RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 ATRAIDQ6UW56 229 aa13.55□□□□□ -0.24
LITAF-205ENST00000570904 C15orf54Q8N8G6 183 aa13.55□□□□□ -0.24
LITAF-205ENST00000570904 GZMBP10144 247 aa13.54□□□□□ -0.24
LITAF-205ENST00000570904 Q0VG73 95 aa13.54□□□□□ -0.24
LITAF-205ENST00000570904 ENHOQ6UWT2 76 aa13.54□□□□□ -0.24
LITAF-205ENST00000570904 AP1S3Q96PC3 154 aa13.54□□□□□ -0.24
LITAF-205ENST00000570904 CHCHD5Q9BSY4 110 aa13.54□□□□□ -0.24
LITAF-205ENST00000570904 KIF25-AS1Q9Y6Z4 181 aa13.54□□□□□ -0.24
LITAF-205ENST00000570904 TRAV1-1A0A0B4J248 108 aa13.53□□□□□ -0.24
LITAF-205ENST00000570904 CRPP02741 224 aa13.53□□□□□ -0.24
LITAF-205ENST00000570904 SMIM17P0DL12 118 aa13.53□□□□□ -0.24
LITAF-205ENST00000570904 LINC00528Q8N1L1 170 aa13.53□□□□□ -0.24
LITAF-205ENST00000570904 TPPP3Q9BW30 176 aa13.53□□□□□ -0.24
LITAF-205ENST00000570904 C1orf43Q9BWL3 253 aa13.53□□□□□ -0.24
LITAF-205ENST00000570904 IGLV2-8P01709 118 aa13.52□□□□□ -0.25
LITAF-205ENST00000570904 ANGP03950 147 aaKnown RBP13.52□□□□□ -0.25
LITAF-205ENST00000570904 NTM-AS1Q6ZSK4 140 aa13.52□□□□□ -0.25
LITAF-205ENST00000570904 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.52□□□□□ -0.25
LITAF-205ENST00000570904 RAB19A4D1S5 217 aa13.51□□□□□ -0.25
LITAF-205ENST00000570904 SCXQ7RTU7 201 aa13.51□□□□□ -0.25
LITAF-205ENST00000570904 OR2D3Q8NGH3 330 aa13.51□□□□□ -0.25
LITAF-205ENST00000570904 MGPP08493 103 aa13.5□□□□□ -0.25
LITAF-205ENST00000570904 IGLC6P0CF74 106 aa13.5□□□□□ -0.25
LITAF-205ENST00000570904 RAB5CP51148 216 aa13.5□□□□□ -0.25
LITAF-205ENST00000570904 FER1L6-AS1Q8NA97 138 aa13.5□□□□□ -0.25
LITAF-205ENST00000570904 DAZAP1Q96EP5 407 aaKnown RBP13.5□□□□□ -0.25
LITAF-205ENST00000570904 VAX2Q9UIW0 290 aa13.5□□□□□ -0.25
LITAF-205ENST00000570904 C19orf71A6NCJ1 209 aa13.49□□□□□ -0.25
LITAF-205ENST00000570904 SULT1A2P50226 295 aa13.49□□□□□ -0.25
LITAF-205ENST00000570904 TEX46H3BTG2 121 aa13.48□□□□□ -0.25
LITAF-205ENST00000570904 PLA2G1BP04054 148 aaKnown RBP13.48□□□□□ -0.25
LITAF-205ENST00000570904 GNG4P50150 75 aa13.48□□□□□ -0.25
LITAF-205ENST00000570904 PKIAP61925 76 aa13.48□□□□□ -0.25
LITAF-205ENST00000570904 GAGE6Q13070 117 aa13.48□□□□□ -0.25
LITAF-205ENST00000570904 TMEM97Q5BJF2 176 aa13.48□□□□□ -0.25
LITAF-205ENST00000570904 EIF5AL1Q6IS14 154 aaKnown RBP13.48□□□□□ -0.25
LITAF-205ENST00000570904 HLA-DQA1P01909 254 aa13.47□□□□□ -0.25
LITAF-205ENST00000570904 RPS20P60866 119 aaKnown RBP13.47□□□□□ -0.25
LITAF-205ENST00000570904 MEF2BQ02080 365 aaPredicted RBP13.47□□□□□ -0.25
LITAF-205ENST00000570904 CLPSL2Q6UWE3 100 aa13.47□□□□□ -0.25
LITAF-205ENST00000570904 TRBV20OR9-2A0A075B6H5 130 aa13.46□□□□□ -0.25
LITAF-205ENST00000570904 M0QY20 66 aa13.46□□□□□ -0.25
LITAF-205ENST00000570904 RBX1P62877 108 aa13.46□□□□□ -0.25
LITAF-205ENST00000570904 C14orf177Q52M58 125 aa13.46□□□□□ -0.25
LITAF-205ENST00000570904 SUMO4Q6EEV6 95 aa13.46□□□□□ -0.25
LITAF-205ENST00000570904 CHAC1Q9BUX1 264 aa13.46□□□□□ -0.25
LITAF-205ENST00000570904 TRBV25-1A0A075B6N4 114 aa13.45□□□□□ -0.26
LITAF-205ENST00000570904 USP17L23D6RBM5 183 aa13.45□□□□□ -0.26
LITAF-205ENST00000570904 PDE6DO43924 150 aa13.45□□□□□ -0.26
LITAF-205ENST00000570904 P01737 135 aa13.45□□□□□ -0.26
LITAF-205ENST00000570904 CACNG7P62955 275 aa13.45□□□□□ -0.26
LITAF-205ENST00000570904 MIAQ16674 131 aa13.45□□□□□ -0.26
LITAF-205ENST00000570904 MED9Q9NWA0 146 aa13.45□□□□□ -0.26
LITAF-205ENST00000570904 IFNA1P01562 189 aa13.44□□□□□ -0.26
LITAF-205ENST00000570904 BCL2P10415 239 aa13.44□□□□□ -0.26
LITAF-205ENST00000570904 LINC00269Q8N2A0 174 aa13.44□□□□□ -0.26
LITAF-205ENST00000570904 SMIM12Q96EX1 92 aa13.44□□□□□ -0.26
LITAF-205ENST00000570904 IGHV1-24A0A0C4DH33 117 aa13.43□□□□□ -0.26
LITAF-205ENST00000570904 H7C1H1 209 aa13.43□□□□□ -0.26
LITAF-205ENST00000570904 NKX2-5P52952 324 aaPredicted RBP13.43□□□□□ -0.26
LITAF-205ENST00000570904 IQCJQ1A5X6 159 aa13.43□□□□□ -0.26
LITAF-205ENST00000570904 LYZL1Q6UWQ5 148 aa13.43□□□□□ -0.26
LITAF-205ENST00000570904 TCTE3Q8IZS6 198 aa13.43□□□□□ -0.26
LITAF-205ENST00000570904 CIRBP-AS1Q8TBR5 109 aa13.43□□□□□ -0.26
LITAF-205ENST00000570904 PRR34Q9NV39 138 aa13.43□□□□□ -0.26
LITAF-205ENST00000570904 LRP1Q07954 4544 aaKnown RBP13.42□□□□□ -0.26
LITAF-205ENST00000570904 XKRY2A2RUG3 117 aa13.42□□□□□ -0.26
LITAF-205ENST00000570904 FAT3Q8TDW7 4589 aa13.41□□□□□ -0.26
LITAF-205ENST00000570904 J3QL48 77 aa13.41□□□□□ -0.26
LITAF-205ENST00000570904 SLC51BQ86UW2 128 aa13.41□□□□□ -0.26
LITAF-205ENST00000570904 F2Z2F3 143 aa13.4□□□□□ -0.26
LITAF-205ENST00000570904 PRSS1P07477 247 aa13.4□□□□□ -0.26
LITAF-205ENST00000570904 TRGC1P0CF51 173 aa13.4□□□□□ -0.26
LITAF-205ENST00000570904 KRTAP26-1Q6PEX3 210 aa13.4□□□□□ -0.26
LITAF-205ENST00000570904 RASL11AQ6T310 242 aa13.4□□□□□ -0.26
LITAF-205ENST00000570904 DEFB104AQ8WTQ1 72 aa13.4□□□□□ -0.26
LITAF-205ENST00000570904 BIN3Q9NQY0 253 aa13.4□□□□□ -0.26
LITAF-205ENST00000570904 NTF3P20783 257 aa13.39□□□□□ -0.27
LITAF-205ENST00000570904 NUDT10Q8NFP7 164 aa13.39□□□□□ -0.27
LITAF-205ENST00000570904 NUDT11Q96G61 164 aa13.39□□□□□ -0.27
LITAF-205ENST00000570904 DPH3P1Q9H4G8 78 aa13.39□□□□□ -0.27
LITAF-205ENST00000570904 IGLV10-54A0A075B6I4 117 aa13.38□□□□□ -0.27
LITAF-205ENST00000570904 C20orf203Q8NBC4 194 aa13.38□□□□□ -0.27
LITAF-205ENST00000570904 TMEM243Q9BU79 118 aa13.38□□□□□ -0.27
LITAF-205ENST00000570904 PKHD1L1Q86WI1 4243 aa13.38□□□□□ -0.27
LITAF-205ENST00000570904 CTRLP40313 264 aa13.37□□□□□ -0.27
LITAF-205ENST00000570904 KRTAP10-4P60372 401 aaPredicted RBP13.37□□□□□ -0.27
LITAF-205ENST00000570904 REG3AQ06141 175 aa13.37□□□□□ -0.27
LITAF-205ENST00000570904 RNASE7Q9H1E1 156 aaKnown RBP13.37□□□□□ -0.27
LITAF-205ENST00000570904 IGLV4-60A0A075B6I1 120 aa13.36□□□□□ -0.27
LITAF-205ENST00000570904 C9orf62Q8N4C0 152 aa13.36□□□□□ -0.27
LITAF-205ENST00000570904 GFRA4Q9GZZ7 299 aa13.36□□□□□ -0.27
LITAF-205ENST00000570904 NIT2Q9NQR4 276 aa13.36□□□□□ -0.27
LITAF-205ENST00000570904 K7EN84 100 aa13.35□□□□□ -0.27
LITAF-205ENST00000570904 RPP21Q9H633 154 aaKnown RBP13.35□□□□□ -0.27
LITAF-205ENST00000570904 KRTAP29-1A8MX34 341 aaPredicted RBP13.34□□□□□ -0.27
LITAF-205ENST00000570904 TAGLN2P37802 199 aaKnown RBP13.34□□□□□ -0.27
LITAF-205ENST00000570904 TWIST1Q15672 202 aa13.34□□□□□ -0.27
LITAF-205ENST00000570904 WDR73Q6P4I2 378 aa13.34□□□□□ -0.27
LITAF-205ENST00000570904 PGLYRP4Q96LB8 373 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms