RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 IGHV3-43A0A0B4J1X8 118 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 C19orf71A6NCJ1 209 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 IBA57-AS1B1ANH7 110 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 SMIM1B2RUZ4 78 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 RHOHQ15669 191 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 FAM103A1Q9BTL3 118 aaKnown RBP3.32□□□□□ -1.88
SMG1-207ENST00000563235 R4GMQ9 66 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 EP300Q09472 2414 aaPredicted RBP3.32□□□□□ -1.88
SMG1-207ENST00000563235 WDR87Q6ZQQ6 2873 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 IGHV1OR15-9A0A0B4J2B8 117 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 PIGBOS1A0A0B4J2F0 54 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 A6NED7 52 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 MPV17P39210 176 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 GNB1P62873 340 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 RNASE13Q5GAN3 156 aaKnown RBP3.32□□□□□ -1.88
SMG1-207ENST00000563235 LYPD5Q6UWN5 251 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 SCGB3A1Q96QR1 104 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 MGST2Q99735 147 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 RETNLBQ9BQ08 111 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 IGSF10Q6WRI0 2623 aa3.32□□□□□ -1.88
SMG1-207ENST00000563235 TENM4Q6N022 2769 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 A0A1B0GWA3 101 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 SRRM5B3KS81 715 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 APCSP02743 223 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 RPL27AP46776 148 aaKnown RBP3.31□□□□□ -1.88
SMG1-207ENST00000563235 V9GYV3 84 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 PCSK5Q92824 1860 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 IGKV1D-33P01593 117 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 IGKV1-33P01594 117 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 SMIM13P0DJ93 91 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 DEFA4P12838 97 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 ARL2-SNX15V9GYD0 113 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 PTPRBP23467 1997 aa3.31□□□□□ -1.88
SMG1-207ENST00000563235 A8MWP4 228 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 SLC48A1Q6P1K1 146 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 Q8IYB0 196 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 C20orf203Q8NBC4 194 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 FGF22Q9HCT0 170 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 PCNX2A6NKB5 2137 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 SMIM27A0A1W2PRY6 76 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 TRGV3P03979 118 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 ZNF20P17024 532 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 CD52P31358 61 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 PSMG4Q5JS54 123 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 ARHGAP5-AS1Q96IT6 56 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 CAMK2N2Q96S95 79 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 MYO15AQ9UKN7 3530 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 IGHV1-24A0A0C4DH33 117 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 C11orf94C9JXX5 98 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 LINC01565O15544 149 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 IGHV3-23P01764 117 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 CRIP3Q6Q6R5 217 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 FAM19A2Q8N3H0 131 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 LHFPL6Q9Y693 200 aa3.3□□□□□ -1.88
SMG1-207ENST00000563235 ITPR1Q14643 2758 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 THADAQ6YHU6 1953 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 IGKV1D-42A0A075B6H8 117 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 GNRH2O43555 120 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 DEFB103AP81534 67 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 Q8NBF4 154 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 COL5A1P20908 1838 aaPredicted RBP3.29□□□□□ -1.88
SMG1-207ENST00000563235 MUC4Q99102 2169 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 MYO9AB2RTY4 2548 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 IGLV1-51P01701 117 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 SPINT3P49223 89 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 ATP5EP56381 51 aaPredicted RBP3.29□□□□□ -1.88
SMG1-207ENST00000563235 CNEP1R1Q8N9A8 125 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 LINC01600Q96MT4 127 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 HILPDAQ9Y5L2 63 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 DOPEY1Q5JWR5 2465 aa3.29□□□□□ -1.88
SMG1-207ENST00000563235 IGKV2D-26A0A0A0MRZ7 120 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 A0A1B0GW54 56 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 PPYP01298 95 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 LINC01006Q8NI28 216 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 SPEGQ15772 3267 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 PTPN13Q12923 2485 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 SCN3AQ9NY46 2000 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 C19orf84I3L1E1 186 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 DSCR4P56555 118 aaPredicted RBP3.28□□□□□ -1.88
SMG1-207ENST00000563235 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.28□□□□□ -1.88
SMG1-207ENST00000563235 FAM223AQ8IWN6 122 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 LINC00269Q8N2A0 174 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 Q8N814 137 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 DNAH12Q6ZR08 3092 aa3.28□□□□□ -1.88
SMG1-207ENST00000563235 A0A087X002 238 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 PATE4P0C8F1 98 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 RPL28P46779 137 aaKnown RBP3.27□□□□□ -1.89
SMG1-207ENST00000563235 Q1T7F1 81 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 C2orf66Q6UXQ4 117 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 BPESC1Q9GZL8 116 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 NDUFA12Q9UI09 145 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 GTF3C1Q12789 2109 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 IGLV3-1P01715 115 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 TFF1P04155 84 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 CRIP2P52943 208 aaPredicted RBP3.27□□□□□ -1.89
SMG1-207ENST00000563235 KIF26BQ2KJY2 2108 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 FAM229BQ4G0N7 80 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 TET1Q8NFU7 2136 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 CIRBP-AS1Q8TBR5 109 aa3.27□□□□□ -1.89
SMG1-207ENST00000563235 TRGV9Q99603 122 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms