RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 ISOC2Q96AB3 205 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 AP1S3Q96PC3 154 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 TNFRSF18Q9Y5U5 241 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 V9GYV3 84 aa5.79□□□□□ -1.48
UBR1-204ENST00000563239 A8MWL6 223 aa5.78□□□□□ -1.48
UBR1-204ENST00000563239 M0QY20 66 aa5.78□□□□□ -1.48
UBR1-204ENST00000563239 ZNF56Q15929 161 aa5.78□□□□□ -1.48
UBR1-204ENST00000563239 Q8N3U1 123 aa5.78□□□□□ -1.48
UBR1-204ENST00000563239 NAT8Q9UHE5 227 aa5.78□□□□□ -1.48
UBR1-204ENST00000563239 TRBV7-3A0A075B6L6 115 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 IGHV3-38A0A0C4DH36 116 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 F5H697 171 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 SMIM17P0DL12 118 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 BTF3P20290 206 aaKnown RBP5.77□□□□□ -1.49
UBR1-204ENST00000563239 RAB14P61106 215 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 RPL36AP83881 106 aaKnown RBP5.77□□□□□ -1.49
UBR1-204ENST00000563239 TWIST1Q15672 202 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 LINC01556Q5JQF7 62 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 OR10J3Q5JRS4 329 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 SOHLH1Q5JUK2 328 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 SUMO4Q6EEV6 95 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 TSKUQ8WUA8 353 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 RPL36ALQ969Q0 106 aaKnown RBP5.77□□□□□ -1.49
UBR1-204ENST00000563239 PGLYRP4Q96LB8 373 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 GFRA4Q9GZZ7 299 aa5.77□□□□□ -1.49
UBR1-204ENST00000563239 TRAV8-6A0A0B4J262 113 aa5.76□□□□□ -1.49
UBR1-204ENST00000563239 FAM231BA6NCW3 169 aa5.76□□□□□ -1.49
UBR1-204ENST00000563239 HIGD1CA8MV81 97 aa5.76□□□□□ -1.49
UBR1-204ENST00000563239 MGPP08493 103 aa5.76□□□□□ -1.49
UBR1-204ENST00000563239 TRGC1P0CF51 173 aa5.76□□□□□ -1.49
UBR1-204ENST00000563239 ADIRFQ15847 76 aa5.76□□□□□ -1.49
UBR1-204ENST00000563239 NTM-AS1Q6ZSK4 140 aa5.76□□□□□ -1.49
UBR1-204ENST00000563239 DPH3P1Q9H4G8 78 aa5.76□□□□□ -1.49
UBR1-204ENST00000563239 DNAH5Q8TE73 4624 aa5.75□□□□□ -1.49
UBR1-204ENST00000563239 A0A087WWC5 75 aa5.75□□□□□ -1.49
UBR1-204ENST00000563239 K7EP13 123 aa5.75□□□□□ -1.49
UBR1-204ENST00000563239 C15orf54Q8N8G6 183 aa5.75□□□□□ -1.49
UBR1-204ENST00000563239 GATD1Q8NB37 220 aa5.75□□□□□ -1.49
UBR1-204ENST00000563239 NUP35Q8NFH5 326 aa5.75□□□□□ -1.49
UBR1-204ENST00000563239 TRAV9-2A0A087WT02 112 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 TRBV6-8A0A0A6YYG3 113 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 TRAV26-2A0A0B4J265 109 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 A0A1B0GUT8 65 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 SMIM27A0A1W2PRY6 76 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 IBA57-AS1B1ANH7 110 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 IGHV3-30P01768 117 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 IGHV3-33P01772 117 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 IGHV3-30-3P0DP02 117 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 IGHV3-30-5P0DP03 117 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 RASL11AQ6T310 242 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 NIT1Q86X76 327 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 DNAJC30Q96LL9 226 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 LRP1BQ9NZR2 4599 aa5.74□□□□□ -1.49
UBR1-204ENST00000563239 GAS8-AS1O95177 125 aa5.73□□□□□ -1.49
UBR1-204ENST00000563239 DAZ4Q86SG3 579 aaKnown RBP5.73□□□□□ -1.49
UBR1-204ENST00000563239 C10orf126Q8N4M7 172 aa5.73□□□□□ -1.49
UBR1-204ENST00000563239 RNF185Q96GF1 192 aa5.73□□□□□ -1.49
UBR1-204ENST00000563239 TMEM191AQ9H0A3 160 aa5.73□□□□□ -1.49
UBR1-204ENST00000563239 NIT2Q9NQR4 276 aa5.73□□□□□ -1.49
UBR1-204ENST00000563239 DAZ3Q9NR90 486 aaKnown RBP5.73□□□□□ -1.49
UBR1-204ENST00000563239 H7C1H1 209 aa5.72□□□□□ -1.49
UBR1-204ENST00000563239 ADCYAP1P18509 176 aa5.72□□□□□ -1.49
UBR1-204ENST00000563239 RPL39LQ96EH5 51 aaKnown RBP5.72□□□□□ -1.49
UBR1-204ENST00000563239 NAT8BQ9UHF3 227 aa5.72□□□□□ -1.49
UBR1-204ENST00000563239 KIAA1109Q2LD37 5005 aa5.72□□□□□ -1.49
UBR1-204ENST00000563239 TMEM218A2RU14 115 aa5.71□□□□□ -1.5
UBR1-204ENST00000563239 RAB4AP20338 218 aa5.71□□□□□ -1.5
UBR1-204ENST00000563239 KRTAP10-2P60368 255 aa5.71□□□□□ -1.5
UBR1-204ENST00000563239 RIGQ13278 110 aa5.71□□□□□ -1.5
UBR1-204ENST00000563239 IQCJQ1A5X6 159 aa5.71□□□□□ -1.5
UBR1-204ENST00000563239 UQCC3Q6UW78 93 aa5.71□□□□□ -1.5
UBR1-204ENST00000563239 NFE4Q86UQ8 179 aa5.71□□□□□ -1.5
UBR1-204ENST00000563239 DEFB104AQ8WTQ1 72 aa5.71□□□□□ -1.5
UBR1-204ENST00000563239 FRZBQ92765 325 aa5.71□□□□□ -1.5
UBR1-204ENST00000563239 TRBV6-5A0A0K0K1A5 114 aa5.7□□□□□ -1.5
UBR1-204ENST00000563239 A0A1B0GXF2 115 aa5.7□□□□□ -1.5
UBR1-204ENST00000563239 LINC00862A6NCI5 91 aa5.7□□□□□ -1.5
UBR1-204ENST00000563239 RPS10P46783 165 aaKnown RBP5.7□□□□□ -1.5
UBR1-204ENST00000563239 PNRC1Q12796 327 aaPredicted RBP5.7□□□□□ -1.5
UBR1-204ENST00000563239 LAGE3Q14657 143 aa5.7□□□□□ -1.5
UBR1-204ENST00000563239 MPV17L2Q567V2 206 aa5.7□□□□□ -1.5
UBR1-204ENST00000563239 TMEM97Q5BJF2 176 aa5.7□□□□□ -1.5
UBR1-204ENST00000563239 SMIM15Q7Z3B0 74 aa5.7□□□□□ -1.5
UBR1-204ENST00000563239 AMN1Q8IY45 258 aa5.7□□□□□ -1.5
UBR1-204ENST00000563239 BORCS7Q96B45 105 aa5.7□□□□□ -1.5
UBR1-204ENST00000563239 APOBP04114 4563 aaKnown RBP5.7□□□□□ -1.5
UBR1-204ENST00000563239 A0A087WTM6 91 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 LRCOL1A6NCL2 159 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 SMKR1H3BMG3 65 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 ATRAIDQ6UW56 229 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 COMMD7Q86VX2 200 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 MAPKAPK5-AS1Q8N8E1 139 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 Q8N976 141 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 CHCHD5Q9BSY4 110 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 CHCHD7Q9BUK0 85 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 Q9HAA7 133 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 KLK12Q9UKR0 248 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
UBR1-204ENST00000563239 TRBV25-1A0A075B6N4 114 aa5.68□□□□□ -1.5
UBR1-204ENST00000563239 A0A087WX48 190 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms