RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 TMSB15BA0A087X1C1 80 aa8.17□□□□□ -1.1
RABGGTA-213ENST00000560127 B4DEV8 164 aa8.17□□□□□ -1.1
RABGGTA-213ENST00000560127 H3BVH4 76 aa8.17□□□□□ -1.1
RABGGTA-213ENST00000560127 UFSP1Q6NVU6 142 aa8.17□□□□□ -1.1
RABGGTA-213ENST00000560127 BAGE2Q86Y30 109 aa8.17□□□□□ -1.1
RABGGTA-213ENST00000560127 PTH2Q96A98 100 aa8.17□□□□□ -1.1
RABGGTA-213ENST00000560127 SAMD10Q9BYL1 202 aa8.17□□□□□ -1.1
RABGGTA-213ENST00000560127 JPT2Q9H910 190 aa8.17□□□□□ -1.1
RABGGTA-213ENST00000560127 MUC2Q02817 5179 aa8.16□□□□□ -1.1
RABGGTA-213ENST00000560127 S100A9P06702 114 aaKnown RBP8.16□□□□□ -1.1
RABGGTA-213ENST00000560127 C9orf163Q8N9P6 203 aa8.16□□□□□ -1.1
RABGGTA-213ENST00000560127 LINC01600Q96MT4 127 aa8.16□□□□□ -1.1
RABGGTA-213ENST00000560127 VAX2Q9UIW0 290 aa8.16□□□□□ -1.1
RABGGTA-213ENST00000560127 FAT4Q6V0I7 4981 aa8.15□□□□□ -1.1
RABGGTA-213ENST00000560127 USP17L23D6RBM5 183 aa8.15□□□□□ -1.1
RABGGTA-213ENST00000560127 PRSS1P07477 247 aa8.15□□□□□ -1.1
RABGGTA-213ENST00000560127 ARMS2P0C7Q2 107 aa8.15□□□□□ -1.1
RABGGTA-213ENST00000560127 SDIM1Q6ZPB5 146 aa8.15□□□□□ -1.1
RABGGTA-213ENST00000560127 PARLQ9H300 379 aa8.15□□□□□ -1.1
RABGGTA-213ENST00000560127 DPH3P1Q9H4G8 78 aa8.15□□□□□ -1.1
RABGGTA-213ENST00000560127 IL36BQ9NZH7 164 aa8.15□□□□□ -1.1
RABGGTA-213ENST00000560127 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 TEX46H3BTG2 121 aa8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 PDE6DO43924 150 aa8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 IFNA1P01562 189 aa8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 BLOC1S1P78537 153 aa8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 CIRBPQ14011 172 aaKnown RBP8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 DMRTA1Q5VZB9 504 aa8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 DGAT2L7PQ6IED9 249 aa8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 PRR27Q6MZM9 219 aa8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 C14orf178Q8N769 122 aaPredicted RBP8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 C1orf43Q9BWL3 253 aa8.14□□□□□ -1.11
RABGGTA-213ENST00000560127 A0A087WX48 190 aa8.13□□□□□ -1.11
RABGGTA-213ENST00000560127 K7EN84 100 aa8.13□□□□□ -1.11
RABGGTA-213ENST00000560127 Q0VG73 95 aa8.13□□□□□ -1.11
RABGGTA-213ENST00000560127 ELOBQ15370 118 aa8.13□□□□□ -1.11
RABGGTA-213ENST00000560127 ENHOQ6UWT2 76 aa8.13□□□□□ -1.11
RABGGTA-213ENST00000560127 ZFP2Q6ZN57 461 aa8.13□□□□□ -1.11
RABGGTA-213ENST00000560127 CHCHD7Q9BUK0 85 aa8.13□□□□□ -1.11
RABGGTA-213ENST00000560127 MED9Q9NWA0 146 aa8.13□□□□□ -1.11
RABGGTA-213ENST00000560127 SNAI2O43623 268 aa8.12□□□□□ -1.11
RABGGTA-213ENST00000560127 CXCL1P09341 107 aa8.12□□□□□ -1.11
RABGGTA-213ENST00000560127 PIK3CD-AS1Q5SR53 167 aa8.12□□□□□ -1.11
RABGGTA-213ENST00000560127 TEX261Q6UWH6 196 aa8.12□□□□□ -1.11
RABGGTA-213ENST00000560127 OR10AG1Q8NH19 301 aa8.12□□□□□ -1.11
RABGGTA-213ENST00000560127 C9JQL5 133 aa8.11□□□□□ -1.11
RABGGTA-213ENST00000560127 HLA-DQA1P01909 254 aa8.11□□□□□ -1.11
RABGGTA-213ENST00000560127 IGLC6P0CF74 106 aa8.11□□□□□ -1.11
RABGGTA-213ENST00000560127 GZMBP10144 247 aa8.11□□□□□ -1.11
RABGGTA-213ENST00000560127 S100A4P26447 101 aaKnown RBP8.11□□□□□ -1.11
RABGGTA-213ENST00000560127 TAGLN2P37802 199 aaKnown RBP8.11□□□□□ -1.11
RABGGTA-213ENST00000560127 GNG4P50150 75 aa8.11□□□□□ -1.11
RABGGTA-213ENST00000560127 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
RABGGTA-213ENST00000560127 FAM210AQ96ND0 272 aa8.11□□□□□ -1.11
RABGGTA-213ENST00000560127 SSBP4Q9BWG4 385 aaPredicted RBP8.11□□□□□ -1.11
RABGGTA-213ENST00000560127 MUC21A0A0G2JKD1 596 aa8.1□□□□□ -1.11
RABGGTA-213ENST00000560127 A0A0J9YXV3 536 aa8.1□□□□□ -1.11
RABGGTA-213ENST00000560127 MUC21A0A140T8X8 626 aa8.1□□□□□ -1.11
RABGGTA-213ENST00000560127 A8MWV9 139 aa8.1□□□□□ -1.11
RABGGTA-213ENST00000560127 TMEM250H0YL14 139 aa8.1□□□□□ -1.11
RABGGTA-213ENST00000560127 SRSF3P84103 164 aaKnown RBP8.1□□□□□ -1.11
RABGGTA-213ENST00000560127 SMIM12Q96EX1 92 aa8.1□□□□□ -1.11
RABGGTA-213ENST00000560127 A0A087WYN8 130 aa8.09□□□□□ -1.11
RABGGTA-213ENST00000560127 M0R381 172 aa8.09□□□□□ -1.11
RABGGTA-213ENST00000560127 PHOX2AO14813 284 aa8.09□□□□□ -1.11
RABGGTA-213ENST00000560127 SRP19P09132 144 aaKnown RBP8.09□□□□□ -1.11
RABGGTA-213ENST00000560127 KCNIP4Q6PIL6 250 aa8.09□□□□□ -1.11
RABGGTA-213ENST00000560127 OCC1Q8TAD7 63 aa8.09□□□□□ -1.11
RABGGTA-213ENST00000560127 SFRP2Q96HF1 295 aa8.09□□□□□ -1.11
RABGGTA-213ENST00000560127 A0A087WWL8 130 aa8.08□□□□□ -1.12
RABGGTA-213ENST00000560127 CRPP02741 224 aa8.08□□□□□ -1.12
RABGGTA-213ENST00000560127 OR5AL1P0C617 328 aa8.08□□□□□ -1.12
RABGGTA-213ENST00000560127 CHTF8P0CG12 524 aa8.08□□□□□ -1.12
RABGGTA-213ENST00000560127 C15orf54Q8N8G6 183 aa8.08□□□□□ -1.12
RABGGTA-213ENST00000560127 RNASE7Q9H1E1 156 aaKnown RBP8.08□□□□□ -1.12
RABGGTA-213ENST00000560127 PHLDA3Q9Y5J5 127 aa8.08□□□□□ -1.12
RABGGTA-213ENST00000560127 KIF25-AS1Q9Y6Z4 181 aa8.08□□□□□ -1.12
RABGGTA-213ENST00000560127 KRTAP9-6A0A140TA67 174 aa8.07□□□□□ -1.12
RABGGTA-213ENST00000560127 NDUFS6O75380 124 aaKnown RBP8.07□□□□□ -1.12
RABGGTA-213ENST00000560127 ZFP82Q8N141 532 aa8.07□□□□□ -1.12
RABGGTA-213ENST00000560127 NUDT10Q8NFP7 164 aa8.07□□□□□ -1.12
RABGGTA-213ENST00000560127 OR2D3Q8NGH3 330 aa8.07□□□□□ -1.12
RABGGTA-213ENST00000560127 NUDT11Q96G61 164 aa8.07□□□□□ -1.12
RABGGTA-213ENST00000560127 RNF185Q96GF1 192 aa8.07□□□□□ -1.12
RABGGTA-213ENST00000560127 TMEM262E9PQX1 116 aa8.06□□□□□ -1.12
RABGGTA-213ENST00000560127 MPV17L2Q567V2 206 aa8.06□□□□□ -1.12
RABGGTA-213ENST00000560127 WDR73Q6P4I2 378 aa8.06□□□□□ -1.12
RABGGTA-213ENST00000560127 KRTAP26-1Q6PEX3 210 aa8.06□□□□□ -1.12
RABGGTA-213ENST00000560127 SPACA4Q8TDM5 124 aa8.06□□□□□ -1.12
RABGGTA-213ENST00000560127 DPH3Q96FX2 82 aa8.06□□□□□ -1.12
RABGGTA-213ENST00000560127 P01737 135 aa8.05□□□□□ -1.12
RABGGTA-213ENST00000560127 ANGP03950 147 aaKnown RBP8.05□□□□□ -1.12
RABGGTA-213ENST00000560127 CTRLP40313 264 aa8.05□□□□□ -1.12
RABGGTA-213ENST00000560127 CNBPP62633 177 aaKnown RBP8.05□□□□□ -1.12
RABGGTA-213ENST00000560127 IFITM2Q01629 132 aa8.05□□□□□ -1.12
RABGGTA-213ENST00000560127 FAM74A4Q5TZK3 123 aa8.05□□□□□ -1.12
RABGGTA-213ENST00000560127 GTSF1Q8WW33 167 aa8.05□□□□□ -1.12
RABGGTA-213ENST00000560127 EIF5A2Q9GZV4 153 aaKnown RBP8.05□□□□□ -1.12
RABGGTA-213ENST00000560127 RHODO00212 210 aa8.04□□□□□ -1.12
RABGGTA-213ENST00000560127 CEBPGP53567 150 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms