RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 UBE2WQ96B02 151 aa6.3□□□□□ -1.4
NSMCE1-203ENST00000562039 NUDT11Q96G61 164 aa6.3□□□□□ -1.4
NSMCE1-203ENST00000562039 RNASE7Q9H1E1 156 aaKnown RBP6.3□□□□□ -1.4
NSMCE1-203ENST00000562039 A0A087WX48 190 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 TRBV10-1A0A0K0K1A3 114 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 K7EN84 100 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 XGP55808 180 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 GAGE6Q13070 117 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 LINC01620Q4KN68 170 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 SUMO4Q6EEV6 95 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 CLPSL2Q6UWE3 100 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 LYZL1Q6UWQ5 148 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 Q8N814 137 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 C15orf54Q8N8G6 183 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 OCC1Q8TAD7 63 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 AP1S3Q96PC3 154 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 CHCHD5Q9BSY4 110 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 KIF25-AS1Q9Y6Z4 181 aa6.29□□□□□ -1.4
NSMCE1-203ENST00000562039 TRBV6-8A0A0A6YYG3 113 aa6.28□□□□□ -1.4
NSMCE1-203ENST00000562039 RPS20P60866 119 aaKnown RBP6.28□□□□□ -1.4
NSMCE1-203ENST00000562039 MPV17L2Q567V2 206 aa6.28□□□□□ -1.4
NSMCE1-203ENST00000562039 TOR2AQ5JU69 321 aa6.28□□□□□ -1.4
NSMCE1-203ENST00000562039 CDPF1Q6NVV7 123 aa6.28□□□□□ -1.4
NSMCE1-203ENST00000562039 KCNIP4Q6PIL6 250 aa6.28□□□□□ -1.4
NSMCE1-203ENST00000562039 NTM-AS1Q6ZSK4 140 aa6.28□□□□□ -1.4
NSMCE1-203ENST00000562039 Q8N1X5 172 aa6.28□□□□□ -1.4
NSMCE1-203ENST00000562039 Q8N976 141 aa6.28□□□□□ -1.4
NSMCE1-203ENST00000562039 TM2D2Q9BX73 214 aa6.28□□□□□ -1.4
NSMCE1-203ENST00000562039 FAT1Q14517 4588 aa6.27□□□□□ -1.41
NSMCE1-203ENST00000562039 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
NSMCE1-203ENST00000562039 NTF3P20783 257 aa6.27□□□□□ -1.41
NSMCE1-203ENST00000562039 LAGE3Q14657 143 aa6.27□□□□□ -1.41
NSMCE1-203ENST00000562039 TWIST1Q15672 202 aa6.27□□□□□ -1.41
NSMCE1-203ENST00000562039 OR10G8Q8NGN5 311 aa6.27□□□□□ -1.41
NSMCE1-203ENST00000562039 FAM30AQ9NZY2 134 aa6.27□□□□□ -1.41
NSMCE1-203ENST00000562039 DNAH8Q96JB1 4490 aa6.27□□□□□ -1.41
NSMCE1-203ENST00000562039 ANGP03950 147 aaKnown RBP6.26□□□□□ -1.41
NSMCE1-203ENST00000562039 FOXA3P55318 350 aaPredicted RBP6.26□□□□□ -1.41
NSMCE1-203ENST00000562039 CACNG7P62955 275 aa6.26□□□□□ -1.41
NSMCE1-203ENST00000562039 BLOC1S1P78537 153 aa6.26□□□□□ -1.41
NSMCE1-203ENST00000562039 ATRAIDQ6UW56 229 aa6.26□□□□□ -1.41
NSMCE1-203ENST00000562039 EIF5A2Q9GZV4 153 aaKnown RBP6.26□□□□□ -1.41
NSMCE1-203ENST00000562039 RPP21Q9H633 154 aaKnown RBP6.26□□□□□ -1.41
NSMCE1-203ENST00000562039 TRAV26-2A0A0B4J265 109 aa6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 XKRY2A2RUG3 117 aa6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 EPM2AB3EWF7 344 aa6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 M0QY20 66 aa6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 GATCO43716 136 aaKnown RBP6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 CRPP02741 224 aa6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 ENHOQ6UWT2 76 aa6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 GTSF1Q8WW33 167 aa6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 SMIM12Q96EX1 92 aa6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 PGLYRP4Q96LB8 373 aa6.25□□□□□ -1.41
NSMCE1-203ENST00000562039 F2Z2F3 143 aa6.24□□□□□ -1.41
NSMCE1-203ENST00000562039 HLA-DQA1P01909 254 aa6.24□□□□□ -1.41
NSMCE1-203ENST00000562039 TRGC1P0CF51 173 aa6.24□□□□□ -1.41
NSMCE1-203ENST00000562039 RBX1P62877 108 aa6.24□□□□□ -1.41
NSMCE1-203ENST00000562039 RASL11AQ6T310 242 aa6.24□□□□□ -1.41
NSMCE1-203ENST00000562039 RMI2Q96E14 147 aa6.24□□□□□ -1.41
NSMCE1-203ENST00000562039 DPH3P1Q9H4G8 78 aa6.24□□□□□ -1.41
NSMCE1-203ENST00000562039 BIN3Q9NQY0 253 aa6.24□□□□□ -1.41
NSMCE1-203ENST00000562039 IGLV10-54A0A075B6I4 117 aa6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 TRBV25-1A0A075B6N4 114 aa6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 IGHV1-24A0A0C4DH33 117 aa6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 TAGLN2P37802 199 aaKnown RBP6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 CTRLP40313 264 aa6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 ELOBQ15370 118 aa6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 Q5VSD8 79 aa6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 LINC00269Q8N2A0 174 aa6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 NTN5Q8WTR8 489 aaPredicted RBP6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 RPL39LQ96EH5 51 aaKnown RBP6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 SMIM7Q9BQ49 75 aa6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 C1orf43Q9BWL3 253 aa6.23□□□□□ -1.41
NSMCE1-203ENST00000562039 IGKV3OR2-268A0A0C4DH90 116 aa6.22□□□□□ -1.41
NSMCE1-203ENST00000562039 TMEM250H0YL14 139 aa6.22□□□□□ -1.41
NSMCE1-203ENST00000562039 H7C1H1 209 aa6.22□□□□□ -1.41
NSMCE1-203ENST00000562039 SRP19P09132 144 aaKnown RBP6.22□□□□□ -1.41
NSMCE1-203ENST00000562039 GATD1Q8NB37 220 aa6.22□□□□□ -1.41
NSMCE1-203ENST00000562039 LYPD6BQ8NI32 183 aa6.22□□□□□ -1.41
NSMCE1-203ENST00000562039 FRZBQ92765 325 aa6.22□□□□□ -1.41
NSMCE1-203ENST00000562039 GFRA4Q9GZZ7 299 aa6.22□□□□□ -1.41
NSMCE1-203ENST00000562039 IGLV4-60A0A075B6I1 120 aa6.21□□□□□ -1.42
NSMCE1-203ENST00000562039 ZNF727A8MUV8 499 aa6.21□□□□□ -1.42
NSMCE1-203ENST00000562039 GAS8-AS1O95177 125 aa6.21□□□□□ -1.42
NSMCE1-203ENST00000562039 INAFM2P0DMQ5 153 aa6.21□□□□□ -1.42
NSMCE1-203ENST00000562039 Q0VG73 95 aa6.21□□□□□ -1.42
NSMCE1-203ENST00000562039 FAM210AQ96ND0 272 aa6.21□□□□□ -1.42
NSMCE1-203ENST00000562039 CHCHD7Q9BUK0 85 aa6.21□□□□□ -1.42
NSMCE1-203ENST00000562039 NIT2Q9NQR4 276 aa6.21□□□□□ -1.42
NSMCE1-203ENST00000562039 COX11Q9Y6N1 276 aa6.21□□□□□ -1.42
NSMCE1-203ENST00000562039 C9JQL5 133 aa6.2□□□□□ -1.42
NSMCE1-203ENST00000562039 USP17L23D6RBM5 183 aa6.2□□□□□ -1.42
NSMCE1-203ENST00000562039 AMTP48728 403 aa6.2□□□□□ -1.42
NSMCE1-203ENST00000562039 SRSF3P84103 164 aaKnown RBP6.2□□□□□ -1.42
NSMCE1-203ENST00000562039 IQCJQ1A5X6 159 aa6.2□□□□□ -1.42
NSMCE1-203ENST00000562039 TMEM97Q5BJF2 176 aa6.2□□□□□ -1.42
NSMCE1-203ENST00000562039 C20orf203Q8NBC4 194 aa6.2□□□□□ -1.42
NSMCE1-203ENST00000562039 TMEM243Q9BU79 118 aa6.2□□□□□ -1.42
NSMCE1-203ENST00000562039 VPS13BQ7Z7G8 4022 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms