RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 NTM-AS1Q6ZSK4 140 aa13.59□□□□□ -0.23
CHD9-208ENST00000563410 KIF25-AS1Q9Y6Z4 181 aa13.59□□□□□ -0.23
CHD9-208ENST00000563410 IGLV2-8P01709 118 aa13.58□□□□□ -0.24
CHD9-208ENST00000563410 ZNF345Q14585 488 aa13.58□□□□□ -0.24
CHD9-208ENST00000563410 SPANXN1Q5VSR9 72 aa13.58□□□□□ -0.24
CHD9-208ENST00000563410 CHCHD5Q9BSY4 110 aa13.58□□□□□ -0.24
CHD9-208ENST00000563410 VAX2Q9UIW0 290 aa13.58□□□□□ -0.24
CHD9-208ENST00000563410 UMAD1C9J7I0 102 aa13.57□□□□□ -0.24
CHD9-208ENST00000563410 USP17L23D6RBM5 183 aa13.57□□□□□ -0.24
CHD9-208ENST00000563410 F5H697 171 aa13.56□□□□□ -0.24
CHD9-208ENST00000563410 PFDN1O60925 122 aa13.56□□□□□ -0.24
CHD9-208ENST00000563410 SSTP61278 116 aa13.56□□□□□ -0.24
CHD9-208ENST00000563410 RGS21Q2M5E4 152 aa13.56□□□□□ -0.24
CHD9-208ENST00000563410 TMUB2Q71RG4 321 aa13.56□□□□□ -0.24
CHD9-208ENST00000563410 HLA-DQA1P01909 254 aa13.55□□□□□ -0.24
CHD9-208ENST00000563410 MIAQ16674 131 aa13.55□□□□□ -0.24
CHD9-208ENST00000563410 KRTAP26-1Q6PEX3 210 aa13.55□□□□□ -0.24
CHD9-208ENST00000563410 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.55□□□□□ -0.24
CHD9-208ENST00000563410 PRR34Q9NV39 138 aa13.55□□□□□ -0.24
CHD9-208ENST00000563410 PRSS1P07477 247 aa13.54□□□□□ -0.24
CHD9-208ENST00000563410 PKIAP61925 76 aa13.54□□□□□ -0.24
CHD9-208ENST00000563410 TMEM97Q5BJF2 176 aa13.54□□□□□ -0.24
CHD9-208ENST00000563410 HMCN2Q8NDA2 5059 aa13.54□□□□□ -0.24
CHD9-208ENST00000563410 H2AFB1P0C5Y9 115 aa13.53□□□□□ -0.24
CHD9-208ENST00000563410 RBX1P62877 108 aa13.53□□□□□ -0.24
CHD9-208ENST00000563410 DERL1Q9BUN8 251 aa13.53□□□□□ -0.24
CHD9-208ENST00000563410 HMSDA8MTL9 139 aa13.52□□□□□ -0.25
CHD9-208ENST00000563410 RPL35P42766 123 aaKnown RBP13.52□□□□□ -0.25
CHD9-208ENST00000563410 GAGE6Q13070 117 aa13.52□□□□□ -0.25
CHD9-208ENST00000563410 CLPSL2Q6UWE3 100 aa13.52□□□□□ -0.25
CHD9-208ENST00000563410 AP1S3Q96PC3 154 aa13.52□□□□□ -0.25
CHD9-208ENST00000563410 BCL2L11O43521 198 aa13.51□□□□□ -0.25
CHD9-208ENST00000563410 OXTP01178 125 aa13.51□□□□□ -0.25
CHD9-208ENST00000563410 SMIM17P0DL12 118 aa13.51□□□□□ -0.25
CHD9-208ENST00000563410 DGAT2L7PQ6IED9 249 aa13.51□□□□□ -0.25
CHD9-208ENST00000563410 LINC00269Q8N2A0 174 aa13.51□□□□□ -0.25
CHD9-208ENST00000563410 C9orf163Q8N9P6 203 aa13.51□□□□□ -0.25
CHD9-208ENST00000563410 TRBV25-1A0A075B6N4 114 aa13.5□□□□□ -0.25
CHD9-208ENST00000563410 A0A0D9SG52 128 aa13.5□□□□□ -0.25
CHD9-208ENST00000563410 GZMBP10144 247 aa13.5□□□□□ -0.25
CHD9-208ENST00000563410 CCL20P78556 96 aa13.5□□□□□ -0.25
CHD9-208ENST00000563410 KANTRA0A1W2PQU2 76 aa13.49□□□□□ -0.25
CHD9-208ENST00000563410 M0QY20 66 aa13.49□□□□□ -0.25
CHD9-208ENST00000563410 IGLC6P0CF74 106 aa13.49□□□□□ -0.25
CHD9-208ENST00000563410 IQCJQ1A5X6 159 aa13.49□□□□□ -0.25
CHD9-208ENST00000563410 C11orf52Q96A22 123 aa13.49□□□□□ -0.25
CHD9-208ENST00000563410 SERTAD4-AS1Q5TG53 156 aa13.48□□□□□ -0.25
CHD9-208ENST00000563410 PANO1I0J062 215 aa13.47□□□□□ -0.25
CHD9-208ENST00000563410 HNRNPA3P51991 378 aaKnown RBP13.47□□□□□ -0.25
CHD9-208ENST00000563410 RPL37AP61513 92 aaKnown RBP13.47□□□□□ -0.25
CHD9-208ENST00000563410 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.47□□□□□ -0.25
CHD9-208ENST00000563410 IGHV1-24A0A0C4DH33 117 aa13.46□□□□□ -0.25
CHD9-208ENST00000563410 C19orf71A6NCJ1 209 aa13.46□□□□□ -0.25
CHD9-208ENST00000563410 MGPP08493 103 aa13.46□□□□□ -0.25
CHD9-208ENST00000563410 CENPWQ5EE01 88 aa13.46□□□□□ -0.25
CHD9-208ENST00000563410 SUMO4Q6EEV6 95 aa13.46□□□□□ -0.25
CHD9-208ENST00000563410 FER1L6-AS1Q8NA97 138 aa13.46□□□□□ -0.25
CHD9-208ENST00000563410 TPPP3Q9BW30 176 aa13.46□□□□□ -0.25
CHD9-208ENST00000563410 MANBALQ9NQG1 85 aa13.46□□□□□ -0.25
CHD9-208ENST00000563410 GNG13Q9P2W3 67 aa13.46□□□□□ -0.25
CHD9-208ENST00000563410 REG3AQ06141 175 aa13.45□□□□□ -0.26
CHD9-208ENST00000563410 SDIM1Q6ZPB5 146 aa13.45□□□□□ -0.26
CHD9-208ENST00000563410 C20orf203Q8NBC4 194 aa13.45□□□□□ -0.26
CHD9-208ENST00000563410 OR2D3Q8NGH3 330 aa13.45□□□□□ -0.26
CHD9-208ENST00000563410 DAZAP1Q96EP5 407 aaKnown RBP13.45□□□□□ -0.26
CHD9-208ENST00000563410 IGLV10-54A0A075B6I4 117 aa13.44□□□□□ -0.26
CHD9-208ENST00000563410 TRAV1-1A0A0B4J248 108 aa13.44□□□□□ -0.26
CHD9-208ENST00000563410 EIF5AP63241 154 aaKnown RBP13.44□□□□□ -0.26
CHD9-208ENST00000563410 H7C1H1 209 aa13.43□□□□□ -0.26
CHD9-208ENST00000563410 RPS20P60866 119 aaKnown RBP13.43□□□□□ -0.26
CHD9-208ENST00000563410 CLRN3Q8NCR9 226 aa13.43□□□□□ -0.26
CHD9-208ENST00000563410 GFRA4Q9GZZ7 299 aa13.43□□□□□ -0.26
CHD9-208ENST00000563410 IGLV4-60A0A075B6I1 120 aa13.42□□□□□ -0.26
CHD9-208ENST00000563410 RAB19A4D1S5 217 aa13.42□□□□□ -0.26
CHD9-208ENST00000563410 NKX2-5P52952 324 aaPredicted RBP13.42□□□□□ -0.26
CHD9-208ENST00000563410 CACNG7P62955 275 aa13.42□□□□□ -0.26
CHD9-208ENST00000563410 A0A1B0GUV1 79 aa13.41□□□□□ -0.26
CHD9-208ENST00000563410 CNBPP62633 177 aaKnown RBP13.41□□□□□ -0.26
CHD9-208ENST00000563410 RASL11AQ6T310 242 aa13.41□□□□□ -0.26
CHD9-208ENST00000563410 UBR4Q5T4S7 5183 aa13.4□□□□□ -0.26
CHD9-208ENST00000563410 TRBV20OR9-2A0A075B6H5 130 aa13.4□□□□□ -0.26
CHD9-208ENST00000563410 CIRBPQ14011 172 aaKnown RBP13.4□□□□□ -0.26
CHD9-208ENST00000563410 SMIM12Q96EX1 92 aa13.4□□□□□ -0.26
CHD9-208ENST00000563410 TMEM243Q9BU79 118 aa13.4□□□□□ -0.26
CHD9-208ENST00000563410 TRAV8-4A0A0B4J246 113 aa13.39□□□□□ -0.27
CHD9-208ENST00000563410 F2Z2F3 143 aa13.39□□□□□ -0.27
CHD9-208ENST00000563410 P01737 135 aa13.39□□□□□ -0.27
CHD9-208ENST00000563410 GNG4P50150 75 aa13.39□□□□□ -0.27
CHD9-208ENST00000563410 LYZL1Q6UWQ5 148 aa13.39□□□□□ -0.27
CHD9-208ENST00000563410 PGLYRP4Q96LB8 373 aa13.39□□□□□ -0.27
CHD9-208ENST00000563410 SLPIP03973 132 aa13.38□□□□□ -0.27
CHD9-208ENST00000563410 RAB5CP51148 216 aa13.38□□□□□ -0.27
CHD9-208ENST00000563410 DPH3P1Q9H4G8 78 aa13.38□□□□□ -0.27
CHD9-208ENST00000563410 NIT2Q9NQR4 276 aa13.38□□□□□ -0.27
CHD9-208ENST00000563410 hDV102S1A0JD36 115 aa13.37□□□□□ -0.27
CHD9-208ENST00000563410 XKRY2A2RUG3 117 aa13.37□□□□□ -0.27
CHD9-208ENST00000563410 TRGC1P0CF51 173 aa13.37□□□□□ -0.27
CHD9-208ENST00000563410 NTF3P20783 257 aa13.37□□□□□ -0.27
CHD9-208ENST00000563410 MEF2BQ02080 365 aaPredicted RBP13.37□□□□□ -0.27
CHD9-208ENST00000563410 IFNA1P01562 189 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms