RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 Q8N3U1 123 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 C15orf54Q8N8G6 183 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 TRBV10-1A0A0K0K1A3 114 aa6.87□□□□□ -1.31
HERC1-212ENST00000561348 DNAH10OSP0CZ25 163 aa6.87□□□□□ -1.31
HERC1-212ENST00000561348 SUMO4Q6EEV6 95 aa6.87□□□□□ -1.31
HERC1-212ENST00000561348 NEXN-AS1Q8NBZ9 246 aa6.87□□□□□ -1.31
HERC1-212ENST00000561348 GTSF1Q8WW33 167 aa6.87□□□□□ -1.31
HERC1-212ENST00000561348 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
HERC1-212ENST00000561348 FRAS1Q86XX4 4008 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 DNAH10Q8IVF4 4471 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 A0A087WWC5 75 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 A0A087WX48 190 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 H7C1H1 209 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 TIRAPP58753 221 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 UBE2D3P61077 147 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 UBE2D2P62837 147 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 NFE4Q86UQ8 179 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 C10orf126Q8N4M7 172 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 CHCHD5Q9BSY4 110 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 DPH3P1Q9H4G8 78 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 NAT8Q9UHE5 227 aa6.86□□□□□ -1.31
HERC1-212ENST00000561348 TRAV26-2A0A0B4J265 109 aa6.85□□□□□ -1.31
HERC1-212ENST00000561348 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
HERC1-212ENST00000561348 FUSP35637 526 aaKnown RBP eCLIP6.85□□□□□ -1.31
HERC1-212ENST00000561348 CTRLP40313 264 aa6.85□□□□□ -1.31
HERC1-212ENST00000561348 FOXA3P55318 350 aaPredicted RBP6.85□□□□□ -1.31
HERC1-212ENST00000561348 RPL23P62829 140 aaKnown RBP6.85□□□□□ -1.31
HERC1-212ENST00000561348 FAM74A3Q4VXF1 159 aa6.85□□□□□ -1.31
HERC1-212ENST00000561348 LINC01556Q5JQF7 62 aa6.85□□□□□ -1.31
HERC1-212ENST00000561348 UQCC3Q6UW78 93 aa6.85□□□□□ -1.31
HERC1-212ENST00000561348 FAM231DQ6ZW35 169 aa6.85□□□□□ -1.31
HERC1-212ENST00000561348 SPATA12Q7Z6I5 190 aa6.85□□□□□ -1.31
HERC1-212ENST00000561348 DAZ4Q86SG3 579 aaKnown RBP6.85□□□□□ -1.31
HERC1-212ENST00000561348 OR10G8Q8NGN5 311 aa6.85□□□□□ -1.31
HERC1-212ENST00000561348 DAZ3Q9NR90 486 aaKnown RBP6.85□□□□□ -1.31
HERC1-212ENST00000561348 KIF25-AS1Q9Y6Z4 181 aa6.85□□□□□ -1.31
HERC1-212ENST00000561348 HIGD1CA8MV81 97 aa6.84□□□□□ -1.31
HERC1-212ENST00000561348 C16orf90A8MZG2 172 aa6.84□□□□□ -1.31
HERC1-212ENST00000561348 LINC00694P0DN24 101 aa6.84□□□□□ -1.31
HERC1-212ENST00000561348 RASL11AQ6T310 242 aa6.84□□□□□ -1.31
HERC1-212ENST00000561348 OSTCQ9NRP0 149 aa6.84□□□□□ -1.31
HERC1-212ENST00000561348 KLK12Q9UKR0 248 aa6.84□□□□□ -1.31
HERC1-212ENST00000561348 M0QY20 66 aa6.83□□□□□ -1.32
HERC1-212ENST00000561348 GAGE6Q13070 117 aa6.83□□□□□ -1.32
HERC1-212ENST00000561348 TSKUQ8WUA8 353 aa6.83□□□□□ -1.32
HERC1-212ENST00000561348 ISOC2Q96AB3 205 aa6.83□□□□□ -1.32
HERC1-212ENST00000561348 TRBV6-8A0A0A6YYG3 113 aa6.82□□□□□ -1.32
HERC1-212ENST00000561348 A0A1B0GUT8 65 aa6.82□□□□□ -1.32
HERC1-212ENST00000561348 IBA57-AS1B1ANH7 110 aa6.82□□□□□ -1.32
HERC1-212ENST00000561348 WDR73Q6P4I2 378 aa6.82□□□□□ -1.32
HERC1-212ENST00000561348 NIT1Q86X76 327 aa6.82□□□□□ -1.32
HERC1-212ENST00000561348 UBE2WQ96B02 151 aa6.82□□□□□ -1.32
HERC1-212ENST00000561348 DNAJC30Q96LL9 226 aa6.82□□□□□ -1.32
HERC1-212ENST00000561348 NIT2Q9NQR4 276 aa6.82□□□□□ -1.32
HERC1-212ENST00000561348 V9GYV3 84 aa6.82□□□□□ -1.32
HERC1-212ENST00000561348 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 TRBV25-1A0A075B6N4 114 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 K7EP13 123 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 LECT2O14960 151 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 NDUFS6O75380 124 aaKnown RBP6.81□□□□□ -1.32
HERC1-212ENST00000561348 SCO1O75880 301 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 ANGP03950 147 aaKnown RBP6.81□□□□□ -1.32
HERC1-212ENST00000561348 CAMPP49913 170 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 RIGQ13278 110 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 CT83Q5H943 113 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 CLPSL2Q6UWE3 100 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 Q6ZRN7 208 aaPredicted RBP6.81□□□□□ -1.32
HERC1-212ENST00000561348 GATD1Q8NB37 220 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 RPL39LQ96EH5 51 aaKnown RBP6.81□□□□□ -1.32
HERC1-212ENST00000561348 SMDT1Q9H4I9 107 aa6.81□□□□□ -1.32
HERC1-212ENST00000561348 TMA7Q9Y2S6 64 aaKnown RBP6.81□□□□□ -1.32
HERC1-212ENST00000561348 TRAV8-3A0A0A6YYJ7 113 aa6.8□□□□□ -1.32
HERC1-212ENST00000561348 IGHV1-24A0A0C4DH33 117 aa6.8□□□□□ -1.32
HERC1-212ENST00000561348 UBE2L6O14933 153 aa6.8□□□□□ -1.32
HERC1-212ENST00000561348 CRPP02741 224 aa6.8□□□□□ -1.32
HERC1-212ENST00000561348 BTF3P20290 206 aaKnown RBP6.8□□□□□ -1.32
HERC1-212ENST00000561348 TMEM97Q5BJF2 176 aa6.8□□□□□ -1.32
HERC1-212ENST00000561348 NTM-AS1Q6ZSK4 140 aa6.8□□□□□ -1.32
HERC1-212ENST00000561348 Q8N976 141 aa6.8□□□□□ -1.32
HERC1-212ENST00000561348 NUP35Q8NFH5 326 aa6.8□□□□□ -1.32
HERC1-212ENST00000561348 GFRA4Q9GZZ7 299 aa6.8□□□□□ -1.32
HERC1-212ENST00000561348 NAT8BQ9UHF3 227 aa6.8□□□□□ -1.32
HERC1-212ENST00000561348 A0A087WTM6 91 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 TMEM218A2RU14 115 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 APOC3P02656 99 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 AMTP48728 403 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 COTL1Q14019 142 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 ELOBQ15370 118 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 MPV17L2Q567V2 206 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 MRPL54Q6P161 138 aaKnown RBP6.79□□□□□ -1.32
HERC1-212ENST00000561348 ATRAIDQ6UW56 229 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 AMN1Q8IY45 258 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 TM2D2Q9BX73 214 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 CNFNQ9BYD5 112 aa6.79□□□□□ -1.32
HERC1-212ENST00000561348 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
HERC1-212ENST00000561348 SMKR1H3BMG3 65 aa6.78□□□□□ -1.32
HERC1-212ENST00000561348 NCR2O95944 276 aa6.78□□□□□ -1.32
HERC1-212ENST00000561348 PMCHP20382 165 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 157.9 ms