RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 A0A1B0GW15 77 aa12.39□□□□□ -0.43
COMMD4-222ENST00000568034 HBBP68871 147 aa12.39□□□□□ -0.43
COMMD4-222ENST00000568034 LYPD5Q6UWN5 251 aa12.39□□□□□ -0.43
COMMD4-222ENST00000568034 ATP5L2Q7Z4Y8 100 aa12.39□□□□□ -0.43
COMMD4-222ENST00000568034 AMN1Q8IY45 258 aa12.39□□□□□ -0.43
COMMD4-222ENST00000568034 RPS10P5Q9NQ39 176 aa12.39□□□□□ -0.43
COMMD4-222ENST00000568034 CAMPP49913 170 aa12.38□□□□□ -0.43
COMMD4-222ENST00000568034 UBE2D3P61077 147 aa12.38□□□□□ -0.43
COMMD4-222ENST00000568034 UBE2D2P62837 147 aa12.38□□□□□ -0.43
COMMD4-222ENST00000568034 ZNRF2Q8NHG8 242 aa12.38□□□□□ -0.43
COMMD4-222ENST00000568034 TRBV7-3A0A075B6L6 115 aa12.37□□□□□ -0.43
COMMD4-222ENST00000568034 GAS8-AS1O95177 125 aa12.37□□□□□ -0.43
COMMD4-222ENST00000568034 SNAPINO95295 136 aa12.37□□□□□ -0.43
COMMD4-222ENST00000568034 RAB4AP20338 218 aa12.37□□□□□ -0.43
COMMD4-222ENST00000568034 CCL18P55774 89 aa12.37□□□□□ -0.43
COMMD4-222ENST00000568034 TIRAPP58753 221 aa12.37□□□□□ -0.43
COMMD4-222ENST00000568034 RPL36AP83881 106 aaKnown RBP12.37□□□□□ -0.43
COMMD4-222ENST00000568034 SH2D6Q7Z4S9 175 aa12.37□□□□□ -0.43
COMMD4-222ENST00000568034 ATP6V0E2Q8NHE4 81 aa12.37□□□□□ -0.43
COMMD4-222ENST00000568034 RPL36ALQ969Q0 106 aaKnown RBP12.37□□□□□ -0.43
COMMD4-222ENST00000568034 BTF3L4Q96K17 158 aa12.37□□□□□ -0.43
COMMD4-222ENST00000568034 MRPS16Q9Y3D3 137 aaKnown RBP12.37□□□□□ -0.43
COMMD4-222ENST00000568034 DNAH2Q9P225 4427 aa12.37□□□□□ -0.43
COMMD4-222ENST00000568034 H7C1H1 209 aa12.36□□□□□ -0.43
COMMD4-222ENST00000568034 FAM104BQ5XKR9 115 aa12.36□□□□□ -0.43
COMMD4-222ENST00000568034 RASL11AQ6T310 242 aa12.36□□□□□ -0.43
COMMD4-222ENST00000568034 ATRAIDQ6UW56 229 aa12.36□□□□□ -0.43
COMMD4-222ENST00000568034 UBE2DNLQ8IWF7 75 aa12.36□□□□□ -0.43
COMMD4-222ENST00000568034 UPK3BQ9BT76 320 aa12.36□□□□□ -0.43
COMMD4-222ENST00000568034 TRAV9-1A0A075B6T8 112 aa12.34□□□□□ -0.43
COMMD4-222ENST00000568034 S100A8P05109 93 aa12.34□□□□□ -0.43
COMMD4-222ENST00000568034 KCNIP4Q6PIL6 250 aa12.34□□□□□ -0.43
COMMD4-222ENST00000568034 RPL39LQ96EH5 51 aaKnown RBP12.34□□□□□ -0.43
COMMD4-222ENST00000568034 DNAJC30Q96LL9 226 aa12.34□□□□□ -0.43
COMMD4-222ENST00000568034 GTSF1LQ9H1H1 148 aa12.34□□□□□ -0.43
COMMD4-222ENST00000568034 URGCP-MRPS24S4R325 110 aa12.34□□□□□ -0.43
COMMD4-222ENST00000568034 MRPL51Q4U2R6 128 aaKnown RBP12.33□□□□□ -0.44
COMMD4-222ENST00000568034 FRZBQ92765 325 aa12.33□□□□□ -0.44
COMMD4-222ENST00000568034 NIT2Q9NQR4 276 aa12.33□□□□□ -0.44
COMMD4-222ENST00000568034 SMKR1H3BMG3 65 aa12.32□□□□□ -0.44
COMMD4-222ENST00000568034 RPS10P46783 165 aaKnown RBP12.32□□□□□ -0.44
COMMD4-222ENST00000568034 MRAP2Q96G30 205 aa12.32□□□□□ -0.44
COMMD4-222ENST00000568034 DNAH10Q8IVF4 4471 aa12.31□□□□□ -0.44
COMMD4-222ENST00000568034 IGHV3-38A0A0C4DH36 116 aa12.31□□□□□ -0.44
COMMD4-222ENST00000568034 NCR2O95944 276 aa12.31□□□□□ -0.44
COMMD4-222ENST00000568034 S100PP25815 95 aa12.31□□□□□ -0.44
COMMD4-222ENST00000568034 LELP1Q5T871 98 aa12.31□□□□□ -0.44
COMMD4-222ENST00000568034 TNFRSF18Q9Y5U5 241 aa12.31□□□□□ -0.44
COMMD4-222ENST00000568034 TRBV6-5A0A0K0K1A5 114 aa12.3□□□□□ -0.44
COMMD4-222ENST00000568034 TMEM136Q6ZRR5 245 aa12.3□□□□□ -0.44
COMMD4-222ENST00000568034 NRACQ8N912 160 aa12.3□□□□□ -0.44
COMMD4-222ENST00000568034 DAZ4Q86SG3 579 aaKnown RBP12.29□□□□□ -0.44
COMMD4-222ENST00000568034 WFDC10BQ8IUB3 73 aa12.29□□□□□ -0.44
COMMD4-222ENST00000568034 YPEL4Q96NS1 127 aa12.29□□□□□ -0.44
COMMD4-222ENST00000568034 DAZ3Q9NR90 486 aaKnown RBP12.29□□□□□ -0.44
COMMD4-222ENST00000568034 IGLV2-18A0A075B6J9 118 aa12.28□□□□□ -0.44
COMMD4-222ENST00000568034 ELOBQ15370 118 aa12.28□□□□□ -0.44
COMMD4-222ENST00000568034 OR10J3Q5JRS4 329 aa12.28□□□□□ -0.44
COMMD4-222ENST00000568034 NTM-AS1Q6ZSK4 140 aa12.28□□□□□ -0.44
COMMD4-222ENST00000568034 Q9H8V8 135 aa12.28□□□□□ -0.44
COMMD4-222ENST00000568034 TGIF2-C20orf24A0A0A6YYL0 155 aa12.27□□□□□ -0.45
COMMD4-222ENST00000568034 DNAH17Q9UFH2 4485 aa12.26□□□□□ -0.45
COMMD4-222ENST00000568034 SDHAF1A6NFY7 115 aa12.26□□□□□ -0.45
COMMD4-222ENST00000568034 D6R8Y8 96 aa12.26□□□□□ -0.45
COMMD4-222ENST00000568034 TRBV6-8A0A0A6YYG3 113 aa12.25□□□□□ -0.45
COMMD4-222ENST00000568034 SIVA1O15304 175 aa12.25□□□□□ -0.45
COMMD4-222ENST00000568034 CKS2P33552 79 aa12.25□□□□□ -0.45
COMMD4-222ENST00000568034 POLR2KP53803 58 aaKnown RBP12.25□□□□□ -0.45
COMMD4-222ENST00000568034 Q6ZR54 194 aa12.25□□□□□ -0.45
COMMD4-222ENST00000568034 CBLN2Q8IUK8 224 aa12.25□□□□□ -0.45
COMMD4-222ENST00000568034 TMEM70Q9BUB7 260 aa12.25□□□□□ -0.45
COMMD4-222ENST00000568034 KRTAP1-5Q9BYS1 174 aa12.25□□□□□ -0.45
COMMD4-222ENST00000568034 TRBV24-1A0A075B6N3 115 aa12.24□□□□□ -0.45
COMMD4-222ENST00000568034 DNAH10OSP0CZ25 163 aa12.24□□□□□ -0.45
COMMD4-222ENST00000568034 DEFB104AQ8WTQ1 72 aa12.24□□□□□ -0.45
COMMD4-222ENST00000568034 ST20Q9HBF5 79 aa12.24□□□□□ -0.45
COMMD4-222ENST00000568034 TRAV8-6A0A0B4J262 113 aa12.23□□□□□ -0.45
COMMD4-222ENST00000568034 NBDYA0A0U1RRE5 68 aa12.23□□□□□ -0.45
COMMD4-222ENST00000568034 NPYP01303 97 aa12.23□□□□□ -0.45
COMMD4-222ENST00000568034 PPBPP02775 128 aa12.23□□□□□ -0.45
COMMD4-222ENST00000568034 GNB1LQ9BYB4 327 aa12.23□□□□□ -0.45
COMMD4-222ENST00000568034 TNFRSF6BO95407 300 aa12.22□□□□□ -0.45
COMMD4-222ENST00000568034 PPP1R17O96001 155 aa12.22□□□□□ -0.45
COMMD4-222ENST00000568034 HLA-DQA1P01909 254 aa12.22□□□□□ -0.45
COMMD4-222ENST00000568034 SUMO2P61956 95 aaKnown RBP12.22□□□□□ -0.45
COMMD4-222ENST00000568034 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
COMMD4-222ENST00000568034 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
COMMD4-222ENST00000568034 LINC01556Q5JQF7 62 aa12.22□□□□□ -0.45
COMMD4-222ENST00000568034 ORMDL3Q8N138 153 aa12.22□□□□□ -0.45
COMMD4-222ENST00000568034 Q8N3U1 123 aa12.22□□□□□ -0.45
COMMD4-222ENST00000568034 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.22□□□□□ -0.45
COMMD4-222ENST00000568034 SMCO4Q9NRQ5 59 aa12.22□□□□□ -0.45
COMMD4-222ENST00000568034 FAT2Q9NYQ8 4349 aa12.21□□□□□ -0.45
COMMD4-222ENST00000568034 TRBV27A0A0K0K1C4 114 aa12.21□□□□□ -0.45
COMMD4-222ENST00000568034 M0R2N4 97 aa12.21□□□□□ -0.45
COMMD4-222ENST00000568034 PHOX2AO14813 284 aa12.21□□□□□ -0.45
COMMD4-222ENST00000568034 COX19Q49B96 90 aa12.21□□□□□ -0.45
COMMD4-222ENST00000568034 PRELID3AQ96N28 172 aa12.21□□□□□ -0.45
COMMD4-222ENST00000568034 I3L3M4 83 aa12.2□□□□□ -0.46
COMMD4-222ENST00000568034 TSHBP01222 138 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms