RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 PET117Q6UWS5 81 aa3.96□□□□□ -1.78
CDH13-206ENST00000562601 OR2D3Q8NGH3 330 aa3.96□□□□□ -1.78
CDH13-206ENST00000562601 OR10AG1Q8NH19 301 aa3.96□□□□□ -1.78
CDH13-206ENST00000562601 LYPD6BQ8NI32 183 aa3.96□□□□□ -1.78
CDH13-206ENST00000562601 OCC1Q8TAD7 63 aa3.96□□□□□ -1.78
CDH13-206ENST00000562601 SFRP2Q96HF1 295 aa3.96□□□□□ -1.78
CDH13-206ENST00000562601 PRADC1Q9BSG0 188 aa3.96□□□□□ -1.78
CDH13-206ENST00000562601 CTDSP1Q9GZU7 261 aa3.96□□□□□ -1.78
CDH13-206ENST00000562601 EIF5A2Q9GZV4 153 aaKnown RBP3.96□□□□□ -1.78
CDH13-206ENST00000562601 TRBV6-4A0A1B0GX49 114 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 C19orf71A6NCJ1 209 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 P01737 135 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 CRYGDP07320 174 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 RHOHQ15669 191 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 SPANXN1Q5VSR9 72 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 TEX261Q6UWH6 196 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 ZFP2Q6ZN57 461 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 WFDC10BQ8IUB3 73 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 ZFP82Q8N141 532 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
CDH13-206ENST00000562601 UPK3BQ9BT76 320 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 RNASE7Q9H1E1 156 aaKnown RBP3.95□□□□□ -1.78
CDH13-206ENST00000562601 MSRB1Q9NZV6 116 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 KIAA1109Q2LD37 5005 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
CDH13-206ENST00000562601 C9JQL5 133 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 SNAI2O43623 268 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 CIDEAO60543 219 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 SRP19P09132 144 aaKnown RBP3.94□□□□□ -1.78
CDH13-206ENST00000562601 TAGLN2P37802 199 aaKnown RBP3.94□□□□□ -1.78
CDH13-206ENST00000562601 ZNF56Q15929 161 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 OR10J3Q5JRS4 329 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 PIK3CD-AS1Q5SR53 167 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 LYZL1Q6UWQ5 148 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 C6orf223Q8N319 242 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 FER1L6-AS1Q8NA97 138 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 ATP6V0E2Q8NHE4 81 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 FAM210AQ96ND0 272 aa3.94□□□□□ -1.78
CDH13-206ENST00000562601 A0A1B0GVY2 172 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 TMEM250H0YL14 139 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 RHODO00212 210 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 GATCO43716 136 aaKnown RBP3.93□□□□□ -1.78
CDH13-206ENST00000562601 IGHV3-30P01768 117 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 IGHV3-33P01772 117 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 CXCL1P09341 107 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 OR5AL1P0C617 328 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 IGLC6P0CF74 106 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 IGHV3-30-3P0DP02 117 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 IGHV3-30-5P0DP03 117 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 LINC00315P59091 139 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 RPS20P60866 119 aaKnown RBP3.93□□□□□ -1.78
CDH13-206ENST00000562601 SOHLH1Q5JUK2 328 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 LINC00336Q6ZUF6 198 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 NRACQ8N912 160 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 SMIM12Q96EX1 92 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 SMIM7Q9BQ49 75 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 GTSF1LQ9H1H1 148 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 RPP21Q9H633 154 aaKnown RBP3.93□□□□□ -1.78
CDH13-206ENST00000562601 BIN3Q9NQY0 253 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 LY96Q9Y6Y9 160 aa3.93□□□□□ -1.78
CDH13-206ENST00000562601 TRAV8-6A0A0B4J262 113 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 IGHV3-38A0A0C4DH36 116 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 A0A1W2PPQ1 181 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 XKRY2A2RUG3 117 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 ZNF727A8MUV8 499 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 USP17L23D6RBM5 183 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 MGPP08493 103 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 SMIM17P0DL12 118 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 LINC00694P0DN24 101 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 NTF3P20783 257 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 ERVFC1-1P60608 527 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 RAB4BP61018 213 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 TTC32Q5I0X7 151 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 SH2D6Q7Z4S9 175 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 PGLYRP4Q96LB8 373 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 KIF25-AS1Q9Y6Z4 181 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 HERC2O95714 4834 aa3.92□□□□□ -1.78
CDH13-206ENST00000562601 LRP1BQ9NZR2 4599 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 TRAV9-2A0A087WT02 112 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 DNAH10OSP0CZ25 163 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 RYR1P21817 5038 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 EVI2AP22794 236 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 FUSP35637 526 aaKnown RBP eCLIP3.91□□□□□ -1.78
CDH13-206ENST00000562601 FOXA3P55318 350 aaPredicted RBP3.91□□□□□ -1.78
CDH13-206ENST00000562601 CACNG7P62955 275 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 PEA15Q15121 130 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 TMEM241Q24JQ0 296 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 LELP1Q5T871 98 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 LINC01551Q86U37 167 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 NEXN-AS1Q8NBZ9 246 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 DEFB104AQ8WTQ1 72 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 GTSF1Q8WW33 167 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 AP1S3Q96PC3 154 aa3.91□□□□□ -1.78
CDH13-206ENST00000562601 TRBV7-3A0A075B6L6 115 aa3.9□□□□□ -1.79
CDH13-206ENST00000562601 TRAV26-2A0A0B4J265 109 aa3.9□□□□□ -1.79
CDH13-206ENST00000562601 IGLV5-39A0A0G2JS06 123 aa3.9□□□□□ -1.79
CDH13-206ENST00000562601 F2Z2F3 143 aa3.9□□□□□ -1.79
CDH13-206ENST00000562601 UBE2D3P61077 147 aa3.9□□□□□ -1.79
CDH13-206ENST00000562601 RPL23P62829 140 aaKnown RBP3.9□□□□□ -1.79
CDH13-206ENST00000562601 UBE2D2P62837 147 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms