RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 RNASE7Q9H1E1 156 aaKnown RBP9.53□□□□□ -0.88
CIITA-205ENST00000571186 TMEM250H0YL14 139 aa9.52□□□□□ -0.89
CIITA-205ENST00000571186 RHODO00212 210 aa9.52□□□□□ -0.89
CIITA-205ENST00000571186 IGLC6P0CF74 106 aa9.52□□□□□ -0.89
CIITA-205ENST00000571186 SPANXN1Q5VSR9 72 aa9.52□□□□□ -0.89
CIITA-205ENST00000571186 LINC00528Q8N1L1 170 aa9.52□□□□□ -0.89
CIITA-205ENST00000571186 ATP6V0E2Q8NHE4 81 aa9.52□□□□□ -0.89
CIITA-205ENST00000571186 SRP19P09132 144 aaKnown RBP9.51□□□□□ -0.89
CIITA-205ENST00000571186 LINC00694P0DN24 101 aa9.51□□□□□ -0.89
CIITA-205ENST00000571186 RPS20P60866 119 aaKnown RBP9.51□□□□□ -0.89
CIITA-205ENST00000571186 FER1L6-AS1Q8NA97 138 aa9.51□□□□□ -0.89
CIITA-205ENST00000571186 DEFB104AQ8WTQ1 72 aa9.51□□□□□ -0.89
CIITA-205ENST00000571186 SRSF3P84103 164 aaKnown RBP9.5□□□□□ -0.89
CIITA-205ENST00000571186 TM2D2Q9BX73 214 aa9.5□□□□□ -0.89
CIITA-205ENST00000571186 BIN3Q9NQY0 253 aa9.5□□□□□ -0.89
CIITA-205ENST00000571186 C9JQL5 133 aa9.49□□□□□ -0.89
CIITA-205ENST00000571186 ZNF56Q15929 161 aa9.49□□□□□ -0.89
CIITA-205ENST00000571186 SERTAD4-AS1Q5TG53 156 aa9.49□□□□□ -0.89
CIITA-205ENST00000571186 LYZL1Q6UWQ5 148 aa9.49□□□□□ -0.89
CIITA-205ENST00000571186 GTSF1LQ9H1H1 148 aa9.49□□□□□ -0.89
CIITA-205ENST00000571186 RPP21Q9H633 154 aaKnown RBP9.49□□□□□ -0.89
CIITA-205ENST00000571186 KIF25-AS1Q9Y6Z4 181 aa9.49□□□□□ -0.89
CIITA-205ENST00000571186 LECT2O14960 151 aa9.48□□□□□ -0.89
CIITA-205ENST00000571186 WFDC2Q14508 124 aa9.48□□□□□ -0.89
CIITA-205ENST00000571186 SMIM7Q9BQ49 75 aa9.48□□□□□ -0.89
CIITA-205ENST00000571186 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.47□□□□□ -0.89
CIITA-205ENST00000571186 XKRY2A2RUG3 117 aa9.47□□□□□ -0.89
CIITA-205ENST00000571186 ZNF727A8MUV8 499 aa9.47□□□□□ -0.89
CIITA-205ENST00000571186 F5H697 171 aa9.47□□□□□ -0.89
CIITA-205ENST00000571186 RAB4BP61018 213 aa9.47□□□□□ -0.89
CIITA-205ENST00000571186 LELP1Q5T871 98 aa9.47□□□□□ -0.89
CIITA-205ENST00000571186 Q6ZSA8 131 aa9.47□□□□□ -0.89
CIITA-205ENST00000571186 Q8N3U1 123 aa9.47□□□□□ -0.89
CIITA-205ENST00000571186 GTSF1Q8WW33 167 aa9.46□□□□□ -0.9
CIITA-205ENST00000571186 AP1S3Q96PC3 154 aa9.46□□□□□ -0.9
CIITA-205ENST00000571186 LRP1Q07954 4544 aaKnown RBP9.45□□□□□ -0.9
CIITA-205ENST00000571186 F2Z2F3 143 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 GATCO43716 136 aaKnown RBP9.45□□□□□ -0.9
CIITA-205ENST00000571186 MGPP08493 103 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 SMIM17P0DL12 118 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 NTF3P20783 257 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 CTRLP40313 264 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 UBE2D3P61077 147 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 UBE2D2P62837 147 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 CACNG7P62955 275 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 LAGE3Q14657 143 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 LINC01620Q4KN68 170 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 LINC01551Q86U37 167 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 NEXN-AS1Q8NBZ9 246 aa9.45□□□□□ -0.9
CIITA-205ENST00000571186 TRBV7-3A0A075B6L6 115 aa9.44□□□□□ -0.9
CIITA-205ENST00000571186 TRBV10-1A0A0K0K1A3 114 aa9.44□□□□□ -0.9
CIITA-205ENST00000571186 NDUFS6O75380 124 aaKnown RBP9.44□□□□□ -0.9
CIITA-205ENST00000571186 RPL36AP83881 106 aaKnown RBP9.44□□□□□ -0.9
CIITA-205ENST00000571186 FAM231DQ6ZW35 169 aa9.44□□□□□ -0.9
CIITA-205ENST00000571186 RPL36ALQ969Q0 106 aaKnown RBP9.44□□□□□ -0.9
CIITA-205ENST00000571186 TRAV8-3A0A0A6YYJ7 113 aa9.43□□□□□ -0.9
CIITA-205ENST00000571186 TWIST1Q15672 202 aa9.43□□□□□ -0.9
CIITA-205ENST00000571186 SCXQ7RTU7 201 aa9.43□□□□□ -0.9
CIITA-205ENST00000571186 OR10G8Q8NGN5 311 aa9.43□□□□□ -0.9
CIITA-205ENST00000571186 BAALCQ8WXS3 180 aa9.43□□□□□ -0.9
CIITA-205ENST00000571186 FOXA3P55318 350 aaPredicted RBP9.42□□□□□ -0.9
CIITA-205ENST00000571186 PEA15Q15121 130 aa9.42□□□□□ -0.9
CIITA-205ENST00000571186 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
CIITA-205ENST00000571186 DAZ4Q86SG3 579 aaKnown RBP9.42□□□□□ -0.9
CIITA-205ENST00000571186 PGLYRP4Q96LB8 373 aa9.42□□□□□ -0.9
CIITA-205ENST00000571186 DAZ3Q9NR90 486 aaKnown RBP9.42□□□□□ -0.9
CIITA-205ENST00000571186 M0QY20 66 aa9.41□□□□□ -0.9
CIITA-205ENST00000571186 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
CIITA-205ENST00000571186 TMEM241Q24JQ0 296 aa9.41□□□□□ -0.9
CIITA-205ENST00000571186 WDR73Q6P4I2 378 aa9.41□□□□□ -0.9
CIITA-205ENST00000571186 A0A087WWC5 75 aa9.4□□□□□ -0.9
CIITA-205ENST00000571186 A8MWL6 223 aa9.4□□□□□ -0.9
CIITA-205ENST00000571186 OXTP01178 125 aa9.4□□□□□ -0.9
CIITA-205ENST00000571186 TRGC1P0CF51 173 aa9.4□□□□□ -0.9
CIITA-205ENST00000571186 ISOC2Q96AB3 205 aa9.4□□□□□ -0.9
CIITA-205ENST00000571186 CHAC1Q9BUX1 264 aa9.4□□□□□ -0.9
CIITA-205ENST00000571186 CNFNQ9BYD5 112 aa9.4□□□□□ -0.9
CIITA-205ENST00000571186 DPH3P1Q9H4G8 78 aa9.4□□□□□ -0.9
CIITA-205ENST00000571186 PLA2G2DQ9UNK4 145 aa9.4□□□□□ -0.9
CIITA-205ENST00000571186 UBR4Q5T4S7 5183 aa9.39□□□□□ -0.91
CIITA-205ENST00000571186 ADIRFQ15847 76 aa9.39□□□□□ -0.91
CIITA-205ENST00000571186 FAM74A3Q4VXF1 159 aa9.39□□□□□ -0.91
CIITA-205ENST00000571186 OSTCQ9NRP0 149 aa9.39□□□□□ -0.91
CIITA-205ENST00000571186 COX11Q9Y6N1 276 aa9.39□□□□□ -0.91
CIITA-205ENST00000571186 V9GYV3 84 aa9.39□□□□□ -0.91
CIITA-205ENST00000571186 TRAV26-2A0A0B4J265 109 aa9.38□□□□□ -0.91
CIITA-205ENST00000571186 CT83Q5H943 113 aa9.38□□□□□ -0.91
CIITA-205ENST00000571186 NTM-AS1Q6ZSK4 140 aa9.38□□□□□ -0.91
CIITA-205ENST00000571186 NIT1Q86X76 327 aa9.38□□□□□ -0.91
CIITA-205ENST00000571186 Q8N976 141 aa9.38□□□□□ -0.91
CIITA-205ENST00000571186 DNAJC30Q96LL9 226 aa9.38□□□□□ -0.91
CIITA-205ENST00000571186 NAT8Q9UHE5 227 aa9.38□□□□□ -0.91
CIITA-205ENST00000571186 TRBV6-8A0A0A6YYG3 113 aa9.37□□□□□ -0.91
CIITA-205ENST00000571186 HIGD1CA8MV81 97 aa9.37□□□□□ -0.91
CIITA-205ENST00000571186 KRTAP10-4P60372 401 aaPredicted RBP9.37□□□□□ -0.91
CIITA-205ENST00000571186 IFITM2Q01629 132 aa9.37□□□□□ -0.91
CIITA-205ENST00000571186 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
CIITA-205ENST00000571186 CIRBP-AS1Q8TBR5 109 aa9.37□□□□□ -0.91
CIITA-205ENST00000571186 TSKUQ8WUA8 353 aa9.37□□□□□ -0.91
CIITA-205ENST00000571186 RMI2Q96E14 147 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms