RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 UBE2D2P62837 147 aa6.37□□□□□ -1.39
SF3B3-211ENST00000568291 SRSF3P84103 164 aaKnown RBP6.37□□□□□ -1.39
SF3B3-211ENST00000568291 LINC01556Q5JQF7 62 aa6.37□□□□□ -1.39
SF3B3-211ENST00000568291 A0A087WTM6 91 aa6.36□□□□□ -1.39
SF3B3-211ENST00000568291 IBA57-AS1B1ANH7 110 aa6.36□□□□□ -1.39
SF3B3-211ENST00000568291 EPM2AB3EWF7 344 aa6.36□□□□□ -1.39
SF3B3-211ENST00000568291 SRP19P09132 144 aaKnown RBP6.36□□□□□ -1.39
SF3B3-211ENST00000568291 SMIM17P0DL12 118 aa6.36□□□□□ -1.39
SF3B3-211ENST00000568291 TAGLN2P37802 199 aaKnown RBP6.36□□□□□ -1.39
SF3B3-211ENST00000568291 ERVFC1-1P60608 527 aa6.36□□□□□ -1.39
SF3B3-211ENST00000568291 RPS20P60866 119 aaKnown RBP6.36□□□□□ -1.39
SF3B3-211ENST00000568291 RPL36AP83881 106 aaKnown RBP6.36□□□□□ -1.39
SF3B3-211ENST00000568291 GTSF1Q8WW33 167 aa6.36□□□□□ -1.39
SF3B3-211ENST00000568291 RPL36ALQ969Q0 106 aaKnown RBP6.36□□□□□ -1.39
SF3B3-211ENST00000568291 RPP21Q9H633 154 aaKnown RBP6.36□□□□□ -1.39
SF3B3-211ENST00000568291 FLG2Q5D862 2391 aaPredicted RBP6.35□□□□□ -1.39
SF3B3-211ENST00000568291 TRBV7-3A0A075B6L6 115 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 TMEM250H0YL14 139 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 LECT2O14960 151 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 TWIST1Q15672 202 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 SUMO4Q6EEV6 95 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 NTM-AS1Q6ZSK4 140 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 SMIM12Q96EX1 92 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 PGLYRP4Q96LB8 373 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 FAM210AQ96ND0 272 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 SMIM7Q9BQ49 75 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 DNAH5Q8TE73 4624 aa6.35□□□□□ -1.39
SF3B3-211ENST00000568291 TRAV26-2A0A0B4J265 109 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 XKRY2A2RUG3 117 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 TMEM262E9PQX1 116 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 M0QY20 66 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 PSCAO43653 123 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 GATCO43716 136 aaKnown RBP6.34□□□□□ -1.39
SF3B3-211ENST00000568291 WFDC2Q14508 124 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 CDPF1Q6NVV7 123 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 TEX261Q6UWH6 196 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 NFE4Q86UQ8 179 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 NIT1Q86X76 327 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 C10orf126Q8N4M7 172 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 OR10G8Q8NGN5 311 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 KLK12Q9UKR0 248 aa6.34□□□□□ -1.39
SF3B3-211ENST00000568291 A0A087WWC5 75 aa6.33□□□□□ -1.4
SF3B3-211ENST00000568291 ZNF727A8MUV8 499 aa6.33□□□□□ -1.4
SF3B3-211ENST00000568291 F2Z2F3 143 aa6.33□□□□□ -1.4
SF3B3-211ENST00000568291 INAFM2P0DMQ5 153 aa6.33□□□□□ -1.4
SF3B3-211ENST00000568291 CACNG7P62955 275 aa6.33□□□□□ -1.4
SF3B3-211ENST00000568291 LINC01551Q86U37 167 aa6.33□□□□□ -1.4
SF3B3-211ENST00000568291 BIN3Q9NQY0 253 aa6.33□□□□□ -1.4
SF3B3-211ENST00000568291 A0A087WX48 190 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 TRBV6-8A0A0A6YYG3 113 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 LRCOL1A6NCL2 159 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 CTRLP40313 264 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 KRTAP10-1P60331 282 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 GAGE6Q13070 117 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 XP32Q5T750 250 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 Q5VSD8 79 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 Q8N976 141 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 BAALCQ8WXS3 180 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 UBE2WQ96B02 151 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 CHCHD5Q9BSY4 110 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 URGCP-MRPS24S4R325 110 aa6.32□□□□□ -1.4
SF3B3-211ENST00000568291 K7EP13 123 aa6.31□□□□□ -1.4
SF3B3-211ENST00000568291 GAS8-AS1O95177 125 aa6.31□□□□□ -1.4
SF3B3-211ENST00000568291 XGP55808 180 aa6.31□□□□□ -1.4
SF3B3-211ENST00000568291 HAMPP81172 84 aa6.31□□□□□ -1.4
SF3B3-211ENST00000568291 MPV17L2Q567V2 206 aa6.31□□□□□ -1.4
SF3B3-211ENST00000568291 CLPSL2Q6UWE3 100 aa6.31□□□□□ -1.4
SF3B3-211ENST00000568291 C15orf54Q8N8G6 183 aa6.31□□□□□ -1.4
SF3B3-211ENST00000568291 FRZBQ92765 325 aa6.31□□□□□ -1.4
SF3B3-211ENST00000568291 DPH3P1Q9H4G8 78 aa6.31□□□□□ -1.4
SF3B3-211ENST00000568291 VPS13BQ7Z7G8 4022 aa6.3□□□□□ -1.4
SF3B3-211ENST00000568291 IGKV2D-24A0A075B6R9 120 aa6.3□□□□□ -1.4
SF3B3-211ENST00000568291 TRGC1P0CF51 173 aa6.3□□□□□ -1.4
SF3B3-211ENST00000568291 TMEM241Q24JQ0 296 aa6.3□□□□□ -1.4
SF3B3-211ENST00000568291 RASL11AQ6T310 242 aa6.3□□□□□ -1.4
SF3B3-211ENST00000568291 ATRAIDQ6UW56 229 aa6.3□□□□□ -1.4
SF3B3-211ENST00000568291 FAM231DQ6ZW35 169 aa6.3□□□□□ -1.4
SF3B3-211ENST00000568291 GATD1Q8NB37 220 aa6.3□□□□□ -1.4
SF3B3-211ENST00000568291 RPL39LQ96EH5 51 aaKnown RBP6.3□□□□□ -1.4
SF3B3-211ENST00000568291 A8MWL6 223 aa6.29□□□□□ -1.4
SF3B3-211ENST00000568291 ANGP03950 147 aaKnown RBP6.29□□□□□ -1.4
SF3B3-211ENST00000568291 RPL23P62829 140 aaKnown RBP6.29□□□□□ -1.4
SF3B3-211ENST00000568291 ADIRFQ15847 76 aa6.29□□□□□ -1.4
SF3B3-211ENST00000568291 LINC01620Q4KN68 170 aa6.29□□□□□ -1.4
SF3B3-211ENST00000568291 WDR73Q6P4I2 378 aa6.29□□□□□ -1.4
SF3B3-211ENST00000568291 ENHOQ6UWT2 76 aa6.29□□□□□ -1.4
SF3B3-211ENST00000568291 NIT2Q9NQR4 276 aa6.29□□□□□ -1.4
SF3B3-211ENST00000568291 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-211ENST00000568291 TRAV8-3A0A0A6YYJ7 113 aa6.28□□□□□ -1.4
SF3B3-211ENST00000568291 HIGD1CA8MV81 97 aa6.28□□□□□ -1.4
SF3B3-211ENST00000568291 H7C1H1 209 aa6.28□□□□□ -1.4
SF3B3-211ENST00000568291 RBX1P62877 108 aa6.28□□□□□ -1.4
SF3B3-211ENST00000568291 LAGE3Q14657 143 aa6.28□□□□□ -1.4
SF3B3-211ENST00000568291 PEA15Q15121 130 aa6.28□□□□□ -1.4
SF3B3-211ENST00000568291 KCNIP4Q6PIL6 250 aa6.28□□□□□ -1.4
SF3B3-211ENST00000568291 Q8N814 137 aa6.28□□□□□ -1.4
SF3B3-211ENST00000568291 ISOC2Q96AB3 205 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms