RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 TMEM97Q5BJF2 176 aa6.66□□□□□ -1.34
CLN6-209ENST00000569336 KCNIP4Q6PIL6 250 aa6.66□□□□□ -1.34
CLN6-209ENST00000569336 SMIM15Q7Z3B0 74 aa6.66□□□□□ -1.34
CLN6-209ENST00000569336 C15orf54Q8N8G6 183 aa6.66□□□□□ -1.34
CLN6-209ENST00000569336 KIF25-AS1Q9Y6Z4 181 aa6.66□□□□□ -1.34
CLN6-209ENST00000569336 ABCA13Q86UQ4 5058 aa6.66□□□□□ -1.34
CLN6-209ENST00000569336 DNAH11Q96DT5 4516 aa6.65□□□□□ -1.34
CLN6-209ENST00000569336 PKIAP61925 76 aa6.65□□□□□ -1.34
CLN6-209ENST00000569336 TWIST1Q15672 202 aa6.65□□□□□ -1.34
CLN6-209ENST00000569336 DAZ4Q86SG3 579 aaKnown RBP6.65□□□□□ -1.34
CLN6-209ENST00000569336 NEXN-AS1Q8NBZ9 246 aa6.65□□□□□ -1.34
CLN6-209ENST00000569336 DNAJC30Q96LL9 226 aa6.65□□□□□ -1.34
CLN6-209ENST00000569336 CHCHD7Q9BUK0 85 aa6.65□□□□□ -1.34
CLN6-209ENST00000569336 GFRA4Q9GZZ7 299 aa6.65□□□□□ -1.34
CLN6-209ENST00000569336 DAZ3Q9NR90 486 aaKnown RBP6.65□□□□□ -1.34
CLN6-209ENST00000569336 Q9UF83 564 aa6.65□□□□□ -1.34
CLN6-209ENST00000569336 A0A087WX48 190 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 FAM231BA6NCW3 169 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 IBA57-AS1B1ANH7 110 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 PSCAO43653 123 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 IGHV3-30P01768 117 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 IGHV3-33P01772 117 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 IGHV3-30-3P0DP02 117 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 IGHV3-30-5P0DP03 117 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 TMEM241Q24JQ0 296 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 SUMO4Q6EEV6 95 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 Q6ZRN7 208 aaPredicted RBP6.64□□□□□ -1.35
CLN6-209ENST00000569336 OSTCQ9NRP0 149 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 NAT8Q9UHE5 227 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 TNFRSF18Q9Y5U5 241 aa6.64□□□□□ -1.35
CLN6-209ENST00000569336 TRBV6-8A0A0A6YYG3 113 aa6.63□□□□□ -1.35
CLN6-209ENST00000569336 TRAV8-3A0A0A6YYJ7 113 aa6.63□□□□□ -1.35
CLN6-209ENST00000569336 ELOBQ15370 118 aa6.63□□□□□ -1.35
CLN6-209ENST00000569336 ADIRFQ15847 76 aa6.63□□□□□ -1.35
CLN6-209ENST00000569336 RASL11AQ6T310 242 aa6.63□□□□□ -1.35
CLN6-209ENST00000569336 TSKUQ8WUA8 353 aa6.63□□□□□ -1.35
CLN6-209ENST00000569336 GTSF1Q8WW33 167 aa6.63□□□□□ -1.35
CLN6-209ENST00000569336 FRZBQ92765 325 aa6.63□□□□□ -1.35
CLN6-209ENST00000569336 TRBV25-1A0A075B6N4 114 aa6.62□□□□□ -1.35
CLN6-209ENST00000569336 HIGD1CA8MV81 97 aa6.62□□□□□ -1.35
CLN6-209ENST00000569336 M0QY20 66 aa6.62□□□□□ -1.35
CLN6-209ENST00000569336 NIT1Q86X76 327 aa6.62□□□□□ -1.35
CLN6-209ENST00000569336 ISOC2Q96AB3 205 aa6.62□□□□□ -1.35
CLN6-209ENST00000569336 RMI2Q96E14 147 aa6.62□□□□□ -1.35
CLN6-209ENST00000569336 PGLYRP4Q96LB8 373 aa6.62□□□□□ -1.35
CLN6-209ENST00000569336 Q9HAA7 133 aa6.62□□□□□ -1.35
CLN6-209ENST00000569336 DYNC1H1Q14204 4646 aaKnown RBP6.61□□□□□ -1.35
CLN6-209ENST00000569336 A0A1B0GUT8 65 aa6.61□□□□□ -1.35
CLN6-209ENST00000569336 C16orf90A8MZG2 172 aa6.61□□□□□ -1.35
CLN6-209ENST00000569336 FOXA3P55318 350 aaPredicted RBP6.61□□□□□ -1.35
CLN6-209ENST00000569336 RPL23P62829 140 aaKnown RBP6.61□□□□□ -1.35
CLN6-209ENST00000569336 CDPF1Q6NVV7 123 aa6.61□□□□□ -1.35
CLN6-209ENST00000569336 SPATA12Q7Z6I5 190 aa6.61□□□□□ -1.35
CLN6-209ENST00000569336 TM2D2Q9BX73 214 aa6.61□□□□□ -1.35
CLN6-209ENST00000569336 NIT2Q9NQR4 276 aa6.61□□□□□ -1.35
CLN6-209ENST00000569336 COX11Q9Y6N1 276 aa6.61□□□□□ -1.35
CLN6-209ENST00000569336 IGHV1-24A0A0C4DH33 117 aa6.6□□□□□ -1.35
CLN6-209ENST00000569336 CHCHD5Q9BSY4 110 aa6.6□□□□□ -1.35
CLN6-209ENST00000569336 NAT8BQ9UHF3 227 aa6.6□□□□□ -1.35
CLN6-209ENST00000569336 V9GYV3 84 aa6.6□□□□□ -1.35
CLN6-209ENST00000569336 C9JQL5 133 aa6.59□□□□□ -1.35
CLN6-209ENST00000569336 TMEM262E9PQX1 116 aa6.59□□□□□ -1.35
CLN6-209ENST00000569336 CRPP02741 224 aa6.59□□□□□ -1.35
CLN6-209ENST00000569336 SRSF3P84103 164 aaKnown RBP6.59□□□□□ -1.35
CLN6-209ENST00000569336 Q0VG73 95 aa6.59□□□□□ -1.35
CLN6-209ENST00000569336 RIGQ13278 110 aa6.59□□□□□ -1.35
CLN6-209ENST00000569336 IQCJQ1A5X6 159 aa6.59□□□□□ -1.35
CLN6-209ENST00000569336 DNAH5Q8TE73 4624 aa6.58□□□□□ -1.36
CLN6-209ENST00000569336 A0A087WTM6 91 aa6.58□□□□□ -1.36
CLN6-209ENST00000569336 A0A1B0GW15 77 aa6.58□□□□□ -1.36
CLN6-209ENST00000569336 PNRC1Q12796 327 aaPredicted RBP6.58□□□□□ -1.36
CLN6-209ENST00000569336 COTL1Q14019 142 aa6.58□□□□□ -1.36
CLN6-209ENST00000569336 CLLU1Q5K131 121 aa6.58□□□□□ -1.36
CLN6-209ENST00000569336 Q8N3U1 123 aa6.58□□□□□ -1.36
CLN6-209ENST00000569336 KRTAP4-5Q9BYR2 181 aa6.58□□□□□ -1.36
CLN6-209ENST00000569336 TMEM191AQ9H0A3 160 aa6.58□□□□□ -1.36
CLN6-209ENST00000569336 PGPEP1Q9NXJ5 209 aa6.58□□□□□ -1.36
CLN6-209ENST00000569336 KLK12Q9UKR0 248 aa6.58□□□□□ -1.36
CLN6-209ENST00000569336 TRAV26-2A0A0B4J265 109 aa6.57□□□□□ -1.36
CLN6-209ENST00000569336 UBE2L6O14933 153 aa6.57□□□□□ -1.36
CLN6-209ENST00000569336 PPP1R2P9O14990 202 aa6.57□□□□□ -1.36
CLN6-209ENST00000569336 ANGP03950 147 aaKnown RBP6.57□□□□□ -1.36
CLN6-209ENST00000569336 S100A8P05109 93 aa6.57□□□□□ -1.36
CLN6-209ENST00000569336 MPV17L2Q567V2 206 aa6.57□□□□□ -1.36
CLN6-209ENST00000569336 GATD1Q8NB37 220 aa6.57□□□□□ -1.36
CLN6-209ENST00000569336 NUP35Q8NFH5 326 aa6.57□□□□□ -1.36
CLN6-209ENST00000569336 MRAP2Q96G30 205 aa6.57□□□□□ -1.36
CLN6-209ENST00000569336 TMEM243Q9BU79 118 aa6.57□□□□□ -1.36
CLN6-209ENST00000569336 IGKV2D-24A0A075B6R9 120 aa6.56□□□□□ -1.36
CLN6-209ENST00000569336 SMIM27A0A1W2PRY6 76 aa6.56□□□□□ -1.36
CLN6-209ENST00000569336 NCR2O95944 276 aa6.56□□□□□ -1.36
CLN6-209ENST00000569336 PPP1R17O96001 155 aa6.56□□□□□ -1.36
CLN6-209ENST00000569336 AMTP48728 403 aa6.56□□□□□ -1.36
CLN6-209ENST00000569336 MIAQ16674 131 aa6.56□□□□□ -1.36
CLN6-209ENST00000569336 NTM-AS1Q6ZSK4 140 aa6.56□□□□□ -1.36
CLN6-209ENST00000569336 NTN5Q8WTR8 489 aaPredicted RBP6.56□□□□□ -1.36
CLN6-209ENST00000569336 UBE2WQ96B02 151 aa6.56□□□□□ -1.36
CLN6-209ENST00000569336 C1orf43Q9BWL3 253 aa6.56□□□□□ -1.36
CLN6-209ENST00000569336 CDK2AP2O75956 126 aa6.55□□□□□ -1.36
CLN6-209ENST00000569336 APCSP02743 223 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms