RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 PMCHL1Q16048 86 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 PSMG4Q5JS54 123 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 EBLN2Q6P2I7 272 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 PHF5AQ7RTV0 110 aaKnown RBP2.63□□□□□ -1.99
SMG6-208ENST00000570874 ZNF329Q86UD4 541 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 PDPNQ86YL7 162 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 MAPK1IP1LQ8NDC0 245 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 WFDC11Q8NEX6 87 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 C10orf105Q8TEF2 133 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 URB1-AS1Q96HZ7 61 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 SHANK2-AS3Q9BTD1 123 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 NPCDR1Q9BY65 106 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 C16orf95Q9H693 158 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 ZNF702PQ9H963 129 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 TMEM14BQ9NUH8 114 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 IL36BQ9NZH7 164 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 MRPL36Q9P0J6 103 aaKnown RBP2.63□□□□□ -1.99
SMG6-208ENST00000570874 ITPR1Q14643 2758 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 ANKRD17O75179 2603 aaKnown RBP2.62□□□□□ -1.99
SMG6-208ENST00000570874 IGSF10Q6WRI0 2623 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 CSPG4Q6UVK1 2322 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 IGHV3-21A0A0B4J1V1 117 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 KRTAP23-1A1A580 65 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 M0R1W7 72 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 HYPMO75409 117 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 NXPH4O95158 308 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 PLA2G2AP14555 144 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 COX6B1P14854 86 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 COX7CP15954 63 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 S100A4P26447 101 aaKnown RBP2.62□□□□□ -1.99
SMG6-208ENST00000570874 HLA-DMBP28068 263 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 GNB1P62873 340 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 CXCL6P80162 114 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 PRCDQ00LT1 54 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 WT1-ASQ06250 92 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 GFI1BQ5VTD9 330 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 MIC13Q5XKP0 118 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 LINC00173Q6ZV60 143 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 SIGLECL1Q8N7X8 197 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 NKAPP1Q8N9T2 125 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 OR8A1Q8NGG7 326 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 CMTM2Q8TAZ6 248 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 TMEM167AQ8TBQ9 72 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 FAM168AQ92567 244 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 TIMM17AQ99595 171 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 MGST2Q99735 147 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 FAM103A1Q9BTL3 118 aaKnown RBP2.62□□□□□ -1.99
SMG6-208ENST00000570874 OSTCQ9NRP0 149 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 S4R3C0 116 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 AGRNO00468 2067 aa2.62□□□□□ -1.99
SMG6-208ENST00000570874 CELSR1Q9NYQ6 3014 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 FAM208BQ5VWN6 2430 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 IGLV5-37A0A075B6J1 123 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 IGKV1OR2-108A0A075B7D4 117 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 A0A096LNT2 108 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 IGLV5-52A0A0A0MRZ9 124 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 IGHV7-81A0A0B4J1V7 117 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 TRAV40A0A0B4J280 105 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 IGHV3-38A0A0C4DH36 116 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 A0A1B0GW54 56 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 LINC01548A6NM66 108 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 INS-IGF2F8WCM5 200 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 TMEM256-PLSCR3K7ERE1 68 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 ZNF253O75346 499 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 TSHBP01222 138 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 CSN1S1P47710 185 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 NPC2P61916 151 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 UBE2BP63146 152 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 NDPQ00604 133 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 SUMO4Q6EEV6 95 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 BRD3OSQ6XYD6 125 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 SCXQ7RTU7 201 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 BAGE3Q86Y29 109 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 BAGE2Q86Y30 109 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 OR10AG1Q8NH19 301 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 PRELID3AQ96N28 172 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 SLC25A2Q9BXI2 301 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 NDUFA4L2Q9NRX3 87 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 DPM3Q9P2X0 92 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 ZNF706Q9Y5V0 76 aaPredicted RBP2.61□□□□□ -1.99
SMG6-208ENST00000570874 SPCS1Q9Y6A9 102 aa2.61□□□□□ -1.99
SMG6-208ENST00000570874 CRYBG3Q68DQ2 2970 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 IGKV1D-37A0A075B6S9 117 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 NDUFA3O95167 84 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 LTAP01374 205 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 IGHV3-23P01764 117 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 RNASE1P07998 156 aaKnown RBP2.6□□□□□ -1.99
SMG6-208ENST00000570874 PRB4P10163 310 aaPredicted RBP2.6□□□□□ -1.99
SMG6-208ENST00000570874 RPL27AP46776 148 aaKnown RBP2.6□□□□□ -1.99
SMG6-208ENST00000570874 SNRPD3P62318 126 aaKnown RBP2.6□□□□□ -1.99
SMG6-208ENST00000570874 PLGLAQ15195 96 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 TWIST1Q15672 202 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 SPATA45Q537H7 98 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 C2orf83Q53S99 150 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 BVES-AS1Q5T3Y7 98 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 LGALS9CQ6DKI2 356 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 GPHB5Q86YW7 130 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 PCP2Q8IVA1 136 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 Q8N6K4 173 aa2.6□□□□□ -1.99
SMG6-208ENST00000570874 Q8N9W7 124 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms