RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 HCP5Q6MZN7 132 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 GFRALQ6UXV0 394 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 Q6YL49 198 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 Q6ZVQ6 151 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 AMN1Q8IY45 258 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 Q8N6K4 173 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 PHLDA1Q8WV24 401 aaPredicted RBP3.83□□□□□ -1.8
CAPN3-214ENST00000565274 RNF185Q96GF1 192 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 UPK3BQ9BT76 320 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 DYNLRB1Q9NP97 96 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 ESM1Q9NQ30 184 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 DPM3Q9P2X0 92 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 TIMM8BQ9Y5J9 83 aaPredicted RBP3.83□□□□□ -1.8
CAPN3-214ENST00000565274 SELENOKQ9Y6D0 94 aa3.83□□□□□ -1.8
CAPN3-214ENST00000565274 SVILO95425 2214 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 IGLV11-55A0A075B6I3 123 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 ZNF73O43830 326 aaPredicted RBP3.82□□□□□ -1.8
CAPN3-214ENST00000565274 SH2D1AO60880 128 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 NDUFS7O75251 213 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 IGKCP01834 107 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 SMIM13P0DJ93 91 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 CXCL5P42830 114 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 CRIP1P50238 77 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 NPC2P61916 151 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 SNRPD3P62318 126 aaKnown RBP3.82□□□□□ -1.8
CAPN3-214ENST00000565274 SRSF9Q13242 221 aaKnown RBP eCLIP3.82□□□□□ -1.8
CAPN3-214ENST00000565274 NSUN5P1Q3KNT7 163 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 MRPL51Q4U2R6 128 aaKnown RBP3.82□□□□□ -1.8
CAPN3-214ENST00000565274 MINOS1Q5TGZ0 78 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 CEND1Q8N111 149 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 C11orf72Q8NBR9 251 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 ODF3Q96PU9 254 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 CHAC1Q9BUX1 264 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 CNFNQ9BYD5 112 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 MINOS1-NBL1R4GNA1 71 aa3.82□□□□□ -1.8
CAPN3-214ENST00000565274 CEP250Q9BV73 2442 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 ICE1Q9Y2F5 2266 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 MALRD1Q5VYJ5 2156 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 TRAV8-3A0A0A6YYJ7 113 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 LOC389332A0A1B0GUA5 103 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 hADV29S1A0JD25 119 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 A8MUN3 132 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 LST1O00453 97 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 NPYP01303 97 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 FXYD2P54710 66 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 KRTAP10-11P60412 298 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 LYZL1Q6UWQ5 148 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 CLEC19AQ6UXS0 136 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 MAPKAPK5-AS1Q8N8E1 139 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 C15orf53Q8NAA6 179 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 COPS9Q8WXC6 57 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 MAP6D1Q9H9H5 199 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 NXT2Q9NPJ8 142 aaKnown RBP3.81□□□□□ -1.8
CAPN3-214ENST00000565274 MAP1BP46821 2468 aaKnown RBP3.81□□□□□ -1.8
CAPN3-214ENST00000565274 NAV3Q8IVL0 2385 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 POLEQ07864 2286 aa3.81□□□□□ -1.8
CAPN3-214ENST00000565274 ZNF292O60281 2723 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 RP1L1Q8IWN7 2480 aaPredicted RBP3.8□□□□□ -1.8
CAPN3-214ENST00000565274 IGHV3-21A0A0B4J1V1 117 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 IGHV3-72A0A0B4J1Y9 119 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 TRBV27A0A0K0K1C4 114 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 M0R381 172 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 EGR2P11161 476 aaPredicted RBP3.8□□□□□ -1.8
CAPN3-214ENST00000565274 FCER1GP30273 86 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 CKS2P33552 79 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 ZNF80P51504 273 aaPredicted RBP3.8□□□□□ -1.8
CAPN3-214ENST00000565274 PRR3P79522 188 aaKnown RBP3.8□□□□□ -1.8
CAPN3-214ENST00000565274 TWIST1Q15672 202 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 ORMDL2Q53FV1 153 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 C11orf71Q6IPW1 123 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 LCA10Q71F78 164 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 Q8N2B8 174 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 LINC01600Q96MT4 127 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 CYSTM1Q9H1C7 97 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 DKK2Q9UBU2 259 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 ARFGEF3Q5TH69 2177 aa3.8□□□□□ -1.8
CAPN3-214ENST00000565274 PRRC2CQ9Y520 2896 aaKnown RBP3.79□□□□□ -1.8
CAPN3-214ENST00000565274 TRBV25-1A0A075B6N4 114 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 IGKV2D-26A0A0A0MRZ7 120 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 IGLL5B9A064 214 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 K7ERJ3 54 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 CTSGP08311 255 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 INAFM2P0DMQ5 153 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 IGHV4-31P0DP07 118 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 LINC00313P59037 77 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 HIST1H4AP62805 103 aaKnown RBP3.79□□□□□ -1.8
CAPN3-214ENST00000565274 MRPS36P82909 103 aaKnown RBP3.79□□□□□ -1.8
CAPN3-214ENST00000565274 PHF5AQ7RTV0 110 aaKnown RBP3.79□□□□□ -1.8
CAPN3-214ENST00000565274 NHP2Q9NX24 153 aaKnown RBP3.79□□□□□ -1.8
CAPN3-214ENST00000565274 LINC00527Q9UJ94 153 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 LINC00588Q9Y4M8 146 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 ROS1P08922 2347 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 DMXL1Q9Y485 3027 aa3.79□□□□□ -1.8
CAPN3-214ENST00000565274 IGLV2-18A0A075B6J9 118 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 TRBV7-3A0A075B6L6 115 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 IGHV4-4A0A075B6R2 117 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 TMSB15BA0A087X1C1 80 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 IGHV3OR16-9A0A0B4J2B5 98 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 RBMY1BA6NDE4 496 aaKnown RBP3.78□□□□□ -1.8
CAPN3-214ENST00000565274 RBMY1EA6NEQ0 496 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms