RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 NEXN-AS1Q8NBZ9 246 aa9.04□□□□□ -0.96
CLK3-216ENST00000564468 DPH3P1Q9H4G8 78 aa9.04□□□□□ -0.96
CLK3-216ENST00000564468 TNFRSF18Q9Y5U5 241 aa9.04□□□□□ -0.96
CLK3-216ENST00000564468 PSCAO43653 123 aa9.03□□□□□ -0.96
CLK3-216ENST00000564468 MGPP08493 103 aa9.03□□□□□ -0.96
CLK3-216ENST00000564468 SRP19P09132 144 aaKnown RBP9.03□□□□□ -0.96
CLK3-216ENST00000564468 CTRLP40313 264 aa9.03□□□□□ -0.96
CLK3-216ENST00000564468 FAM74A3Q4VXF1 159 aa9.03□□□□□ -0.96
CLK3-216ENST00000564468 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
CLK3-216ENST00000564468 DAZ4Q86SG3 579 aaKnown RBP9.03□□□□□ -0.96
CLK3-216ENST00000564468 DNAJC30Q96LL9 226 aa9.03□□□□□ -0.96
CLK3-216ENST00000564468 CHCHD7Q9BUK0 85 aa9.03□□□□□ -0.96
CLK3-216ENST00000564468 CNFNQ9BYD5 112 aa9.03□□□□□ -0.96
CLK3-216ENST00000564468 DAZ3Q9NR90 486 aaKnown RBP9.03□□□□□ -0.96
CLK3-216ENST00000564468 DNAH11Q96DT5 4516 aa9.03□□□□□ -0.96
CLK3-216ENST00000564468 TRAV8-3A0A0A6YYJ7 113 aa9.02□□□□□ -0.97
CLK3-216ENST00000564468 PKIAP61925 76 aa9.02□□□□□ -0.97
CLK3-216ENST00000564468 PEA15Q15121 130 aa9.02□□□□□ -0.97
CLK3-216ENST00000564468 ELOBQ15370 118 aa9.02□□□□□ -0.97
CLK3-216ENST00000564468 TWIST1Q15672 202 aa9.02□□□□□ -0.97
CLK3-216ENST00000564468 CT83Q5H943 113 aa9.02□□□□□ -0.97
CLK3-216ENST00000564468 SMIM15Q7Z3B0 74 aa9.02□□□□□ -0.97
CLK3-216ENST00000564468 TM2D2Q9BX73 214 aa9.02□□□□□ -0.97
CLK3-216ENST00000564468 SMDT1Q9H4I9 107 aa9.02□□□□□ -0.97
CLK3-216ENST00000564468 A0A087WX48 190 aa9.01□□□□□ -0.97
CLK3-216ENST00000564468 TRBV6-8A0A0A6YYG3 113 aa9.01□□□□□ -0.97
CLK3-216ENST00000564468 LINC01551Q86U37 167 aa9.01□□□□□ -0.97
CLK3-216ENST00000564468 NIT1Q86X76 327 aa9.01□□□□□ -0.97
CLK3-216ENST00000564468 BORCS7Q96B45 105 aa9.01□□□□□ -0.97
CLK3-216ENST00000564468 KRTAP4-5Q9BYR2 181 aa9.01□□□□□ -0.97
CLK3-216ENST00000564468 Q9HAA7 133 aa9.01□□□□□ -0.97
CLK3-216ENST00000564468 PGPEP1Q9NXJ5 209 aa9.01□□□□□ -0.97
CLK3-216ENST00000564468 M0QY20 66 aa9□□□□□ -0.97
CLK3-216ENST00000564468 TMEM241Q24JQ0 296 aa9□□□□□ -0.97
CLK3-216ENST00000564468 RASL11AQ6T310 242 aa9□□□□□ -0.97
CLK3-216ENST00000564468 C15orf54Q8N8G6 183 aa9□□□□□ -0.97
CLK3-216ENST00000564468 OSTCQ9NRP0 149 aa9□□□□□ -0.97
CLK3-216ENST00000564468 COX11Q9Y6N1 276 aa9□□□□□ -0.97
CLK3-216ENST00000564468 DYNC1H1Q14204 4646 aaKnown RBP9□□□□□ -0.97
CLK3-216ENST00000564468 A0A087WTM6 91 aa8.99□□□□□ -0.97
CLK3-216ENST00000564468 FAM231BA6NCW3 169 aa8.99□□□□□ -0.97
CLK3-216ENST00000564468 FOXA3P55318 350 aaPredicted RBP8.99□□□□□ -0.97
CLK3-216ENST00000564468 SUMO4Q6EEV6 95 aa8.99□□□□□ -0.97
CLK3-216ENST00000564468 CDPF1Q6NVV7 123 aa8.99□□□□□ -0.97
CLK3-216ENST00000564468 FRZBQ92765 325 aa8.99□□□□□ -0.97
CLK3-216ENST00000564468 RMI2Q96E14 147 aa8.99□□□□□ -0.97
CLK3-216ENST00000564468 GFRA4Q9GZZ7 299 aa8.99□□□□□ -0.97
CLK3-216ENST00000564468 TMEM262E9PQX1 116 aa8.98□□□□□ -0.97
CLK3-216ENST00000564468 CDK2AP2O75956 126 aa8.98□□□□□ -0.97
CLK3-216ENST00000564468 GTSF1Q8WW33 167 aa8.98□□□□□ -0.97
CLK3-216ENST00000564468 NIT2Q9NQR4 276 aa8.98□□□□□ -0.97
CLK3-216ENST00000564468 TRBV25-1A0A075B6N4 114 aa8.97□□□□□ -0.97
CLK3-216ENST00000564468 KRTAP10-2P60368 255 aa8.97□□□□□ -0.97
CLK3-216ENST00000564468 MAPKAPK5-AS1Q8N8E1 139 aa8.97□□□□□ -0.97
CLK3-216ENST00000564468 TSKUQ8WUA8 353 aa8.97□□□□□ -0.97
CLK3-216ENST00000564468 PGLYRP4Q96LB8 373 aa8.97□□□□□ -0.97
CLK3-216ENST00000564468 CHCHD5Q9BSY4 110 aa8.97□□□□□ -0.97
CLK3-216ENST00000564468 NAT8Q9UHE5 227 aa8.97□□□□□ -0.97
CLK3-216ENST00000564468 RAB14P61106 215 aa8.96□□□□□ -0.98
CLK3-216ENST00000564468 Q0VG73 95 aa8.96□□□□□ -0.98
CLK3-216ENST00000564468 Q8N3U1 123 aa8.96□□□□□ -0.98
CLK3-216ENST00000564468 KLK12Q9UKR0 248 aa8.96□□□□□ -0.98
CLK3-216ENST00000564468 HSPG2P98160 4391 aa8.96□□□□□ -0.98
CLK3-216ENST00000564468 IGHV1-24A0A0C4DH33 117 aa8.95□□□□□ -0.98
CLK3-216ENST00000564468 A0A1B0GUT8 65 aa8.95□□□□□ -0.98
CLK3-216ENST00000564468 HIGD1CA8MV81 97 aa8.95□□□□□ -0.98
CLK3-216ENST00000564468 RPL23P62829 140 aaKnown RBP8.95□□□□□ -0.98
CLK3-216ENST00000564468 ADIRFQ15847 76 aa8.95□□□□□ -0.98
CLK3-216ENST00000564468 ISOC2Q96AB3 205 aa8.95□□□□□ -0.98
CLK3-216ENST00000564468 CRPP02741 224 aa8.94□□□□□ -0.98
CLK3-216ENST00000564468 IQCJQ1A5X6 159 aa8.94□□□□□ -0.98
CLK3-216ENST00000564468 NTM-AS1Q6ZSK4 140 aa8.94□□□□□ -0.98
CLK3-216ENST00000564468 NTN5Q8WTR8 489 aaPredicted RBP8.94□□□□□ -0.98
CLK3-216ENST00000564468 UBE2WQ96B02 151 aa8.94□□□□□ -0.98
CLK3-216ENST00000564468 LRCOL1A6NCL2 159 aa8.93□□□□□ -0.98
CLK3-216ENST00000564468 C9JQL5 133 aa8.93□□□□□ -0.98
CLK3-216ENST00000564468 SRSF3P84103 164 aaKnown RBP8.93□□□□□ -0.98
CLK3-216ENST00000564468 RIGQ13278 110 aa8.93□□□□□ -0.98
CLK3-216ENST00000564468 GATD1Q8NB37 220 aa8.93□□□□□ -0.98
CLK3-216ENST00000564468 V9GYV3 84 aa8.93□□□□□ -0.98
CLK3-216ENST00000564468 IGKV2D-24A0A075B6R9 120 aa8.92□□□□□ -0.98
CLK3-216ENST00000564468 ANGP03950 147 aaKnown RBP8.92□□□□□ -0.98
CLK3-216ENST00000564468 COTL1Q14019 142 aa8.92□□□□□ -0.98
CLK3-216ENST00000564468 MPV17L2Q567V2 206 aa8.92□□□□□ -0.98
CLK3-216ENST00000564468 ATRAIDQ6UW56 229 aa8.92□□□□□ -0.98
CLK3-216ENST00000564468 TMEM243Q9BU79 118 aa8.92□□□□□ -0.98
CLK3-216ENST00000564468 TMEM191AQ9H0A3 160 aa8.92□□□□□ -0.98
CLK3-216ENST00000564468 NAT8BQ9UHF3 227 aa8.92□□□□□ -0.98
CLK3-216ENST00000564468 GAGE6Q13070 117 aa8.91□□□□□ -0.98
CLK3-216ENST00000564468 Q8N1X5 172 aa8.91□□□□□ -0.98
CLK3-216ENST00000564468 Q8N814 137 aa8.91□□□□□ -0.98
CLK3-216ENST00000564468 TRAV26-2A0A0B4J265 109 aa8.9□□□□□ -0.98
CLK3-216ENST00000564468 UBE2L6O14933 153 aa8.9□□□□□ -0.98
CLK3-216ENST00000564468 NCR2O95944 276 aa8.9□□□□□ -0.98
CLK3-216ENST00000564468 RBX1P62877 108 aa8.9□□□□□ -0.98
CLK3-216ENST00000564468 MIAQ16674 131 aa8.9□□□□□ -0.98
CLK3-216ENST00000564468 NUP35Q8NFH5 326 aa8.9□□□□□ -0.98
CLK3-216ENST00000564468 C1orf43Q9BWL3 253 aa8.9□□□□□ -0.98
CLK3-216ENST00000564468 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
CLK3-216ENST00000564468 A0A1B0GUV1 79 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms