RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 CEBPGP53567 150 aa7.76□□□□□ -1.17
RABGGTA-216ENST00000560243 LAGE3Q14657 143 aa7.76□□□□□ -1.17
RABGGTA-216ENST00000560243 RPP21Q9H633 154 aaKnown RBP7.76□□□□□ -1.17
RABGGTA-216ENST00000560243 BIN3Q9NQY0 253 aa7.76□□□□□ -1.17
RABGGTA-216ENST00000560243 TRBV6-8A0A0A6YYG3 113 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 XKRY2A2RUG3 117 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 F2Z2F3 143 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 M0QY20 66 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 NTF3P20783 257 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 CTRLP40313 264 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 KRTAP10-1P60331 282 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 CACNG7P62955 275 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 WFDC2Q14508 124 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 SUMO4Q6EEV6 95 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 NTM-AS1Q6ZSK4 140 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 MAPKAPK5-AS1Q8N8E1 139 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 GTSF1Q8WW33 167 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 KLK12Q9UKR0 248 aa7.75□□□□□ -1.17
RABGGTA-216ENST00000560243 FAM210AQ96ND0 272 aa7.74□□□□□ -1.17
RABGGTA-216ENST00000560243 EIF5A2Q9GZV4 153 aaKnown RBP7.74□□□□□ -1.17
RABGGTA-216ENST00000560243 URGCP-MRPS24S4R325 110 aa7.74□□□□□ -1.17
RABGGTA-216ENST00000560243 A0A087WX48 190 aa7.73□□□□□ -1.17
RABGGTA-216ENST00000560243 TRAV8-3A0A0A6YYJ7 113 aa7.73□□□□□ -1.17
RABGGTA-216ENST00000560243 LECT2O14960 151 aa7.73□□□□□ -1.17
RABGGTA-216ENST00000560243 CDPF1Q6NVV7 123 aa7.73□□□□□ -1.17
RABGGTA-216ENST00000560243 TMEM262E9PQX1 116 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 SRP19P09132 144 aaKnown RBP7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 FOXA3P55318 350 aaPredicted RBP7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 TWIST1Q15672 202 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 MPV17L2Q567V2 206 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 WDR73Q6P4I2 378 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 Q8N814 137 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 DEFB104AQ8WTQ1 72 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 UBE2WQ96B02 151 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 SMIM7Q9BQ49 75 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 TM2D2Q9BX73 214 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 CNFNQ9BYD5 112 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 DPH3P1Q9H4G8 78 aa7.72□□□□□ -1.17
RABGGTA-216ENST00000560243 C9JQL5 133 aa7.71□□□□□ -1.18
RABGGTA-216ENST00000560243 GATCO43716 136 aaKnown RBP7.71□□□□□ -1.18
RABGGTA-216ENST00000560243 TRGC1P0CF51 173 aa7.71□□□□□ -1.18
RABGGTA-216ENST00000560243 RASL11AQ6T310 242 aa7.71□□□□□ -1.18
RABGGTA-216ENST00000560243 FAM231DQ6ZW35 169 aa7.71□□□□□ -1.18
RABGGTA-216ENST00000560243 Q8N976 141 aa7.71□□□□□ -1.18
RABGGTA-216ENST00000560243 BAALCQ8WXS3 180 aa7.71□□□□□ -1.18
RABGGTA-216ENST00000560243 CHCHD5Q9BSY4 110 aa7.71□□□□□ -1.18
RABGGTA-216ENST00000560243 IGKV2D-24A0A075B6R9 120 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 IGLV5-52A0A0A0MRZ9 124 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 TRAV26-2A0A0B4J265 109 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 ZNF727A8MUV8 499 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 GCSHP23434 173 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 XGP55808 180 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 SRSF3P84103 164 aaKnown RBP7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 GAGE6Q13070 117 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 ENHOQ6UWT2 76 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 LINC01551Q86U37 167 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 C15orf54Q8N8G6 183 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 PGLYRP4Q96LB8 373 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 CHCHD7Q9BUK0 85 aa7.7□□□□□ -1.18
RABGGTA-216ENST00000560243 H7C1H1 209 aa7.69□□□□□ -1.18
RABGGTA-216ENST00000560243 NDUFS6O75380 124 aaKnown RBP7.69□□□□□ -1.18
RABGGTA-216ENST00000560243 ATRAIDQ6UW56 229 aa7.69□□□□□ -1.18
RABGGTA-216ENST00000560243 TEX261Q6UWH6 196 aa7.69□□□□□ -1.18
RABGGTA-216ENST00000560243 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.69□□□□□ -1.18
RABGGTA-216ENST00000560243 GATD1Q8NB37 220 aa7.69□□□□□ -1.18
RABGGTA-216ENST00000560243 NIT2Q9NQR4 276 aa7.69□□□□□ -1.18
RABGGTA-216ENST00000560243 FAT1Q14517 4588 aa7.68□□□□□ -1.18
RABGGTA-216ENST00000560243 A8MWL6 223 aa7.68□□□□□ -1.18
RABGGTA-216ENST00000560243 RBX1P62877 108 aa7.68□□□□□ -1.18
RABGGTA-216ENST00000560243 HAMPP81172 84 aa7.68□□□□□ -1.18
RABGGTA-216ENST00000560243 ELOBQ15370 118 aa7.68□□□□□ -1.18
RABGGTA-216ENST00000560243 IQCJQ1A5X6 159 aa7.68□□□□□ -1.18
RABGGTA-216ENST00000560243 KCNIP4Q6PIL6 250 aa7.68□□□□□ -1.18
RABGGTA-216ENST00000560243 Q8N1X5 172 aa7.68□□□□□ -1.18
RABGGTA-216ENST00000560243 NTN5Q8WTR8 489 aaPredicted RBP7.68□□□□□ -1.18
RABGGTA-216ENST00000560243 DNAH8Q96JB1 4490 aa7.68□□□□□ -1.18
RABGGTA-216ENST00000560243 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.67□□□□□ -1.18
RABGGTA-216ENST00000560243 TRBV25-1A0A075B6N4 114 aa7.67□□□□□ -1.18
RABGGTA-216ENST00000560243 IGHV1-24A0A0C4DH33 117 aa7.67□□□□□ -1.18
RABGGTA-216ENST00000560243 ANGP03950 147 aaKnown RBP7.67□□□□□ -1.18
RABGGTA-216ENST00000560243 TMEM97Q5BJF2 176 aa7.67□□□□□ -1.18
RABGGTA-216ENST00000560243 CT83Q5H943 113 aa7.67□□□□□ -1.18
RABGGTA-216ENST00000560243 CLPSL2Q6UWE3 100 aa7.67□□□□□ -1.18
RABGGTA-216ENST00000560243 RMI2Q96E14 147 aa7.67□□□□□ -1.18
RABGGTA-216ENST00000560243 RPL39LQ96EH5 51 aaKnown RBP7.67□□□□□ -1.18
RABGGTA-216ENST00000560243 GAS8-AS1O95177 125 aa7.66□□□□□ -1.18
RABGGTA-216ENST00000560243 LINC01620Q4KN68 170 aa7.66□□□□□ -1.18
RABGGTA-216ENST00000560243 TSKUQ8WUA8 353 aa7.66□□□□□ -1.18
RABGGTA-216ENST00000560243 OSTCQ9NRP0 149 aa7.66□□□□□ -1.18
RABGGTA-216ENST00000560243 COX11Q9Y6N1 276 aa7.66□□□□□ -1.18
RABGGTA-216ENST00000560243 V9GYV3 84 aa7.66□□□□□ -1.18
RABGGTA-216ENST00000560243 HIGD1CA8MV81 97 aa7.65□□□□□ -1.18
RABGGTA-216ENST00000560243 RPL23P62829 140 aaKnown RBP7.65□□□□□ -1.18
RABGGTA-216ENST00000560243 Q0VG73 95 aa7.65□□□□□ -1.18
RABGGTA-216ENST00000560243 TMEM241Q24JQ0 296 aa7.65□□□□□ -1.18
RABGGTA-216ENST00000560243 LINC00269Q8N2A0 174 aa7.65□□□□□ -1.18
RABGGTA-216ENST00000560243 ISOC2Q96AB3 205 aa7.65□□□□□ -1.18
RABGGTA-216ENST00000560243 TMEM243Q9BU79 118 aa7.65□□□□□ -1.18
RABGGTA-216ENST00000560243 PRR34Q9NV39 138 aa7.65□□□□□ -1.18
RABGGTA-216ENST00000560243 FAM30AQ9NZY2 134 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms