RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 hDV102S1A0JD36 115 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 MAP1LC3B2A6NCE7 125 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 LTAP01374 205 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 SLPIP03973 132 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 DGAT2L7PQ6IED9 249 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 COX8CQ7Z4L0 72 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 DERL1Q9BUN8 251 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 MAP1LC3BQ9GZQ8 125 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 GFRA4Q9GZZ7 299 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 PRR34Q9NV39 138 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 RNF213Q63HN8 5207 aa7.67□□□□□ -1.18
CAPN3-220ENST00000569827 A0A087WYN8 130 aa7.66□□□□□ -1.18
CAPN3-220ENST00000569827 TRBV6-1A0A0K0K1D8 114 aa7.66□□□□□ -1.18
CAPN3-220ENST00000569827 FHITP49789 147 aa7.66□□□□□ -1.18
CAPN3-220ENST00000569827 AKR1C8PQ5T2L2 129 aa7.66□□□□□ -1.18
CAPN3-220ENST00000569827 Q6ZRU5 148 aa7.66□□□□□ -1.18
CAPN3-220ENST00000569827 DPH3Q96FX2 82 aa7.66□□□□□ -1.18
CAPN3-220ENST00000569827 ZNF471Q9BX82 626 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-220ENST00000569827 A0A0D9SG52 128 aa7.65□□□□□ -1.18
CAPN3-220ENST00000569827 PHOX2AO14813 284 aa7.65□□□□□ -1.18
CAPN3-220ENST00000569827 REG3AQ06141 175 aa7.65□□□□□ -1.18
CAPN3-220ENST00000569827 MED28Q9H204 178 aa7.65□□□□□ -1.18
CAPN3-220ENST00000569827 IGLV4-60A0A075B6I1 120 aa7.64□□□□□ -1.19
CAPN3-220ENST00000569827 TRBV25-1A0A075B6N4 114 aa7.64□□□□□ -1.19
CAPN3-220ENST00000569827 BORCS7-ASMTA0A0B4J1R7 106 aa7.64□□□□□ -1.19
CAPN3-220ENST00000569827 SCO2A0A1W2PP80 73 aa7.64□□□□□ -1.19
CAPN3-220ENST00000569827 PAGE4O60829 102 aa7.64□□□□□ -1.19
CAPN3-220ENST00000569827 MGPP08493 103 aa7.64□□□□□ -1.19
CAPN3-220ENST00000569827 CIRBPQ14011 172 aaKnown RBP7.64□□□□□ -1.19
CAPN3-220ENST00000569827 SPANXN1Q5VSR9 72 aa7.64□□□□□ -1.19
CAPN3-220ENST00000569827 C20orf203Q8NBC4 194 aa7.64□□□□□ -1.19
CAPN3-220ENST00000569827 INO80EQ8NBZ0 244 aaPredicted RBP7.64□□□□□ -1.19
CAPN3-220ENST00000569827 STOML3Q8TAV4 291 aa7.64□□□□□ -1.19
CAPN3-220ENST00000569827 LPAP08519 4548 aa7.63□□□□□ -1.19
CAPN3-220ENST00000569827 A6NHS1 94 aa7.63□□□□□ -1.19
CAPN3-220ENST00000569827 SNAI2O43623 268 aa7.63□□□□□ -1.19
CAPN3-220ENST00000569827 GZMBP10144 247 aa7.63□□□□□ -1.19
CAPN3-220ENST00000569827 CNBPP62633 177 aaKnown RBP7.63□□□□□ -1.19
CAPN3-220ENST00000569827 SPACA4Q8TDM5 124 aa7.63□□□□□ -1.19
CAPN3-220ENST00000569827 NKX6-2Q9C056 277 aaPredicted RBP7.63□□□□□ -1.19
CAPN3-220ENST00000569827 VAX2Q9UIW0 290 aa7.63□□□□□ -1.19
CAPN3-220ENST00000569827 KIF25-AS1Q9Y6Z4 181 aa7.63□□□□□ -1.19
CAPN3-220ENST00000569827 IGHV3-64A0A075B6Q5 118 aa7.62□□□□□ -1.19
CAPN3-220ENST00000569827 PKIAP61925 76 aa7.62□□□□□ -1.19
CAPN3-220ENST00000569827 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-220ENST00000569827 IGHV1-24A0A0C4DH33 117 aa7.61□□□□□ -1.19
CAPN3-220ENST00000569827 IGKV2-24A0A0C4DH68 120 aa7.61□□□□□ -1.19
CAPN3-220ENST00000569827 IGKV3OR2-268A0A0C4DH90 116 aa7.61□□□□□ -1.19
CAPN3-220ENST00000569827 SMIM17P0DL12 118 aa7.61□□□□□ -1.19
CAPN3-220ENST00000569827 NKX2-5P52952 324 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-220ENST00000569827 HIGD2BQ4VC39 106 aa7.61□□□□□ -1.19
CAPN3-220ENST00000569827 SUMO4Q6EEV6 95 aa7.61□□□□□ -1.19
CAPN3-220ENST00000569827 CLRN3Q8NCR9 226 aa7.61□□□□□ -1.19
CAPN3-220ENST00000569827 TPPP3Q9BW30 176 aa7.61□□□□□ -1.19
CAPN3-220ENST00000569827 SSBP4Q9BWG4 385 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-220ENST00000569827 CYTL1Q9NRR1 136 aa7.61□□□□□ -1.19
CAPN3-220ENST00000569827 AP5S1Q9NUS5 200 aa7.61□□□□□ -1.19
CAPN3-220ENST00000569827 G3V3Q6 166 aa7.6□□□□□ -1.19
CAPN3-220ENST00000569827 GIPP09681 153 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-220ENST00000569827 OR5AL1P0C617 328 aa7.6□□□□□ -1.19
CAPN3-220ENST00000569827 COX6A2Q02221 97 aa7.6□□□□□ -1.19
CAPN3-220ENST00000569827 IQCJQ1A5X6 159 aa7.6□□□□□ -1.19
CAPN3-220ENST00000569827 BAGE2Q86Y30 109 aa7.6□□□□□ -1.19
CAPN3-220ENST00000569827 C15orf56Q8N910 161 aa7.6□□□□□ -1.19
CAPN3-220ENST00000569827 LYPD6BQ8NI32 183 aa7.6□□□□□ -1.19
CAPN3-220ENST00000569827 GTSF1Q8WW33 167 aa7.6□□□□□ -1.19
CAPN3-220ENST00000569827 AP1S3Q96PC3 154 aa7.6□□□□□ -1.19
CAPN3-220ENST00000569827 DPH3P1Q9H4G8 78 aa7.6□□□□□ -1.19
CAPN3-220ENST00000569827 SMLR1H3BR10 107 aa7.59□□□□□ -1.19
CAPN3-220ENST00000569827 M0QY20 66 aa7.59□□□□□ -1.19
CAPN3-220ENST00000569827 ARPC5O15511 151 aa7.59□□□□□ -1.19
CAPN3-220ENST00000569827 CXCL1P09341 107 aa7.59□□□□□ -1.19
CAPN3-220ENST00000569827 MAJINQ3KP22 176 aa7.59□□□□□ -1.19
CAPN3-220ENST00000569827 TMEM97Q5BJF2 176 aa7.59□□□□□ -1.19
CAPN3-220ENST00000569827 PRSS3P2Q8NHM4 247 aa7.59□□□□□ -1.19
CAPN3-220ENST00000569827 TMEM243Q9BU79 118 aa7.59□□□□□ -1.19
CAPN3-220ENST00000569827 MLST8Q9BVC4 326 aa7.59□□□□□ -1.19
CAPN3-220ENST00000569827 PLAC8Q9NZF1 115 aa7.59□□□□□ -1.19
CAPN3-220ENST00000569827 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-220ENST00000569827 GAGE12HA6NDE8 117 aa7.58□□□□□ -1.2
CAPN3-220ENST00000569827 PRR3P79522 188 aaKnown RBP7.58□□□□□ -1.2
CAPN3-220ENST00000569827 FAM213BQ8TBF2 198 aa7.58□□□□□ -1.2
CAPN3-220ENST00000569827 SULT1A2P50226 295 aa7.57□□□□□ -1.2
CAPN3-220ENST00000569827 C7orf33Q8WU49 177 aa7.57□□□□□ -1.2
CAPN3-220ENST00000569827 SFT2D1Q8WV19 159 aa7.57□□□□□ -1.2
CAPN3-220ENST00000569827 RNF185Q96GF1 192 aa7.57□□□□□ -1.2
CAPN3-220ENST00000569827 TCEAL7Q9BRU2 100 aa7.57□□□□□ -1.2
CAPN3-220ENST00000569827 TRAV8-4A0A0B4J246 113 aa7.56□□□□□ -1.2
CAPN3-220ENST00000569827 UBE2L6O14933 153 aa7.56□□□□□ -1.2
CAPN3-220ENST00000569827 P01737 135 aa7.56□□□□□ -1.2
CAPN3-220ENST00000569827 LINC01600Q96MT4 127 aa7.56□□□□□ -1.2
CAPN3-220ENST00000569827 A0A096LNI7 61 aa7.55□□□□□ -1.2
CAPN3-220ENST00000569827 PFDN1O60925 122 aa7.55□□□□□ -1.2
CAPN3-220ENST00000569827 IGLC6P0CF74 106 aa7.55□□□□□ -1.2
CAPN3-220ENST00000569827 RPL35P42766 123 aaKnown RBP7.55□□□□□ -1.2
CAPN3-220ENST00000569827 STPG4Q8N801 248 aa7.55□□□□□ -1.2
CAPN3-220ENST00000569827 FER1L6-AS1Q8NA97 138 aa7.55□□□□□ -1.2
CAPN3-220ENST00000569827 LINC00526Q96FQ7 95 aa7.55□□□□□ -1.2
CAPN3-220ENST00000569827 A0A1B0GUV1 79 aa7.54□□□□□ -1.2
CAPN3-220ENST00000569827 S100A9P06702 114 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms