RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 TMEM252Q8N6L7 170 aa3.51□□□□□ -1.85
CDH13-211ENST00000568770 C15orf54Q8N8G6 183 aa3.51□□□□□ -1.85
CDH13-211ENST00000568770 MITD1Q8WV92 249 aa3.51□□□□□ -1.85
CDH13-211ENST00000568770 DEDD2Q8WXF8 326 aa3.51□□□□□ -1.85
CDH13-211ENST00000568770 JPT2Q9H910 190 aa3.51□□□□□ -1.85
CDH13-211ENST00000568770 LYRM2Q9NU23 88 aaPredicted RBP3.51□□□□□ -1.85
CDH13-211ENST00000568770 KIF25-AS1Q9Y6Z4 181 aa3.51□□□□□ -1.85
CDH13-211ENST00000568770 V9GYH0 126 aa3.51□□□□□ -1.85
CDH13-211ENST00000568770 IGLV7-46A0A075B6I9 117 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 TMEM262E9PQX1 116 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 TAAR5O14804 337 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 ANGP03950 147 aaKnown RBP3.5□□□□□ -1.85
CDH13-211ENST00000568770 PVALBP20472 110 aaPredicted RBP3.5□□□□□ -1.85
CDH13-211ENST00000568770 S100A10P60903 97 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 PRR3P79522 188 aaKnown RBP3.5□□□□□ -1.85
CDH13-211ENST00000568770 SRSF9Q13242 221 aaKnown RBP eCLIP3.5□□□□□ -1.85
CDH13-211ENST00000568770 ATP6V1FQ16864 119 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 LGALSLQ3ZCW2 172 aaPredicted RBP3.5□□□□□ -1.85
CDH13-211ENST00000568770 MPV17L2Q567V2 206 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 OR10G7Q8NGN6 311 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 OR2G3Q8NGZ4 309 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 CMTM2Q8TAZ6 248 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 SPACA4Q8TDM5 124 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 C7orf33Q8WU49 177 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 RNF185Q96GF1 192 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 OTORQ9NRC9 128 aa3.5□□□□□ -1.85
CDH13-211ENST00000568770 IGHV3-64A0A075B6Q5 118 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 NAP1L6A6NFF2 107 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 H7C423 109 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 EIF3GO75821 320 aaKnown RBP eCLIP3.49□□□□□ -1.85
CDH13-211ENST00000568770 GCGP01275 180 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 CNBPP62633 177 aaKnown RBP3.49□□□□□ -1.85
CDH13-211ENST00000568770 GNG5P63218 68 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 MIAQ16674 131 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 KHDC3LQ587J8 217 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 FAM74A1Q5RGS3 127 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 FAM74A4Q5TZK3 123 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 KRTAP26-1Q6PEX3 210 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 REG3GQ6UW15 175 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 PET117Q6UWS5 81 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 OR5C1Q8NGR4 320 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 GTSF1Q8WW33 167 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 ALKBH7Q9BT30 221 aaPredicted RBP3.49□□□□□ -1.85
CDH13-211ENST00000568770 PLAC8Q9NZF1 115 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 MBD2Q9UBB5 411 aa3.49□□□□□ -1.85
CDH13-211ENST00000568770 TRBV7-3A0A075B6L6 115 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 TRBV6-8A0A0A6YYG3 113 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 IGKV3D-20A0A0C4DH25 116 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 S100A4P26447 101 aaKnown RBP3.48□□□□□ -1.85
CDH13-211ENST00000568770 BTCP35070 178 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 TMBIM6P55061 237 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 UBE2D3P61077 147 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 UBE2D2P62837 147 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 CLPSL2Q6UWE3 100 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 SPINK6Q6UWN8 80 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 NDFIP1Q9BT67 221 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 WDR61Q9GZS3 305 aaKnown RBP3.48□□□□□ -1.85
CDH13-211ENST00000568770 KCNIP2Q9NS61 270 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 OR5AC2Q9NZP5 309 aa3.48□□□□□ -1.85
CDH13-211ENST00000568770 IGLV10-54A0A075B6I4 117 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 A0A087WZ39 114 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 MUC21A0A0G2JKD1 596 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 A0A0U1RQV1 116 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 C17orf112F2Z3M2 114 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 TAS2R45P59539 299 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 IL15RAQ13261 267 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 COX8CQ7Z4L0 72 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 PRNTQ86SH4 94 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 LINC00269Q8N2A0 174 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 ARL6IP6Q8N6S5 226 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 LYPD6BQ8NI32 183 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 CHCHD5Q9BSY4 110 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 MRPS26Q9BYN8 205 aaKnown RBP3.47□□□□□ -1.85
CDH13-211ENST00000568770 PRR34Q9NV39 138 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 IL36BQ9NZH7 164 aa3.47□□□□□ -1.85
CDH13-211ENST00000568770 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.46□□□□□ -1.86
CDH13-211ENST00000568770 TRBV10-1A0A0K0K1A3 114 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 A4D1N5 150 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 CENPXA8MT69 81 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 H3BMQ9 156 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 H3BVH4 76 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 PTTG1O95997 202 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 TCRBP04435 133 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 TCRAP04437 139 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 S100A5P33763 92 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 COX6A2Q02221 97 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 MAJINQ3KP22 176 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 SMUG1Q53HV7 270 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 TRIQKQ629K1 86 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 SFRP2Q96HF1 295 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 PSG8Q9UQ74 426 aa3.46□□□□□ -1.86
CDH13-211ENST00000568770 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 TRAV6A0A075B6T7 132 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 IGKV2-24A0A0C4DH68 120 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 SERTM2A0A1B0GWG4 89 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 K7EQM0 130 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 HMGB3O15347 200 aaKnown RBP3.45□□□□□ -1.86
CDH13-211ENST00000568770 ARMS2P0C7Q2 107 aa3.45□□□□□ -1.86
CDH13-211ENST00000568770 RAB5CP51148 216 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms