RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 UBE2D2P62837 147 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 OR10J3Q5JRS4 329 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 C1orf134Q5TEV5 83 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 RASL11AQ6T310 242 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 LINC00336Q6ZUF6 198 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 DAZ4Q86SG3 579 aaKnown RBP8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 COMMD7Q86VX2 200 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 C10orf126Q8N4M7 172 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 NUP35Q8NFH5 326 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 SEC11CQ9BY50 192 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 TMEM191AQ9H0A3 160 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 NIT2Q9NQR4 276 aa8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 DAZ3Q9NR90 486 aaKnown RBP8.63□□□□□ -1.03
SHCBP1-204ENST00000565887 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
SHCBP1-204ENST00000565887 SACSQ9NZJ4 4579 aa8.62□□□□□ -1.03
SHCBP1-204ENST00000565887 IGHV3-38A0A0C4DH36 116 aa8.62□□□□□ -1.03
SHCBP1-204ENST00000565887 NEXN-AS1Q8NBZ9 246 aa8.62□□□□□ -1.03
SHCBP1-204ENST00000565887 RYR2Q92736 4967 aa8.61□□□□□ -1.03
SHCBP1-204ENST00000565887 PPP1R17O96001 155 aa8.61□□□□□ -1.03
SHCBP1-204ENST00000565887 DNAH10OSP0CZ25 163 aa8.61□□□□□ -1.03
SHCBP1-204ENST00000565887 PKIAP61925 76 aa8.61□□□□□ -1.03
SHCBP1-204ENST00000565887 SUMO4Q6EEV6 95 aa8.61□□□□□ -1.03
SHCBP1-204ENST00000565887 KCNIP4Q6PIL6 250 aa8.61□□□□□ -1.03
SHCBP1-204ENST00000565887 Q9UF83 564 aa8.61□□□□□ -1.03
SHCBP1-204ENST00000565887 KMT2AQ03164 3969 aa8.6□□□□□ -1.03
SHCBP1-204ENST00000565887 LINC01556Q5JQF7 62 aa8.6□□□□□ -1.03
SHCBP1-204ENST00000565887 CTDSP1Q9GZU7 261 aa8.6□□□□□ -1.03
SHCBP1-204ENST00000565887 ATP5L2Q7Z4Y8 100 aa8.59□□□□□ -1.03
SHCBP1-204ENST00000565887 NFE4Q86UQ8 179 aa8.59□□□□□ -1.03
SHCBP1-204ENST00000565887 C6orf223Q8N319 242 aa8.59□□□□□ -1.03
SHCBP1-204ENST00000565887 MRAP2Q96G30 205 aa8.59□□□□□ -1.03
SHCBP1-204ENST00000565887 IMMP2LQ96T52 175 aa8.59□□□□□ -1.03
SHCBP1-204ENST00000565887 CHCHD7Q9BUK0 85 aa8.59□□□□□ -1.03
SHCBP1-204ENST00000565887 URGCP-MRPS24S4R325 110 aa8.59□□□□□ -1.03
SHCBP1-204ENST00000565887 HYDINQ4G0P3 5121 aa8.58□□□□□ -1.04
SHCBP1-204ENST00000565887 TRBV6-8A0A0A6YYG3 113 aa8.58□□□□□ -1.04
SHCBP1-204ENST00000565887 WFDC10BQ8IUB3 73 aa8.58□□□□□ -1.04
SHCBP1-204ENST00000565887 GATD1Q8NB37 220 aa8.58□□□□□ -1.04
SHCBP1-204ENST00000565887 RYR3Q15413 4870 aa8.58□□□□□ -1.04
SHCBP1-204ENST00000565887 DNAH6Q9C0G6 4158 aa8.57□□□□□ -1.04
SHCBP1-204ENST00000565887 RAB4AP20338 218 aa8.57□□□□□ -1.04
SHCBP1-204ENST00000565887 HBBP68871 147 aa8.57□□□□□ -1.04
SHCBP1-204ENST00000565887 ELOBQ15370 118 aa8.57□□□□□ -1.04
SHCBP1-204ENST00000565887 C10orf91Q5T1B1 145 aa8.57□□□□□ -1.04
SHCBP1-204ENST00000565887 TMEM242Q9NWH2 141 aa8.57□□□□□ -1.04
SHCBP1-204ENST00000565887 TRBV25-1A0A075B6N4 114 aa8.56□□□□□ -1.04
SHCBP1-204ENST00000565887 NDUFA5Q16718 116 aa8.56□□□□□ -1.04
SHCBP1-204ENST00000565887 FAM104BQ5XKR9 115 aa8.56□□□□□ -1.04
SHCBP1-204ENST00000565887 BTF3L4Q96K17 158 aa8.56□□□□□ -1.04
SHCBP1-204ENST00000565887 CARHSP1Q9Y2V2 147 aaKnown RBP8.56□□□□□ -1.04
SHCBP1-204ENST00000565887 A0A087WX48 190 aa8.55□□□□□ -1.04
SHCBP1-204ENST00000565887 TRBV6-5A0A0K0K1A5 114 aa8.55□□□□□ -1.04
SHCBP1-204ENST00000565887 IBA57-AS1B1ANH7 110 aa8.55□□□□□ -1.04
SHCBP1-204ENST00000565887 NCR2O95944 276 aa8.55□□□□□ -1.04
SHCBP1-204ENST00000565887 ADCYAP1P18509 176 aa8.55□□□□□ -1.04
SHCBP1-204ENST00000565887 CAMPP49913 170 aa8.55□□□□□ -1.04
SHCBP1-204ENST00000565887 LAGE3Q14657 143 aa8.55□□□□□ -1.04
SHCBP1-204ENST00000565887 TRAV9-1A0A075B6T8 112 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 IGHV1-24A0A0C4DH33 117 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 A0A1B0GXF2 115 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 TMEM262E9PQX1 116 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 RTL8CO15255 209 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 PPBPP02775 128 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 COTL1Q14019 142 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 RHEBQ15382 184 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 IQCJQ1A5X6 159 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 NIT1Q86X76 327 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 ST20Q9HBF5 79 aa8.54□□□□□ -1.04
SHCBP1-204ENST00000565887 TRAV8-3A0A0A6YYJ7 113 aa8.53□□□□□ -1.04
SHCBP1-204ENST00000565887 TRAV26-2A0A0B4J265 109 aa8.53□□□□□ -1.04
SHCBP1-204ENST00000565887 PRSS29PA6NIE9 313 aa8.53□□□□□ -1.04
SHCBP1-204ENST00000565887 I3L3M4 83 aa8.53□□□□□ -1.04
SHCBP1-204ENST00000565887 S100PP25815 95 aa8.53□□□□□ -1.04
SHCBP1-204ENST00000565887 MRPL54Q6P161 138 aaKnown RBP8.53□□□□□ -1.04
SHCBP1-204ENST00000565887 CHCHD5Q9BSY4 110 aa8.53□□□□□ -1.04
SHCBP1-204ENST00000565887 SDHAF1A6NFY7 115 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 IGHV3-30P01768 117 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 IGHV3-33P01772 117 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 IGHV3-30-3P0DP02 117 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 IGHV3-30-5P0DP03 117 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 PMCHP20382 165 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 NTM-AS1Q6ZSK4 140 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 CLRN3Q8NCR9 226 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 TM2D2Q9BX73 214 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 KRTAP1-5Q9BYS1 174 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 COX11Q9Y6N1 276 aa8.52□□□□□ -1.05
SHCBP1-204ENST00000565887 TRBV24-1A0A075B6N3 115 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 C7orf77A4D0Y5 90 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 H7C423 109 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 VCYO14598 125 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 PHOX2AO14813 284 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 TCAPO15273 167 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 SNAPINO95295 136 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 CKS2P33552 79 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 Q0VG73 95 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 MRPL51Q4U2R6 128 aaKnown RBP8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 SVBPQ8N300 66 aa8.51□□□□□ -1.05
SHCBP1-204ENST00000565887 RPL39LQ96EH5 51 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms