RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 GZMBP10144 247 aa15.48■□□□□ 0.07
RAB40C-209ENST00000565511 SPANXN1Q5VSR9 72 aa15.48■□□□□ 0.07
RAB40C-209ENST00000565511 C11orf52Q96A22 123 aa15.48■□□□□ 0.07
RAB40C-209ENST00000565511 LRP1Q07954 4544 aaKnown RBP15.47■□□□□ 0.07
RAB40C-209ENST00000565511 GNG13Q9P2W3 67 aa15.47■□□□□ 0.07
RAB40C-209ENST00000565511 KRTAP10-4P60372 401 aaPredicted RBP15.46■□□□□ 0.07
RAB40C-209ENST00000565511 ELOBQ15370 118 aa15.46■□□□□ 0.07
RAB40C-209ENST00000565511 CENPWQ5EE01 88 aa15.45■□□□□ 0.06
RAB40C-209ENST00000565511 KCNIP4Q6PIL6 250 aa15.45■□□□□ 0.06
RAB40C-209ENST00000565511 PKHD1L1Q86WI1 4243 aa15.44■□□□□ 0.06
RAB40C-209ENST00000565511 F5H697 171 aa15.44■□□□□ 0.06
RAB40C-209ENST00000565511 IGLC6P0CF74 106 aa15.44■□□□□ 0.06
RAB40C-209ENST00000565511 Q0VG73 95 aa15.44■□□□□ 0.06
RAB40C-209ENST00000565511 CHCHD5Q9BSY4 110 aa15.44■□□□□ 0.06
RAB40C-209ENST00000565511 C1orf43Q9BWL3 253 aa15.44■□□□□ 0.06
RAB40C-209ENST00000565511 VAX2Q9UIW0 290 aa15.44■□□□□ 0.06
RAB40C-209ENST00000565511 RAB19A4D1S5 217 aa15.43■□□□□ 0.06
RAB40C-209ENST00000565511 ANGP03950 147 aaKnown RBP15.43■□□□□ 0.06
RAB40C-209ENST00000565511 PLA2G1BP04054 148 aaKnown RBP15.43■□□□□ 0.06
RAB40C-209ENST00000565511 CHAC1Q9BUX1 264 aa15.43■□□□□ 0.06
RAB40C-209ENST00000565511 MANBALQ9NQG1 85 aa15.43■□□□□ 0.06
RAB40C-209ENST00000565511 FAT3Q8TDW7 4589 aa15.43■□□□□ 0.06
RAB40C-209ENST00000565511 CLPSL2Q6UWE3 100 aa15.42■□□□□ 0.06
RAB40C-209ENST00000565511 CIRBP-AS1Q8TBR5 109 aa15.42■□□□□ 0.06
RAB40C-209ENST00000565511 AP1S3Q96PC3 154 aa15.42■□□□□ 0.06
RAB40C-209ENST00000565511 TRAV1-1A0A0B4J248 108 aa15.41■□□□□ 0.06
RAB40C-209ENST00000565511 C19orf71A6NCJ1 209 aa15.41■□□□□ 0.06
RAB40C-209ENST00000565511 CRPP02741 224 aa15.41■□□□□ 0.06
RAB40C-209ENST00000565511 EIF5AP63241 154 aaKnown RBP15.41■□□□□ 0.06
RAB40C-209ENST00000565511 GAGE6Q13070 117 aa15.41■□□□□ 0.06
RAB40C-209ENST00000565511 KRTAP26-1Q6PEX3 210 aa15.41■□□□□ 0.06
RAB40C-209ENST00000565511 TPPP3Q9BW30 176 aa15.41■□□□□ 0.06
RAB40C-209ENST00000565511 TRBV20OR9-2A0A075B6H5 130 aa15.4■□□□□ 0.06
RAB40C-209ENST00000565511 USP17L23D6RBM5 183 aa15.4■□□□□ 0.06
RAB40C-209ENST00000565511 RBX1P62877 108 aa15.4■□□□□ 0.06
RAB40C-209ENST00000565511 M0QY20 66 aa15.39■□□□□ 0.05
RAB40C-209ENST00000565511 HLA-DQA1P01909 254 aa15.39■□□□□ 0.05
RAB40C-209ENST00000565511 MGPP08493 103 aa15.39■□□□□ 0.05
RAB40C-209ENST00000565511 SUMO4Q6EEV6 95 aa15.39■□□□□ 0.05
RAB40C-209ENST00000565511 FER1L6-AS1Q8NA97 138 aa15.39■□□□□ 0.05
RAB40C-209ENST00000565511 OR2D3Q8NGH3 330 aa15.39■□□□□ 0.05
RAB40C-209ENST00000565511 PRR34Q9NV39 138 aa15.38■□□□□ 0.05
RAB40C-209ENST00000565511 J3QL48 77 aa15.37■□□□□ 0.05
RAB40C-209ENST00000565511 PRSS1P07477 247 aa15.37■□□□□ 0.05
RAB40C-209ENST00000565511 SMIM17P0DL12 118 aa15.37■□□□□ 0.05
RAB40C-209ENST00000565511 SULT1A2P50226 295 aa15.36■□□□□ 0.05
RAB40C-209ENST00000565511 LINC00269Q8N2A0 174 aa15.36■□□□□ 0.05
RAB40C-209ENST00000565511 MIAQ16674 131 aa15.35■□□□□ 0.05
RAB40C-209ENST00000565511 IQCJQ1A5X6 159 aa15.35■□□□□ 0.05
RAB40C-209ENST00000565511 DEFB104AQ8WTQ1 72 aa15.35■□□□□ 0.05
RAB40C-209ENST00000565511 TRBV25-1A0A075B6N4 114 aa15.34■□□□□ 0.05
RAB40C-209ENST00000565511 KRTAP29-1A8MX34 341 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-209ENST00000565511 GNG4P50150 75 aa15.34■□□□□ 0.05
RAB40C-209ENST00000565511 MEF2BQ02080 365 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-209ENST00000565511 C14orf177Q52M58 125 aa15.34■□□□□ 0.05
RAB40C-209ENST00000565511 GFRA4Q9GZZ7 299 aa15.34■□□□□ 0.05
RAB40C-209ENST00000565511 RAB5CP51148 216 aa15.33■□□□□ 0.04
RAB40C-209ENST00000565511 NKX2-5P52952 324 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-209ENST00000565511 TMEM97Q5BJF2 176 aa15.33■□□□□ 0.04
RAB40C-209ENST00000565511 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.33■□□□□ 0.04
RAB40C-209ENST00000565511 RPS20P60866 119 aaKnown RBP15.32■□□□□ 0.04
RAB40C-209ENST00000565511 PKIAP61925 76 aa15.32■□□□□ 0.04
RAB40C-209ENST00000565511 LYZL1Q6UWQ5 148 aa15.32■□□□□ 0.04
RAB40C-209ENST00000565511 C20orf203Q8NBC4 194 aa15.32■□□□□ 0.04
RAB40C-209ENST00000565511 DAZAP1Q96EP5 407 aaKnown RBP15.32■□□□□ 0.04
RAB40C-209ENST00000565511 IGHV1-24A0A0C4DH33 117 aa15.31■□□□□ 0.04
RAB40C-209ENST00000565511 PANO1I0J062 215 aa15.31■□□□□ 0.04
RAB40C-209ENST00000565511 BCL2P10415 239 aa15.31■□□□□ 0.04
RAB40C-209ENST00000565511 CACNG7P62955 275 aa15.31■□□□□ 0.04
RAB40C-209ENST00000565511 IGLV4-60A0A075B6I1 120 aa15.3■□□□□ 0.04
RAB40C-209ENST00000565511 IGLV10-54A0A075B6I4 117 aa15.3■□□□□ 0.04
RAB40C-209ENST00000565511 P01737 135 aa15.3■□□□□ 0.04
RAB40C-209ENST00000565511 SMIM12Q96EX1 92 aa15.3■□□□□ 0.04
RAB40C-209ENST00000565511 MED9Q9NWA0 146 aa15.3■□□□□ 0.04
RAB40C-209ENST00000565511 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.29■□□□□ 0.04
RAB40C-209ENST00000565511 PDE6DO43924 150 aa15.28■□□□□ 0.04
RAB40C-209ENST00000565511 RASL11AQ6T310 242 aa15.28■□□□□ 0.04
RAB40C-209ENST00000565511 NUDT10Q8NFP7 164 aa15.28■□□□□ 0.04
RAB40C-209ENST00000565511 NUDT11Q96G61 164 aa15.28■□□□□ 0.04
RAB40C-209ENST00000565511 H7C1H1 209 aa15.27■□□□□ 0.04
RAB40C-209ENST00000565511 K7EN84 100 aa15.27■□□□□ 0.04
RAB40C-209ENST00000565511 IFNA1P01562 189 aa15.27■□□□□ 0.04
RAB40C-209ENST00000565511 NTF3P20783 257 aa15.27■□□□□ 0.04
RAB40C-209ENST00000565511 CTRLP40313 264 aa15.27■□□□□ 0.04
RAB40C-209ENST00000565511 REG3AQ06141 175 aa15.27■□□□□ 0.04
RAB40C-209ENST00000565511 TCTE3Q8IZS6 198 aa15.27■□□□□ 0.04
RAB40C-209ENST00000565511 C9orf163Q8N9P6 203 aa15.27■□□□□ 0.04
RAB40C-209ENST00000565511 HNRNPA3P51991 378 aaKnown RBP15.26■□□□□ 0.03
RAB40C-209ENST00000565511 EIF5AL1Q6IS14 154 aaKnown RBP15.26■□□□□ 0.03
RAB40C-209ENST00000565511 TMEM243Q9BU79 118 aa15.26■□□□□ 0.03
RAB40C-209ENST00000565511 DPH3P1Q9H4G8 78 aa15.26■□□□□ 0.03
RAB40C-209ENST00000565511 F2Z2F3 143 aa15.25■□□□□ 0.03
RAB40C-209ENST00000565511 TEX46H3BTG2 121 aa15.25■□□□□ 0.03
RAB40C-209ENST00000565511 RNASE7Q9H1E1 156 aaKnown RBP15.25■□□□□ 0.03
RAB40C-209ENST00000565511 HMCN2Q8NDA2 5059 aa15.24■□□□□ 0.03
RAB40C-209ENST00000565511 TRGC1P0CF51 173 aa15.24■□□□□ 0.03
RAB40C-209ENST00000565511 C9orf62Q8N4C0 152 aa15.24■□□□□ 0.03
RAB40C-209ENST00000565511 NIT2Q9NQR4 276 aa15.24■□□□□ 0.03
RAB40C-209ENST00000565511 TRAV26-2A0A0B4J265 109 aa15.23■□□□□ 0.03
RAB40C-209ENST00000565511 XKRY2A2RUG3 117 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms