RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 C9orf85Q96MD7 179 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
TSR3-202ENST00000566296 CARHSP1Q9Y2V2 147 aaKnown RBP11.05□□□□□ -0.64
TSR3-202ENST00000566296 RS1O15537 224 aa11.04□□□□□ -0.64
TSR3-202ENST00000566296 LAGE3Q14657 143 aa11.04□□□□□ -0.64
TSR3-202ENST00000566296 TM2D2Q9BX73 214 aa11.04□□□□□ -0.64
TSR3-202ENST00000566296 A8MWL6 223 aa11.03□□□□□ -0.64
TSR3-202ENST00000566296 H3BVH4 76 aa11.03□□□□□ -0.64
TSR3-202ENST00000566296 ARMS2P0C7Q2 107 aa11.03□□□□□ -0.64
TSR3-202ENST00000566296 CFAP126Q5VTH2 177 aa11.03□□□□□ -0.64
TSR3-202ENST00000566296 GTSF1LQ9H1H1 148 aa11.03□□□□□ -0.64
TSR3-202ENST00000566296 IGHV3-73A0A0B4J1V6 119 aa11.02□□□□□ -0.65
TSR3-202ENST00000566296 J3QL48 77 aa11.02□□□□□ -0.65
TSR3-202ENST00000566296 PPP1R2P9O14990 202 aa11.02□□□□□ -0.65
TSR3-202ENST00000566296 OR5AL1P0C617 328 aa11.02□□□□□ -0.65
TSR3-202ENST00000566296 ATP6V0E2Q8NHE4 81 aa11.02□□□□□ -0.65
TSR3-202ENST00000566296 V9GYV3 84 aa11.02□□□□□ -0.65
TSR3-202ENST00000566296 FAM231BA6NCW3 169 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 SNAI2O43623 268 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 MT-ND4LP03901 98 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 IGLC6P0CF74 106 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 GZMBP10144 247 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 FER1L6-AS1Q8NA97 138 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 PTH2Q96A98 100 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 ANAPC16Q96DE5 110 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 SSBP4Q9BWG4 385 aaPredicted RBP11.01□□□□□ -0.65
TSR3-202ENST00000566296 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 PHLDA3Q9Y5J5 127 aa11.01□□□□□ -0.65
TSR3-202ENST00000566296 F2Z2F3 143 aa11□□□□□ -0.65
TSR3-202ENST00000566296 PIK3CD-AS1Q5SR53 167 aa11□□□□□ -0.65
TSR3-202ENST00000566296 SYT8Q8NBV8 401 aa11□□□□□ -0.65
TSR3-202ENST00000566296 APOC3P02656 99 aa10.99□□□□□ -0.65
TSR3-202ENST00000566296 PLA2G1BP04054 148 aaKnown RBP10.99□□□□□ -0.65
TSR3-202ENST00000566296 ZFP82Q8N141 532 aa10.99□□□□□ -0.65
TSR3-202ENST00000566296 TPPP3Q9BW30 176 aa10.99□□□□□ -0.65
TSR3-202ENST00000566296 FAM30AQ9NZY2 134 aa10.99□□□□□ -0.65
TSR3-202ENST00000566296 SRRM2Q9UQ35 2752 aaKnown RBP10.99□□□□□ -0.65
TSR3-202ENST00000566296 TRAV8-3A0A0A6YYJ7 113 aa10.98□□□□□ -0.65
TSR3-202ENST00000566296 CTRLP40313 264 aa10.98□□□□□ -0.65
TSR3-202ENST00000566296 FOXA3P55318 350 aaPredicted RBP10.98□□□□□ -0.65
TSR3-202ENST00000566296 CACNG7P62955 275 aa10.98□□□□□ -0.65
TSR3-202ENST00000566296 SVBPQ8N300 66 aa10.98□□□□□ -0.65
TSR3-202ENST00000566296 GTSF1Q8WW33 167 aa10.98□□□□□ -0.65
TSR3-202ENST00000566296 RHEBQ15382 184 aa10.97□□□□□ -0.65
TSR3-202ENST00000566296 WDR73Q6P4I2 378 aa10.97□□□□□ -0.65
TSR3-202ENST00000566296 CLRN3Q8NCR9 226 aa10.97□□□□□ -0.65
TSR3-202ENST00000566296 OR10AG1Q8NH19 301 aa10.97□□□□□ -0.65
TSR3-202ENST00000566296 CTDSP1Q9GZU7 261 aa10.97□□□□□ -0.65
TSR3-202ENST00000566296 NAT8BQ9UHF3 227 aa10.97□□□□□ -0.65
TSR3-202ENST00000566296 SMIM27A0A1W2PRY6 76 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 GAGE12JA6NER3 117 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 HIGD1CA8MV81 97 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 A8MWV9 139 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 M0R381 172 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 SNAPINO95295 136 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 GAGE1Q13065 139 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 GAGE4Q13068 117 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 GAGE5Q13069 117 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 WFDC2Q14508 124 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 GAGE13Q4V321 117 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 SPANXN1Q5VSR9 72 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 LYZL1Q6UWQ5 148 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 BORCS7Q96B45 105 aa10.96□□□□□ -0.65
TSR3-202ENST00000566296 LECT2O14960 151 aa10.95□□□□□ -0.66
TSR3-202ENST00000566296 DMRTA1Q5VZB9 504 aa10.95□□□□□ -0.66
TSR3-202ENST00000566296 ZFP2Q6ZN57 461 aa10.95□□□□□ -0.66
TSR3-202ENST00000566296 LINC00528Q8N1L1 170 aa10.95□□□□□ -0.66
TSR3-202ENST00000566296 Q8N3U1 123 aa10.95□□□□□ -0.66
TSR3-202ENST00000566296 CNFNQ9BYD5 112 aa10.95□□□□□ -0.66
TSR3-202ENST00000566296 TMEM242Q9NWH2 141 aa10.95□□□□□ -0.66
TSR3-202ENST00000566296 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.94□□□□□ -0.66
TSR3-202ENST00000566296 A0A087WWC5 75 aa10.94□□□□□ -0.66
TSR3-202ENST00000566296 C7orf77A4D0Y5 90 aa10.94□□□□□ -0.66
TSR3-202ENST00000566296 LINC00694P0DN24 101 aa10.94□□□□□ -0.66
TSR3-202ENST00000566296 Q6ZSA8 131 aa10.94□□□□□ -0.66
TSR3-202ENST00000566296 RMI2Q96E14 147 aa10.94□□□□□ -0.66
TSR3-202ENST00000566296 PGLYRP4Q96LB8 373 aa10.94□□□□□ -0.66
TSR3-202ENST00000566296 COX11Q9Y6N1 276 aa10.94□□□□□ -0.66
TSR3-202ENST00000566296 MUC21A0A0G2JKD1 596 aa10.93□□□□□ -0.66
TSR3-202ENST00000566296 MUC21A0A140T8X8 626 aa10.93□□□□□ -0.66
TSR3-202ENST00000566296 DAZ4Q86SG3 579 aaKnown RBP10.93□□□□□ -0.66
TSR3-202ENST00000566296 NUP35Q8NFH5 326 aa10.93□□□□□ -0.66
TSR3-202ENST00000566296 IMMP2LQ96T52 175 aa10.93□□□□□ -0.66
TSR3-202ENST00000566296 RPS10P5Q9NQ39 176 aa10.93□□□□□ -0.66
TSR3-202ENST00000566296 DAZ3Q9NR90 486 aaKnown RBP10.93□□□□□ -0.66
TSR3-202ENST00000566296 URGCP-MRPS24S4R325 110 aa10.93□□□□□ -0.66
TSR3-202ENST00000566296 A0A1B0GUT8 65 aa10.92□□□□□ -0.66
TSR3-202ENST00000566296 AP1S3Q96PC3 154 aa10.92□□□□□ -0.66
TSR3-202ENST00000566296 RHODO00212 210 aa10.91□□□□□ -0.66
TSR3-202ENST00000566296 TRGC1P0CF51 173 aa10.91□□□□□ -0.66
TSR3-202ENST00000566296 NTF3P20783 257 aa10.91□□□□□ -0.66
TSR3-202ENST00000566296 SSTP61278 116 aa10.91□□□□□ -0.66
TSR3-202ENST00000566296 TWIST1Q15672 202 aa10.91□□□□□ -0.66
TSR3-202ENST00000566296 KCNIP4Q6PIL6 250 aa10.91□□□□□ -0.66
TSR3-202ENST00000566296 DEFB104AQ8WTQ1 72 aa10.91□□□□□ -0.66
TSR3-202ENST00000566296 RIGQ13278 110 aa10.9□□□□□ -0.66
TSR3-202ENST00000566296 BAALCQ8WXS3 180 aa10.9□□□□□ -0.66
TSR3-202ENST00000566296 A0A1B0GW15 77 aa10.89□□□□□ -0.67
TSR3-202ENST00000566296 KRTAP29-1A8MX34 341 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms