RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 LRCOL1A6NCL2 159 aa6.66□□□□□ -1.34
TPM1-225ENST00000560679 KRTAP10-4P60372 401 aaPredicted RBP6.66□□□□□ -1.34
TPM1-225ENST00000560679 HBBP68871 147 aa6.66□□□□□ -1.34
TPM1-225ENST00000560679 DAZ2Q13117 558 aaKnown RBP6.66□□□□□ -1.34
TPM1-225ENST00000560679 SAPCD1Q5SSQ6 148 aa6.66□□□□□ -1.34
TPM1-225ENST00000560679 DEFB104AQ8WTQ1 72 aa6.66□□□□□ -1.34
TPM1-225ENST00000560679 GTSF1Q8WW33 167 aa6.66□□□□□ -1.34
TPM1-225ENST00000560679 MRPL53Q96EL3 112 aaKnown RBP6.66□□□□□ -1.34
TPM1-225ENST00000560679 C20orf144Q9BQM9 153 aa6.66□□□□□ -1.34
TPM1-225ENST00000560679 PPP1R14DQ9NXH3 145 aa6.66□□□□□ -1.34
TPM1-225ENST00000560679 MSRB1Q9NZV6 116 aa6.66□□□□□ -1.34
TPM1-225ENST00000560679 TP53TG3Q9ULZ0 132 aa6.66□□□□□ -1.34
TPM1-225ENST00000560679 RBAKDNA6NC62 111 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 PRAC2D3DTV9 90 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 SERF1AO75920 110 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 PLA2G1BP04054 148 aaKnown RBP6.65□□□□□ -1.34
TPM1-225ENST00000560679 SRIP30626 198 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 LINC00310P59036 64 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 OR10J3Q5JRS4 329 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 Q6ZSA8 131 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 BAGE3Q86Y29 109 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 WFDC10BQ8IUB3 73 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 C11orf72Q8NBR9 251 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 NTN5Q8WTR8 489 aaPredicted RBP6.65□□□□□ -1.34
TPM1-225ENST00000560679 PGLYRP4Q96LB8 373 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 C8orf49Q96NF6 230 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 NDFIP1Q9BT67 221 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 ICOSQ9Y6W8 199 aa6.65□□□□□ -1.34
TPM1-225ENST00000560679 LRP2P98164 4655 aa6.64□□□□□ -1.35
TPM1-225ENST00000560679 SH2D1AO60880 128 aa6.64□□□□□ -1.35
TPM1-225ENST00000560679 CRIP1P50238 77 aa6.64□□□□□ -1.35
TPM1-225ENST00000560679 RPS20P60866 119 aaKnown RBP6.64□□□□□ -1.35
TPM1-225ENST00000560679 SLAQ13239 276 aa6.64□□□□□ -1.35
TPM1-225ENST00000560679 JOSD1Q15040 202 aaPredicted RBP6.64□□□□□ -1.35
TPM1-225ENST00000560679 KIAA1644Q3SXP7 199 aa6.64□□□□□ -1.35
TPM1-225ENST00000560679 FAM162BQ5T6X4 162 aa6.64□□□□□ -1.35
TPM1-225ENST00000560679 Q6AWC8 147 aa6.64□□□□□ -1.35
TPM1-225ENST00000560679 LYPD5Q6UWN5 251 aa6.64□□□□□ -1.35
TPM1-225ENST00000560679 VGLL1Q99990 258 aa6.64□□□□□ -1.35
TPM1-225ENST00000560679 GSN-AS1Q9NRJ2 163 aa6.64□□□□□ -1.35
TPM1-225ENST00000560679 TRGV2A0A075B6R0 118 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 A0A1B0GW15 77 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 F2Z2F3 143 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 PAX4O43316 350 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 NUPR1O60356 82 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 ZNF324O75467 553 aaPredicted RBP6.63□□□□□ -1.35
TPM1-225ENST00000560679 GZMBP10144 247 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 CAMPP49913 170 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 FOXA3P55318 350 aaPredicted RBP6.63□□□□□ -1.35
TPM1-225ENST00000560679 RIGQ13278 110 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 Q8N814 137 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 GATD1Q8NB37 220 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 Q8TAT8 98 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 KCNS1Q96KK3 526 aa6.63□□□□□ -1.35
TPM1-225ENST00000560679 TRGV1A0A0A0MS02 117 aa6.62□□□□□ -1.35
TPM1-225ENST00000560679 TRAV12-3A0A0B4J271 114 aa6.62□□□□□ -1.35
TPM1-225ENST00000560679 A0A1B0GUT8 65 aa6.62□□□□□ -1.35
TPM1-225ENST00000560679 J3KRW8 73 aa6.62□□□□□ -1.35
TPM1-225ENST00000560679 C18orf32Q8TCD1 76 aa6.62□□□□□ -1.35
TPM1-225ENST00000560679 BORCS7Q96B45 105 aa6.62□□□□□ -1.35
TPM1-225ENST00000560679 ALKBH7Q9BT30 221 aaPredicted RBP6.62□□□□□ -1.35
TPM1-225ENST00000560679 SSBP4Q9BWG4 385 aaPredicted RBP6.62□□□□□ -1.35
TPM1-225ENST00000560679 TRAV9-2A0A087WT02 112 aa6.61□□□□□ -1.35
TPM1-225ENST00000560679 OXTP01178 125 aa6.61□□□□□ -1.35
TPM1-225ENST00000560679 IGHV3-53P01767 116 aa6.61□□□□□ -1.35
TPM1-225ENST00000560679 ARMS2P0C7Q2 107 aa6.61□□□□□ -1.35
TPM1-225ENST00000560679 ZNF138P52744 262 aa6.61□□□□□ -1.35
TPM1-225ENST00000560679 CRYBA4P53673 196 aa6.61□□□□□ -1.35
TPM1-225ENST00000560679 ERCC8Q13216 396 aa6.61□□□□□ -1.35
TPM1-225ENST00000560679 TMEM78Q5T7P6 136 aa6.61□□□□□ -1.35
TPM1-225ENST00000560679 SAMD10Q9BYL1 202 aa6.61□□□□□ -1.35
TPM1-225ENST00000560679 K7EP13 123 aa6.6□□□□□ -1.35
TPM1-225ENST00000560679 CRYGDP07320 174 aa6.6□□□□□ -1.35
TPM1-225ENST00000560679 CTRLP40313 264 aa6.6□□□□□ -1.35
TPM1-225ENST00000560679 ZNF80P51504 273 aaPredicted RBP6.6□□□□□ -1.35
TPM1-225ENST00000560679 IQCJQ1A5X6 159 aa6.6□□□□□ -1.35
TPM1-225ENST00000560679 C9orf47Q6ZRZ4 202 aa6.6□□□□□ -1.35
TPM1-225ENST00000560679 ODF3Q96PU9 254 aa6.6□□□□□ -1.35
TPM1-225ENST00000560679 AGPAT4-IT1Q9H0P7 198 aa6.6□□□□□ -1.35
TPM1-225ENST00000560679 PRO0255Q9UI72 69 aa6.6□□□□□ -1.35
TPM1-225ENST00000560679 TMSB15BA0A087X1C1 80 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 FABP5P3A8MUU1 101 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 GPX1P07203 203 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 IGLC6P0CF74 106 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 PMCHP20382 165 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 EVI2AP22794 236 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 FHL2Q14192 279 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 WFDC2Q14508 124 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 MRPL23Q16540 153 aaKnown RBP6.59□□□□□ -1.35
TPM1-225ENST00000560679 LINC01559Q495D7 138 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 LYZL1Q6UWQ5 148 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 NEGR1Q7Z3B1 354 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 MRPL16Q9NX20 251 aaKnown RBP6.59□□□□□ -1.35
TPM1-225ENST00000560679 NAGKQ9UJ70 344 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 LENEPQ9Y5L5 61 aa6.59□□□□□ -1.35
TPM1-225ENST00000560679 LINC00587B1AMM8 73 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 K7EQD1 137 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 PSCAO43653 123 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 SCGB1D1O95968 90 aa6.58□□□□□ -1.36
TPM1-225ENST00000560679 LEPP41159 167 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms