RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 C7orf77A4D0Y5 90 aa11.25□□□□□ -0.61
USB1-206ENST00000562534 CAMPP49913 170 aa11.25□□□□□ -0.61
USB1-206ENST00000562534 UBE2D3P61077 147 aa11.25□□□□□ -0.61
USB1-206ENST00000562534 UBE2D2P62837 147 aa11.25□□□□□ -0.61
USB1-206ENST00000562534 RHEBQ15382 184 aa11.25□□□□□ -0.61
USB1-206ENST00000562534 ATP5L2Q7Z4Y8 100 aa11.25□□□□□ -0.61
USB1-206ENST00000562534 TRAV8-6A0A0B4J262 113 aa11.24□□□□□ -0.61
USB1-206ENST00000562534 APOC3P02656 99 aa11.24□□□□□ -0.61
USB1-206ENST00000562534 RAB4AP20338 218 aa11.24□□□□□ -0.61
USB1-206ENST00000562534 HBBP68871 147 aa11.24□□□□□ -0.61
USB1-206ENST00000562534 MRPL54Q6P161 138 aaKnown RBP11.24□□□□□ -0.61
USB1-206ENST00000562534 KCNIP4Q6PIL6 250 aa11.24□□□□□ -0.61
USB1-206ENST00000562534 SVBPQ8N300 66 aa11.24□□□□□ -0.61
USB1-206ENST00000562534 GATD1Q8NB37 220 aa11.24□□□□□ -0.61
USB1-206ENST00000562534 BTF3L4Q96K17 158 aa11.24□□□□□ -0.61
USB1-206ENST00000562534 SIVA1O15304 175 aa11.23□□□□□ -0.61
USB1-206ENST00000562534 SNAPINO95295 136 aa11.23□□□□□ -0.61
USB1-206ENST00000562534 LELP1Q5T871 98 aa11.23□□□□□ -0.61
USB1-206ENST00000562534 DAZ4Q86SG3 579 aaKnown RBP11.23□□□□□ -0.61
USB1-206ENST00000562534 SLC7A5P1Q8MH63 180 aa11.23□□□□□ -0.61
USB1-206ENST00000562534 RPS10P5Q9NQ39 176 aa11.23□□□□□ -0.61
USB1-206ENST00000562534 DAZ3Q9NR90 486 aaKnown RBP11.23□□□□□ -0.61
USB1-206ENST00000562534 A0A1B0GXF2 115 aa11.22□□□□□ -0.61
USB1-206ENST00000562534 S100PP25815 95 aa11.22□□□□□ -0.61
USB1-206ENST00000562534 TMEM97Q5BJF2 176 aa11.22□□□□□ -0.61
USB1-206ENST00000562534 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
USB1-206ENST00000562534 AMN1Q8IY45 258 aa11.22□□□□□ -0.61
USB1-206ENST00000562534 MRAP2Q96G30 205 aa11.22□□□□□ -0.61
USB1-206ENST00000562534 RNF185Q96GF1 192 aa11.22□□□□□ -0.61
USB1-206ENST00000562534 TRAV9-1A0A075B6T8 112 aa11.21□□□□□ -0.61
USB1-206ENST00000562534 TRAV26-2A0A0B4J265 109 aa11.21□□□□□ -0.61
USB1-206ENST00000562534 OR10J3Q5JRS4 329 aa11.21□□□□□ -0.61
USB1-206ENST00000562534 IGLV2-18A0A075B6J9 118 aa11.2□□□□□ -0.62
USB1-206ENST00000562534 TRAV9-2A0A087WT02 112 aa11.2□□□□□ -0.62
USB1-206ENST00000562534 K7EP13 123 aa11.2□□□□□ -0.62
USB1-206ENST00000562534 PPP1R17O96001 155 aa11.2□□□□□ -0.62
USB1-206ENST00000562534 LYSTQ99698 3801 aa11.19□□□□□ -0.62
USB1-206ENST00000562534 KMT2CQ8NEZ4 4911 aaKnown RBP11.18□□□□□ -0.62
USB1-206ENST00000562534 TRBV6-8A0A0A6YYG3 113 aa11.18□□□□□ -0.62
USB1-206ENST00000562534 IGHV3-38A0A0C4DH36 116 aa11.18□□□□□ -0.62
USB1-206ENST00000562534 TRBV6-5A0A0K0K1A5 114 aa11.18□□□□□ -0.62
USB1-206ENST00000562534 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
USB1-206ENST00000562534 M0R2N4 97 aa11.18□□□□□ -0.62
USB1-206ENST00000562534 TTC32Q5I0X7 151 aa11.18□□□□□ -0.62
USB1-206ENST00000562534 Q6ZR54 194 aa11.18□□□□□ -0.62
USB1-206ENST00000562534 ALMS1Q8TCU4 4167 aa11.17□□□□□ -0.62
USB1-206ENST00000562534 PPBPP02775 128 aa11.17□□□□□ -0.62
USB1-206ENST00000562534 DNAH10OSP0CZ25 163 aa11.17□□□□□ -0.62
USB1-206ENST00000562534 MRPL51Q4U2R6 128 aaKnown RBP11.17□□□□□ -0.62
USB1-206ENST00000562534 WFDC10BQ8IUB3 73 aa11.17□□□□□ -0.62
USB1-206ENST00000562534 RPL39LQ96EH5 51 aaKnown RBP11.17□□□□□ -0.62
USB1-206ENST00000562534 CKS2P33552 79 aa11.16□□□□□ -0.62
USB1-206ENST00000562534 ST20Q9HBF5 79 aa11.16□□□□□ -0.62
USB1-206ENST00000562534 URGCP-MRPS24S4R325 110 aa11.16□□□□□ -0.62
USB1-206ENST00000562534 BTF3P20290 206 aaKnown RBP11.15□□□□□ -0.62
USB1-206ENST00000562534 TRBV25-1A0A075B6N4 114 aa11.14□□□□□ -0.63
USB1-206ENST00000562534 SDHAF1A6NFY7 115 aa11.14□□□□□ -0.63
USB1-206ENST00000562534 GAS8-AS1O95177 125 aa11.14□□□□□ -0.63
USB1-206ENST00000562534 PMCHP20382 165 aa11.14□□□□□ -0.63
USB1-206ENST00000562534 COTL1Q14019 142 aa11.14□□□□□ -0.63
USB1-206ENST00000562534 COX19Q49B96 90 aa11.14□□□□□ -0.63
USB1-206ENST00000562534 LINC01556Q5JQF7 62 aa11.14□□□□□ -0.63
USB1-206ENST00000562534 NTM-AS1Q6ZSK4 140 aa11.14□□□□□ -0.63
USB1-206ENST00000562534 C10orf126Q8N4M7 172 aa11.14□□□□□ -0.63
USB1-206ENST00000562534 DNAH1Q9P2D7 4330 aa11.13□□□□□ -0.63
USB1-206ENST00000562534 TRBV24-1A0A075B6N3 115 aa11.13□□□□□ -0.63
USB1-206ENST00000562534 IGHV1-24A0A0C4DH33 117 aa11.13□□□□□ -0.63
USB1-206ENST00000562534 I3L3M4 83 aa11.13□□□□□ -0.63
USB1-206ENST00000562534 VCYO14598 125 aa11.13□□□□□ -0.63
USB1-206ENST00000562534 RPS10P46783 165 aaKnown RBP11.13□□□□□ -0.63
USB1-206ENST00000562534 PKIAP61925 76 aa11.13□□□□□ -0.63
USB1-206ENST00000562534 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
USB1-206ENST00000562534 VPS13DQ5THJ4 4388 aa11.13□□□□□ -0.63
USB1-206ENST00000562534 TMEM262E9PQX1 116 aa11.12□□□□□ -0.63
USB1-206ENST00000562534 SMKR1H3BMG3 65 aa11.12□□□□□ -0.63
USB1-206ENST00000562534 NCR2O95944 276 aa11.12□□□□□ -0.63
USB1-206ENST00000562534 POLR2KP53803 58 aaKnown RBP11.12□□□□□ -0.63
USB1-206ENST00000562534 IQCJQ1A5X6 159 aa11.12□□□□□ -0.63
USB1-206ENST00000562534 C1orf134Q5TEV5 83 aa11.12□□□□□ -0.63
USB1-206ENST00000562534 TMEM136Q6ZRR5 245 aa11.12□□□□□ -0.63
USB1-206ENST00000562534 ORMDL3Q8N138 153 aa11.12□□□□□ -0.63
USB1-206ENST00000562534 NRACQ8N912 160 aa11.12□□□□□ -0.63
USB1-206ENST00000562534 TMEM70Q9BUB7 260 aa11.12□□□□□ -0.63
USB1-206ENST00000562534 A0A087WX48 190 aa11.11□□□□□ -0.63
USB1-206ENST00000562534 D6R8Y8 96 aa11.11□□□□□ -0.63
USB1-206ENST00000562534 PHOX2AO14813 284 aa11.11□□□□□ -0.63
USB1-206ENST00000562534 SUMO2P61956 95 aaKnown RBP11.11□□□□□ -0.63
USB1-206ENST00000562534 NIT1Q86X76 327 aa11.11□□□□□ -0.63
USB1-206ENST00000562534 CHCHD5Q9BSY4 110 aa11.11□□□□□ -0.63
USB1-206ENST00000562534 CHCHD7Q9BUK0 85 aa11.11□□□□□ -0.63
USB1-206ENST00000562534 GNB1LQ9BYB4 327 aa11.11□□□□□ -0.63
USB1-206ENST00000562534 SACSQ9NZJ4 4579 aa11.1□□□□□ -0.63
USB1-206ENST00000562534 TRBV27A0A0K0K1C4 114 aa11.1□□□□□ -0.63
USB1-206ENST00000562534 TNFRSF6BO95407 300 aa11.1□□□□□ -0.63
USB1-206ENST00000562534 IGHV3-30P01768 117 aa11.1□□□□□ -0.63
USB1-206ENST00000562534 IGHV3-33P01772 117 aa11.1□□□□□ -0.63
USB1-206ENST00000562534 IGHV3-30-3P0DP02 117 aa11.1□□□□□ -0.63
USB1-206ENST00000562534 IGHV3-30-5P0DP03 117 aa11.1□□□□□ -0.63
USB1-206ENST00000562534 LAMTOR2Q9Y2Q5 125 aa11.1□□□□□ -0.63
USB1-206ENST00000562534 HLA-DQA1P01909 254 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms