3-215ENST00000572750 PPP1R2P9O14990 202 aa10.67□□□□□ -0.7
CHD3-215ENST00000572750 GAS8-AS1O95177 125 aa10.67□□□□□ -0.7
CHD3-215ENST00000572750 TNP2Q05952 138 aa10.67□□□□□ -0.7
CHD3-215ENST00000572750 NTM-AS1Q6ZSK4 140 aa10.67□□□□□ -0.7
CHD3-215ENST00000572750 C10orf126Q8N4M7 172 aa10.67□□□□□ -0.7
CHD3-215ENST00000572750 DEFB104AQ8WTQ1 72 aa10.67□□□□□ -0.7
CHD3-215ENST00000572750 RNF185Q96GF1 192 aa10.67□□□□□ -0.7
CHD3-215ENST00000572750 K7EP13 123 aa10.66□□□□□ -0.7
CHD3-215ENST00000572750 CAMPP49913 170 aa10.66□□□□□ -0.7
CHD3-215ENST00000572750 Q6ZRN7 208 aaPredicted RBP10.66□□□□□ -0.7
CHD3-215ENST00000572750 NIT1Q86X76 327 aa10.66□□□□□ -0.7
CHD3-215ENST00000572750 NCR2O95944 276 aa10.65□□□□□ -0.7
CHD3-215ENST00000572750 MT-ND4LP03901 98 aa10.65□□□□□ -0.7
CHD3-215ENST00000572750 ANAPC16Q96DE5 110 aa10.65□□□□□ -0.7
CHD3-215ENST00000572750 SEC11CQ9BY50 192 aa10.65□□□□□ -0.7
CHD3-215ENST00000572750 URGCP-MRPS24S4R325 110 aa10.65□□□□□ -0.7
CHD3-215ENST00000572750 A0A1B0GXF2 115 aa10.64□□□□□ -0.71
CHD3-215ENST00000572750 BTF3P20290 206 aaKnown RBP10.64□□□□□ -0.71
CHD3-215ENST00000572750 RAB4AP20338 218 aa10.64□□□□□ -0.71
CHD3-215ENST00000572750 RPS10P46783 165 aaKnown RBP10.64□□□□□ -0.71
CHD3-215ENST00000572750 FRZBQ92765 325 aa10.64□□□□□ -0.71
CHD3-215ENST00000572750 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
CHD3-215ENST00000572750 Q9HAA7 133 aa10.64□□□□□ -0.71
CHD3-215ENST00000572750 APOBP04114 4563 aaKnown RBP10.64□□□□□ -0.71
CHD3-215ENST00000572750 TRBV25-1A0A075B6N4 114 aa10.63□□□□□ -0.71
CHD3-215ENST00000572750 A0A087WX48 190 aa10.63□□□□□ -0.71
CHD3-215ENST00000572750 A0A1B0GW15 77 aa10.63□□□□□ -0.71
CHD3-215ENST00000572750 IBA57-AS1B1ANH7 110 aa10.63□□□□□ -0.71
CHD3-215ENST00000572750 SMKR1H3BMG3 65 aa10.63□□□□□ -0.71
CHD3-215ENST00000572750 HBBP68871 147 aa10.63□□□□□ -0.71
CHD3-215ENST00000572750 TMEM97Q5BJF2 176 aa10.63□□□□□ -0.71
CHD3-215ENST00000572750 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
CHD3-215ENST00000572750 IQCJQ1A5X6 159 aa10.62□□□□□ -0.71
CHD3-215ENST00000572750 MPV17L2Q567V2 206 aa10.62□□□□□ -0.71
CHD3-215ENST00000572750 KCNIP4Q6PIL6 250 aa10.62□□□□□ -0.71
CHD3-215ENST00000572750 NFE4Q86UQ8 179 aa10.62□□□□□ -0.71
CHD3-215ENST00000572750 MRAP2Q96G30 205 aa10.62□□□□□ -0.71
CHD3-215ENST00000572750 SDHAF1A6NFY7 115 aa10.61□□□□□ -0.71
CHD3-215ENST00000572750 TMEM262E9PQX1 116 aa10.61□□□□□ -0.71
CHD3-215ENST00000572750 GAGE6Q13070 117 aa10.61□□□□□ -0.71
CHD3-215ENST00000572750 COTL1Q14019 142 aa10.61□□□□□ -0.71
CHD3-215ENST00000572750 LAGE3Q14657 143 aa10.61□□□□□ -0.71
CHD3-215ENST00000572750 MRPL51Q4U2R6 128 aaKnown RBP10.61□□□□□ -0.71
CHD3-215ENST00000572750 FAM104BQ5XKR9 115 aa10.61□□□□□ -0.71
CHD3-215ENST00000572750 LRP1BQ9NZR2 4599 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms