RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 BCL2P10415 239 aa6.78□□□□□ -1.32
GTF3C1-206ENST00000566779 KCNIP4Q6PIL6 250 aa6.78□□□□□ -1.32
GTF3C1-206ENST00000566779 SLC51BQ86UW2 128 aa6.78□□□□□ -1.32
GTF3C1-206ENST00000566779 C11orf52Q96A22 123 aa6.78□□□□□ -1.32
GTF3C1-206ENST00000566779 A0A087WWC5 75 aa6.77□□□□□ -1.33
GTF3C1-206ENST00000566779 A0A087WX48 190 aa6.77□□□□□ -1.33
GTF3C1-206ENST00000566779 CEBPGP53567 150 aa6.77□□□□□ -1.33
GTF3C1-206ENST00000566779 ALKAL2Q6UX46 152 aa6.77□□□□□ -1.33
GTF3C1-206ENST00000566779 Q6ZNX1 250 aa6.77□□□□□ -1.33
GTF3C1-206ENST00000566779 AP1S3Q96PC3 154 aa6.77□□□□□ -1.33
GTF3C1-206ENST00000566779 MLST8Q9BVC4 326 aa6.77□□□□□ -1.33
GTF3C1-206ENST00000566779 KLK12Q9UKR0 248 aa6.77□□□□□ -1.33
GTF3C1-206ENST00000566779 IGKV2D-24A0A075B6R9 120 aa6.76□□□□□ -1.33
GTF3C1-206ENST00000566779 TRAV1-1A0A0B4J248 108 aa6.76□□□□□ -1.33
GTF3C1-206ENST00000566779 TMEM262E9PQX1 116 aa6.76□□□□□ -1.33
GTF3C1-206ENST00000566779 PDE6DO43924 150 aa6.76□□□□□ -1.33
GTF3C1-206ENST00000566779 P01737 135 aa6.76□□□□□ -1.33
GTF3C1-206ENST00000566779 KRTAP10-1P60331 282 aa6.76□□□□□ -1.33
GTF3C1-206ENST00000566779 C9orf62Q8N4C0 152 aa6.76□□□□□ -1.33
GTF3C1-206ENST00000566779 FER1L6-AS1Q8NA97 138 aa6.76□□□□□ -1.33
GTF3C1-206ENST00000566779 UBE2WQ96B02 151 aa6.76□□□□□ -1.33
GTF3C1-206ENST00000566779 ABCA13Q86UQ4 5058 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 TRBV7-3A0A075B6L6 115 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 TRBV10-1A0A0K0K1A3 114 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 SNAI2O43623 268 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 CXCL1P09341 107 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 OR5AL1P0C617 328 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 NKX2-5P52952 324 aaPredicted RBP6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 RPS20P60866 119 aaKnown RBP6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 RAB4BP61018 213 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 UBE2D3P61077 147 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 UBE2D2P62837 147 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 WFDC2Q14508 124 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 LAGE3Q14657 143 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 NEXN-AS1Q8NBZ9 246 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 DNAJC30Q96LL9 226 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 CHCHD5Q9BSY4 110 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 TM2D2Q9BX73 214 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 VAX2Q9UIW0 290 aa6.75□□□□□ -1.33
GTF3C1-206ENST00000566779 TRBV20OR9-2A0A075B6H5 130 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 TRAV8-3A0A0A6YYJ7 113 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 LRCOL1A6NCL2 159 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 IGLV2-8P01709 118 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 CRPP02741 224 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 CLPSL2Q6UWE3 100 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 NIT1Q86X76 327 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 Q8N1X5 172 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 Q8N814 137 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 C15orf54Q8N8G6 183 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 DEFB104AQ8WTQ1 72 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 BAALCQ8WXS3 180 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 RMI2Q96E14 147 aa6.74□□□□□ -1.33
GTF3C1-206ENST00000566779 XKRY2A2RUG3 117 aa6.73□□□□□ -1.33
GTF3C1-206ENST00000566779 BIN3Q9NQY0 253 aa6.73□□□□□ -1.33
GTF3C1-206ENST00000566779 LRP1BQ9NZR2 4599 aa6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 C19orf71A6NCJ1 209 aa6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 EPM2AB3EWF7 344 aa6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 TRIAP1O43715 76 aa6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 HLA-DQA1P01909 254 aa6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 SMR3BP02814 79 aaPredicted RBP6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 ANGP03950 147 aaKnown RBP6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 CACNG7P62955 275 aa6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 MPV17L2Q567V2 206 aa6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 SUMO4Q6EEV6 95 aa6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 LYZL1Q6UWQ5 148 aa6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 RNASE7Q9H1E1 156 aaKnown RBP6.72□□□□□ -1.33
GTF3C1-206ENST00000566779 TRBV6-8A0A0A6YYG3 113 aa6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 TRGC1P0CF51 173 aa6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 IGLC6P0CF74 106 aa6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 BLOC1S1P78537 153 aa6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 GAGE6Q13070 117 aa6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 ELOBQ15370 118 aa6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 LINC01620Q4KN68 170 aa6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 Q8N976 141 aa6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 OR10G8Q8NGN5 311 aa6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 NTN5Q8WTR8 489 aaPredicted RBP6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 RPP21Q9H633 154 aaKnown RBP6.71□□□□□ -1.34
GTF3C1-206ENST00000566779 DNAH5Q8TE73 4624 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 TRBV25-1A0A075B6N4 114 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 A0A1B0GVG6 124 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 H7C1H1 209 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 K7EN84 100 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 TAGLN2P37802 199 aaKnown RBP6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 TWIST1Q15672 202 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 Q5VSD8 79 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 FRZBQ92765 325 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 SMIM12Q96EX1 92 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 EIF5A2Q9GZV4 153 aaKnown RBP6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 KIF25-AS1Q9Y6Z4 181 aa6.7□□□□□ -1.34
GTF3C1-206ENST00000566779 NTF3P20783 257 aa6.69□□□□□ -1.34
GTF3C1-206ENST00000566779 XGP55808 180 aa6.69□□□□□ -1.34
GTF3C1-206ENST00000566779 OCC1Q8TAD7 63 aa6.69□□□□□ -1.34
GTF3C1-206ENST00000566779 CHCHD7Q9BUK0 85 aa6.69□□□□□ -1.34
GTF3C1-206ENST00000566779 DPH3P1Q9H4G8 78 aa6.69□□□□□ -1.34
GTF3C1-206ENST00000566779 COX11Q9Y6N1 276 aa6.69□□□□□ -1.34
GTF3C1-206ENST00000566779 HSPG2P98160 4391 aa6.69□□□□□ -1.34
GTF3C1-206ENST00000566779 APOBP04114 4563 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms