RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 UBE2D2P62837 147 aa11.46□□□□□ -0.57
RNF40-206ENST00000564260 GAGE1Q13065 139 aa11.46□□□□□ -0.57
RNF40-206ENST00000564260 GAGE4Q13068 117 aa11.46□□□□□ -0.57
RNF40-206ENST00000564260 GAGE5Q13069 117 aa11.46□□□□□ -0.57
RNF40-206ENST00000564260 GAGE13Q4V321 117 aa11.46□□□□□ -0.57
RNF40-206ENST00000564260 DAZ4Q86SG3 579 aaKnown RBP11.46□□□□□ -0.57
RNF40-206ENST00000564260 DAZ3Q9NR90 486 aaKnown RBP11.46□□□□□ -0.57
RNF40-206ENST00000564260 HYDINQ4G0P3 5121 aa11.46□□□□□ -0.58
RNF40-206ENST00000564260 TRAV9-2A0A087WT02 112 aa11.45□□□□□ -0.58
RNF40-206ENST00000564260 NBDYA0A0U1RRE5 68 aa11.45□□□□□ -0.58
RNF40-206ENST00000564260 MGPP08493 103 aa11.45□□□□□ -0.58
RNF40-206ENST00000564260 C10orf91Q5T1B1 145 aa11.45□□□□□ -0.58
RNF40-206ENST00000564260 RASL11AQ6T310 242 aa11.45□□□□□ -0.58
RNF40-206ENST00000564260 ATP5L2Q7Z4Y8 100 aa11.45□□□□□ -0.58
RNF40-206ENST00000564260 NEXN-AS1Q8NBZ9 246 aa11.45□□□□□ -0.58
RNF40-206ENST00000564260 IMMP2LQ96T52 175 aa11.45□□□□□ -0.58
RNF40-206ENST00000564260 DNAH10OSP0CZ25 163 aa11.44□□□□□ -0.58
RNF40-206ENST00000564260 ADCYAP1P18509 176 aa11.44□□□□□ -0.58
RNF40-206ENST00000564260 SUMO4Q6EEV6 95 aa11.44□□□□□ -0.58
RNF40-206ENST00000564260 CTDSP1Q9GZU7 261 aa11.44□□□□□ -0.58
RNF40-206ENST00000564260 NIT2Q9NQR4 276 aa11.44□□□□□ -0.58
RNF40-206ENST00000564260 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
RNF40-206ENST00000564260 PKIAP61925 76 aa11.43□□□□□ -0.58
RNF40-206ENST00000564260 C10orf126Q8N4M7 172 aa11.43□□□□□ -0.58
RNF40-206ENST00000564260 CARHSP1Q9Y2V2 147 aaKnown RBP11.43□□□□□ -0.58
RNF40-206ENST00000564260 PPP1R17O96001 155 aa11.42□□□□□ -0.58
RNF40-206ENST00000564260 LINC01556Q5JQF7 62 aa11.42□□□□□ -0.58
RNF40-206ENST00000564260 MRAP2Q96G30 205 aa11.42□□□□□ -0.58
RNF40-206ENST00000564260 CHCHD7Q9BUK0 85 aa11.42□□□□□ -0.58
RNF40-206ENST00000564260 TMEM242Q9NWH2 141 aa11.42□□□□□ -0.58
RNF40-206ENST00000564260 IGHV3-38A0A0C4DH36 116 aa11.41□□□□□ -0.58
RNF40-206ENST00000564260 HBBP68871 147 aa11.41□□□□□ -0.58
RNF40-206ENST00000564260 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
RNF40-206ENST00000564260 Q9UF83 564 aa11.41□□□□□ -0.58
RNF40-206ENST00000564260 IGLV2-18A0A075B6J9 118 aa11.4□□□□□ -0.58
RNF40-206ENST00000564260 TRAV9-1A0A075B6T8 112 aa11.4□□□□□ -0.58
RNF40-206ENST00000564260 KCNIP4Q6PIL6 250 aa11.4□□□□□ -0.58
RNF40-206ENST00000564260 LINC00336Q6ZUF6 198 aa11.4□□□□□ -0.58
RNF40-206ENST00000564260 GATD1Q8NB37 220 aa11.4□□□□□ -0.58
RNF40-206ENST00000564260 A0A1B0GXF2 115 aa11.39□□□□□ -0.59
RNF40-206ENST00000564260 RHEBQ15382 184 aa11.39□□□□□ -0.59
RNF40-206ENST00000564260 NDUFA5Q16718 116 aa11.39□□□□□ -0.59
RNF40-206ENST00000564260 TRBV6-8A0A0A6YYG3 113 aa11.38□□□□□ -0.59
RNF40-206ENST00000564260 TRBV6-5A0A0K0K1A5 114 aa11.38□□□□□ -0.59
RNF40-206ENST00000564260 C1orf134Q5TEV5 83 aa11.38□□□□□ -0.59
RNF40-206ENST00000564260 WFDC10BQ8IUB3 73 aa11.38□□□□□ -0.59
RNF40-206ENST00000564260 BTF3L4Q96K17 158 aa11.38□□□□□ -0.59
RNF40-206ENST00000564260 RAB4AP20338 218 aa11.37□□□□□ -0.59
RNF40-206ENST00000564260 FAM104BQ5XKR9 115 aa11.37□□□□□ -0.59
RNF40-206ENST00000564260 NFE4Q86UQ8 179 aa11.37□□□□□ -0.59
RNF40-206ENST00000564260 C6orf223Q8N319 242 aa11.37□□□□□ -0.59
RNF40-206ENST00000564260 M0R2N4 97 aa11.36□□□□□ -0.59
RNF40-206ENST00000564260 NCR2O95944 276 aa11.36□□□□□ -0.59
RNF40-206ENST00000564260 LAGE3Q14657 143 aa11.36□□□□□ -0.59
RNF40-206ENST00000564260 IQCJQ1A5X6 159 aa11.36□□□□□ -0.59
RNF40-206ENST00000564260 RNF185Q96GF1 192 aa11.36□□□□□ -0.59
RNF40-206ENST00000564260 TRBV25-1A0A075B6N4 114 aa11.35□□□□□ -0.59
RNF40-206ENST00000564260 PPBPP02775 128 aa11.35□□□□□ -0.59
RNF40-206ENST00000564260 ELOBQ15370 118 aa11.35□□□□□ -0.59
RNF40-206ENST00000564260 AMN1Q8IY45 258 aa11.35□□□□□ -0.59
RNF40-206ENST00000564260 SVBPQ8N300 66 aa11.35□□□□□ -0.59
RNF40-206ENST00000564260 URGCP-MRPS24S4R325 110 aa11.35□□□□□ -0.59
RNF40-206ENST00000564260 S100PP25815 95 aa11.34□□□□□ -0.59
RNF40-206ENST00000564260 CAMPP49913 170 aa11.34□□□□□ -0.59
RNF40-206ENST00000564260 TRAV26-2A0A0B4J265 109 aa11.33□□□□□ -0.6
RNF40-206ENST00000564260 IGHV1-24A0A0C4DH33 117 aa11.33□□□□□ -0.6
RNF40-206ENST00000564260 PHOX2AO14813 284 aa11.33□□□□□ -0.6
RNF40-206ENST00000564260 SNAPINO95295 136 aa11.33□□□□□ -0.6
RNF40-206ENST00000564260 COTL1Q14019 142 aa11.33□□□□□ -0.6
RNF40-206ENST00000564260 MRPL54Q6P161 138 aaKnown RBP11.33□□□□□ -0.6
RNF40-206ENST00000564260 NIT1Q86X76 327 aa11.33□□□□□ -0.6
RNF40-206ENST00000564260 CLRN3Q8NCR9 226 aa11.33□□□□□ -0.6
RNF40-206ENST00000564260 DNAH2Q9P225 4427 aa11.32□□□□□ -0.6
RNF40-206ENST00000564260 A0A087WX48 190 aa11.32□□□□□ -0.6
RNF40-206ENST00000564260 C7orf77A4D0Y5 90 aa11.32□□□□□ -0.6
RNF40-206ENST00000564260 SDHAF1A6NFY7 115 aa11.32□□□□□ -0.6
RNF40-206ENST00000564260 IBA57-AS1B1ANH7 110 aa11.32□□□□□ -0.6
RNF40-206ENST00000564260 COX19Q49B96 90 aa11.32□□□□□ -0.6
RNF40-206ENST00000564260 KRTAP1-5Q9BYS1 174 aa11.32□□□□□ -0.6
RNF40-206ENST00000564260 ST20Q9HBF5 79 aa11.32□□□□□ -0.6
RNF40-206ENST00000564260 TRBV24-1A0A075B6N3 115 aa11.31□□□□□ -0.6
RNF40-206ENST00000564260 I3L3M4 83 aa11.31□□□□□ -0.6
RNF40-206ENST00000564260 TCAPO15273 167 aa11.31□□□□□ -0.6
RNF40-206ENST00000564260 RPL32P62910 135 aaKnown RBP11.31□□□□□ -0.6
RNF40-206ENST00000564260 MRPL51Q4U2R6 128 aaKnown RBP11.31□□□□□ -0.6
RNF40-206ENST00000564260 C20orf78Q9BR46 151 aa11.31□□□□□ -0.6
RNF40-206ENST00000564260 LAMTOR2Q9Y2Q5 125 aa11.31□□□□□ -0.6
RNF40-206ENST00000564260 TRBV27A0A0K0K1C4 114 aa11.3□□□□□ -0.6
RNF40-206ENST00000564260 H7C423 109 aa11.3□□□□□ -0.6
RNF40-206ENST00000564260 RTL8CO15255 209 aa11.3□□□□□ -0.6
RNF40-206ENST00000564260 NTM-AS1Q6ZSK4 140 aa11.3□□□□□ -0.6
RNF40-206ENST00000564260 RPL39LQ96EH5 51 aaKnown RBP11.3□□□□□ -0.6
RNF40-206ENST00000564260 TRAV8-3A0A0A6YYJ7 113 aa11.29□□□□□ -0.6
RNF40-206ENST00000564260 APOC3P02656 99 aa11.29□□□□□ -0.6
RNF40-206ENST00000564260 CKS2P33552 79 aa11.29□□□□□ -0.6
RNF40-206ENST00000564260 POLR2KP53803 58 aaKnown RBP11.29□□□□□ -0.6
RNF40-206ENST00000564260 SUMO2P61956 95 aaKnown RBP11.29□□□□□ -0.6
RNF40-206ENST00000564260 CHCHD5Q9BSY4 110 aa11.29□□□□□ -0.6
RNF40-206ENST00000564260 TMEM243Q9BU79 118 aa11.29□□□□□ -0.6
RNF40-206ENST00000564260 TMEM70Q9BUB7 260 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms