RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CKS2P33552 79 aa7.44□□□□□ -1.22
TPM1-229ENST00000561242 TIRAPP58753 221 aa7.44□□□□□ -1.22
TPM1-229ENST00000561242 COTL1Q14019 142 aa7.44□□□□□ -1.22
TPM1-229ENST00000561242 SUMO4Q6EEV6 95 aa7.44□□□□□ -1.22
TPM1-229ENST00000561242 ATP5L2Q7Z4Y8 100 aa7.44□□□□□ -1.22
TPM1-229ENST00000561242 IMMP2LQ96T52 175 aa7.44□□□□□ -1.22
TPM1-229ENST00000561242 CHCHD5Q9BSY4 110 aa7.44□□□□□ -1.22
TPM1-229ENST00000561242 CNFNQ9BYD5 112 aa7.44□□□□□ -1.22
TPM1-229ENST00000561242 ST20Q9HBF5 79 aa7.44□□□□□ -1.22
TPM1-229ENST00000561242 TRBV25-1A0A075B6N4 114 aa7.43□□□□□ -1.22
TPM1-229ENST00000561242 IGHV3-38A0A0C4DH36 116 aa7.43□□□□□ -1.22
TPM1-229ENST00000561242 EREGO14944 169 aa7.43□□□□□ -1.22
TPM1-229ENST00000561242 FCER1GP30273 86 aa7.43□□□□□ -1.22
TPM1-229ENST00000561242 COX19Q49B96 90 aa7.43□□□□□ -1.22
TPM1-229ENST00000561242 C1orf134Q5TEV5 83 aa7.43□□□□□ -1.22
TPM1-229ENST00000561242 NFE4Q86UQ8 179 aa7.43□□□□□ -1.22
TPM1-229ENST00000561242 NBEAL2Q6ZNJ1 2754 aa7.43□□□□□ -1.22
TPM1-229ENST00000561242 IGHV1-24A0A0C4DH33 117 aa7.42□□□□□ -1.22
TPM1-229ENST00000561242 TCAPO15273 167 aa7.42□□□□□ -1.22
TPM1-229ENST00000561242 PSCAO43653 123 aa7.42□□□□□ -1.22
TPM1-229ENST00000561242 PPBPP02775 128 aa7.42□□□□□ -1.22
TPM1-229ENST00000561242 Q6ZSN1 163 aa7.42□□□□□ -1.22
TPM1-229ENST00000561242 RMI2Q96E14 147 aa7.42□□□□□ -1.22
TPM1-229ENST00000561242 KIR2DL4Q99706 377 aa7.42□□□□□ -1.22
TPM1-229ENST00000561242 UPK3BQ9BT76 320 aa7.42□□□□□ -1.22
TPM1-229ENST00000561242 TRAV9-1A0A075B6T8 112 aa7.41□□□□□ -1.22
TPM1-229ENST00000561242 NBDYA0A0U1RRE5 68 aa7.41□□□□□ -1.22
TPM1-229ENST00000561242 M0QY20 66 aa7.41□□□□□ -1.22
TPM1-229ENST00000561242 RAB5AP20339 215 aa7.41□□□□□ -1.22
TPM1-229ENST00000561242 AMMECR1LQ6DCA0 310 aa7.41□□□□□ -1.22
TPM1-229ENST00000561242 UFSP1Q6NVU6 142 aa7.41□□□□□ -1.22
TPM1-229ENST00000561242 NEXN-AS1Q8NBZ9 246 aa7.41□□□□□ -1.22
TPM1-229ENST00000561242 CLRN3Q8NCR9 226 aa7.41□□□□□ -1.22
TPM1-229ENST00000561242 TMEM18Q96B42 140 aa7.41□□□□□ -1.22
TPM1-229ENST00000561242 C7orf77A4D0Y5 90 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 I3L3M4 83 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 VCYO14598 125 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 CRPP02741 224 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 AMTP48728 403 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 UBE2D3P61077 147 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 UBE2D2P62837 147 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 AMN1Q8IY45 258 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 TMEM101Q96IK0 257 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 TM2D2Q9BX73 214 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 TMEM242Q9NWH2 141 aa7.4□□□□□ -1.22
TPM1-229ENST00000561242 CARHSP1Q9Y2V2 147 aaKnown RBP7.4□□□□□ -1.22
TPM1-229ENST00000561242 IGHV3-30P01768 117 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 IGHV3-33P01772 117 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 APCSP02743 223 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 IGHV3-30-3P0DP02 117 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 IGHV3-30-5P0DP03 117 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 BTF3P20290 206 aaKnown RBP7.39□□□□□ -1.23
TPM1-229ENST00000561242 RAB4AP20338 218 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 FAM104BQ5XKR9 115 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 DGAT2L7PQ6IED9 249 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 ZNF575Q86XF7 245 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 ORMDL3Q8N138 153 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 C6orf223Q8N319 242 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 TMEM243Q9BU79 118 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 KIF25-AS1Q9Y6Z4 181 aa7.39□□□□□ -1.23
TPM1-229ENST00000561242 TRBV6-8A0A0A6YYG3 113 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 TRAV8-3A0A0A6YYJ7 113 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 TRAV26-2A0A0B4J265 109 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 NCR2O95944 276 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 G0S2P27469 103 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 TMEM136Q6ZRR5 245 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 LINC00336Q6ZUF6 198 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 GATD1Q8NB37 220 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 CHCHD7Q9BUK0 85 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 KRTAP3-3Q9BYR6 98 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 KRTAP3-2Q9BYR7 98 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 COX11Q9Y6N1 276 aa7.38□□□□□ -1.23
TPM1-229ENST00000561242 SDHAF1A6NFY7 115 aa7.37□□□□□ -1.23
TPM1-229ENST00000561242 HLA-DQA1P01909 254 aa7.37□□□□□ -1.23
TPM1-229ENST00000561242 RNASEKQ6P5S7 137 aaKnown RBP7.37□□□□□ -1.23
TPM1-229ENST00000561242 PRKDCP78527 4128 aaKnown RBP7.37□□□□□ -1.23
TPM1-229ENST00000561242 TGP01266 2768 aa7.37□□□□□ -1.23
TPM1-229ENST00000561242 MT-ND6P03923 174 aa7.36□□□□□ -1.23
TPM1-229ENST00000561242 ANGP03950 147 aaKnown RBP7.36□□□□□ -1.23
TPM1-229ENST00000561242 Q0VG73 95 aa7.36□□□□□ -1.23
TPM1-229ENST00000561242 GAGE6Q13070 117 aa7.36□□□□□ -1.23
TPM1-229ENST00000561242 MRPL51Q4U2R6 128 aaKnown RBP7.36□□□□□ -1.23
TPM1-229ENST00000561242 LINC01556Q5JQF7 62 aa7.36□□□□□ -1.23
TPM1-229ENST00000561242 WFDC10BQ8IUB3 73 aa7.36□□□□□ -1.23
TPM1-229ENST00000561242 PRELID3AQ96N28 172 aa7.36□□□□□ -1.23
TPM1-229ENST00000561242 C20orf78Q9BR46 151 aa7.36□□□□□ -1.23
TPM1-229ENST00000561242 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
TPM1-229ENST00000561242 LAMTOR2Q9Y2Q5 125 aa7.36□□□□□ -1.23
TPM1-229ENST00000561242 D6R8Y8 96 aa7.35□□□□□ -1.23
TPM1-229ENST00000561242 PHOX2AO14813 284 aa7.35□□□□□ -1.23
TPM1-229ENST00000561242 DNAH10OSP0CZ25 163 aa7.35□□□□□ -1.23
TPM1-229ENST00000561242 ADCYAP1P18509 176 aa7.35□□□□□ -1.23
TPM1-229ENST00000561242 LINC00315P59091 139 aa7.35□□□□□ -1.23
TPM1-229ENST00000561242 SUMO2P61956 95 aaKnown RBP7.35□□□□□ -1.23
TPM1-229ENST00000561242 FABP9Q0Z7S8 132 aa7.35□□□□□ -1.23
TPM1-229ENST00000561242 C10orf91Q5T1B1 145 aa7.35□□□□□ -1.23
TPM1-229ENST00000561242 RPL39LQ96EH5 51 aaKnown RBP7.35□□□□□ -1.23
TPM1-229ENST00000561242 Q9HAA7 133 aa7.35□□□□□ -1.23
TPM1-229ENST00000561242 SMCO4Q9NRQ5 59 aa7.35□□□□□ -1.23
TPM1-229ENST00000561242 TRBV6-5A0A0K0K1A5 114 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms