RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 H3BVH4 76 aa12.24□□□□□ -0.45
COMMD4-204ENST00000561662 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
COMMD4-204ENST00000561662 NUP35Q8NFH5 326 aa12.24□□□□□ -0.45
COMMD4-204ENST00000561662 DEFB104AQ8WTQ1 72 aa12.24□□□□□ -0.45
COMMD4-204ENST00000561662 YPEL4Q96NS1 127 aa12.24□□□□□ -0.45
COMMD4-204ENST00000561662 LYZL1Q6UWQ5 148 aa12.23□□□□□ -0.45
COMMD4-204ENST00000561662 PTH2Q96A98 100 aa12.23□□□□□ -0.45
COMMD4-204ENST00000561662 NAT8BQ9UHF3 227 aa12.23□□□□□ -0.45
COMMD4-204ENST00000561662 FAT3Q8TDW7 4589 aa12.22□□□□□ -0.45
COMMD4-204ENST00000561662 F2Z2F3 143 aa12.22□□□□□ -0.45
COMMD4-204ENST00000561662 PSCAO43653 123 aa12.22□□□□□ -0.45
COMMD4-204ENST00000561662 S100A4P26447 101 aaKnown RBP12.22□□□□□ -0.45
COMMD4-204ENST00000561662 WDR73Q6P4I2 378 aa12.22□□□□□ -0.45
COMMD4-204ENST00000561662 PGLYRP4Q96LB8 373 aa12.22□□□□□ -0.45
COMMD4-204ENST00000561662 LRCOL1A6NCL2 159 aa12.21□□□□□ -0.45
COMMD4-204ENST00000561662 SPINK4O60575 86 aa12.21□□□□□ -0.45
COMMD4-204ENST00000561662 EVI2AP22794 236 aa12.21□□□□□ -0.45
COMMD4-204ENST00000561662 OR10AG1Q8NH19 301 aa12.21□□□□□ -0.45
COMMD4-204ENST00000561662 SPXQ9BT56 116 aa12.21□□□□□ -0.45
COMMD4-204ENST00000561662 MRPL16Q9NX20 251 aaKnown RBP12.21□□□□□ -0.45
COMMD4-204ENST00000561662 SCO1O75880 301 aa12.2□□□□□ -0.46
COMMD4-204ENST00000561662 CRYGDP07320 174 aa12.2□□□□□ -0.46
COMMD4-204ENST00000561662 CBLN2Q8IUK8 224 aa12.2□□□□□ -0.46
COMMD4-204ENST00000561662 SMCO4Q9NRQ5 59 aa12.2□□□□□ -0.46
COMMD4-204ENST00000561662 TRAV9-1A0A075B6T8 112 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 MUC21A0A0G2JKD1 596 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 MUC21A0A140T8X8 626 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 M0R2P5 195 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 CRYBA4P53673 196 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 MRPL23Q16540 153 aaKnown RBP12.19□□□□□ -0.46
COMMD4-204ENST00000561662 PIK3CD-AS1Q5SR53 167 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 DMRTA1Q5VZB9 504 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 NTN5Q8WTR8 489 aaPredicted RBP12.19□□□□□ -0.46
COMMD4-204ENST00000561662 RASL10AQ92737 203 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 TPPP3Q9BW30 176 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 PRO0255Q9UI72 69 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 HHLA3Q9XRX5 114 aa12.19□□□□□ -0.46
COMMD4-204ENST00000561662 A0A1B0GUT8 65 aa12.18□□□□□ -0.46
COMMD4-204ENST00000561662 A0A1B0GXF2 115 aa12.18□□□□□ -0.46
COMMD4-204ENST00000561662 CACNG7P62955 275 aa12.18□□□□□ -0.46
COMMD4-204ENST00000561662 ELOBQ15370 118 aa12.18□□□□□ -0.46
COMMD4-204ENST00000561662 KCNIP4Q6PIL6 250 aa12.18□□□□□ -0.46
COMMD4-204ENST00000561662 Q8N814 137 aa12.18□□□□□ -0.46
COMMD4-204ENST00000561662 PHLDA3Q9Y5J5 127 aa12.18□□□□□ -0.46
COMMD4-204ENST00000561662 URGCP-MRPS24S4R325 110 aa12.18□□□□□ -0.46
COMMD4-204ENST00000561662 FHL2Q14192 279 aa12.17□□□□□ -0.46
COMMD4-204ENST00000561662 ZFP82Q8N141 532 aa12.17□□□□□ -0.46
COMMD4-204ENST00000561662 Q9HAA7 133 aa12.17□□□□□ -0.46
COMMD4-204ENST00000561662 K7EQD1 137 aa12.16□□□□□ -0.46
COMMD4-204ENST00000561662 NTF3P20783 257 aa12.16□□□□□ -0.46
COMMD4-204ENST00000561662 S100PP25815 95 aa12.16□□□□□ -0.46
COMMD4-204ENST00000561662 SRIP30626 198 aa12.16□□□□□ -0.46
COMMD4-204ENST00000561662 ZNF876PQ49A33 203 aa12.16□□□□□ -0.46
COMMD4-204ENST00000561662 BTF3L4Q96K17 158 aa12.16□□□□□ -0.46
COMMD4-204ENST00000561662 TRBV24-1A0A075B6N3 115 aa12.15□□□□□ -0.46
COMMD4-204ENST00000561662 M0R381 172 aa12.15□□□□□ -0.46
COMMD4-204ENST00000561662 ATP5L2Q7Z4Y8 100 aa12.15□□□□□ -0.46
COMMD4-204ENST00000561662 GATD1Q8NB37 220 aa12.15□□□□□ -0.46
COMMD4-204ENST00000561662 TGIF2-C20orf24A0A0A6YYL0 155 aa12.14□□□□□ -0.47
COMMD4-204ENST00000561662 RIGQ13278 110 aa12.14□□□□□ -0.47
COMMD4-204ENST00000561662 SPANXN1Q5VSR9 72 aa12.14□□□□□ -0.47
COMMD4-204ENST00000561662 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
COMMD4-204ENST00000561662 TRGV4A0A0C4DH28 118 aa12.13□□□□□ -0.47
COMMD4-204ENST00000561662 GYPEP15421 78 aa12.13□□□□□ -0.47
COMMD4-204ENST00000561662 SSTP61278 116 aa12.13□□□□□ -0.47
COMMD4-204ENST00000561662 TWIST1Q15672 202 aa12.13□□□□□ -0.47
COMMD4-204ENST00000561662 MRPL54Q6P161 138 aaKnown RBP12.13□□□□□ -0.47
COMMD4-204ENST00000561662 BORCS7Q96B45 105 aa12.13□□□□□ -0.47
COMMD4-204ENST00000561662 JPT2Q9H910 190 aa12.13□□□□□ -0.47
COMMD4-204ENST00000561662 A0A1B0GW15 77 aa12.12□□□□□ -0.47
COMMD4-204ENST00000561662 COLCA2A8K830 154 aa12.12□□□□□ -0.47
COMMD4-204ENST00000561662 RS1O15537 224 aa12.12□□□□□ -0.47
COMMD4-204ENST00000561662 WFDC2Q14508 124 aa12.12□□□□□ -0.47
COMMD4-204ENST00000561662 LINC01620Q4KN68 170 aa12.12□□□□□ -0.47
COMMD4-204ENST00000561662 UFSP1Q6NVU6 142 aa12.12□□□□□ -0.47
COMMD4-204ENST00000561662 RASL11AQ6T310 242 aa12.12□□□□□ -0.47
COMMD4-204ENST00000561662 C10orf126Q8N4M7 172 aa12.12□□□□□ -0.47
COMMD4-204ENST00000561662 K7EP13 123 aa12.11□□□□□ -0.47
COMMD4-204ENST00000561662 HBBP68871 147 aa12.11□□□□□ -0.47
COMMD4-204ENST00000561662 SLAQ13239 276 aa12.11□□□□□ -0.47
COMMD4-204ENST00000561662 CFAP126Q5VTH2 177 aa12.11□□□□□ -0.47
COMMD4-204ENST00000561662 SAMD10Q9BYL1 202 aa12.11□□□□□ -0.47
COMMD4-204ENST00000561662 RNF213Q63HN8 5207 aa12.11□□□□□ -0.47
COMMD4-204ENST00000561662 A8MWV9 139 aa12.1□□□□□ -0.47
COMMD4-204ENST00000561662 OXTP01178 125 aa12.1□□□□□ -0.47
COMMD4-204ENST00000561662 KRTAP10-4P60372 401 aaPredicted RBP12.1□□□□□ -0.47
COMMD4-204ENST00000561662 Q6ZSA8 131 aa12.1□□□□□ -0.47
COMMD4-204ENST00000561662 ZNF479Q96JC4 524 aa12.1□□□□□ -0.47
COMMD4-204ENST00000561662 TMEM191AQ9H0A3 160 aa12.1□□□□□ -0.47
COMMD4-204ENST00000561662 LECT2O14960 151 aa12.09□□□□□ -0.47
COMMD4-204ENST00000561662 TRGC1P0CF51 173 aa12.09□□□□□ -0.47
COMMD4-204ENST00000561662 CAMPP49913 170 aa12.09□□□□□ -0.47
COMMD4-204ENST00000561662 TMEM136Q6ZRR5 245 aa12.09□□□□□ -0.47
COMMD4-204ENST00000561662 SCXQ7RTU7 201 aa12.09□□□□□ -0.47
COMMD4-204ENST00000561662 C14orf178Q8N769 122 aaPredicted RBP12.09□□□□□ -0.47
COMMD4-204ENST00000561662 AP1S3Q96PC3 154 aa12.09□□□□□ -0.47
COMMD4-204ENST00000561662 TRAV4A0A0B4J268 109 aa12.08□□□□□ -0.48
COMMD4-204ENST00000561662 LOC100131303A0A0U1RQF7 123 aa12.08□□□□□ -0.48
COMMD4-204ENST00000561662 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms