RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 BAGE2Q86Y30 109 aa12.14□□□□□ -0.47
CDC42BPB-206ENST00000559790 ZNF471Q9BX82 626 aaPredicted RBP12.14□□□□□ -0.47
CDC42BPB-206ENST00000559790 USP17L23D6RBM5 183 aa12.13□□□□□ -0.47
CDC42BPB-206ENST00000559790 HNRNPA3P51991 378 aaKnown RBP12.13□□□□□ -0.47
CDC42BPB-206ENST00000559790 CCL20P78556 96 aa12.13□□□□□ -0.47
CDC42BPB-206ENST00000559790 Q0VG73 95 aa12.13□□□□□ -0.47
CDC42BPB-206ENST00000559790 C11orf52Q96A22 123 aa12.13□□□□□ -0.47
CDC42BPB-206ENST00000559790 C1orf43Q9BWL3 253 aa12.13□□□□□ -0.47
CDC42BPB-206ENST00000559790 HMSDA8MTL9 139 aa12.12□□□□□ -0.47
CDC42BPB-206ENST00000559790 UMAD1C9J7I0 102 aa12.12□□□□□ -0.47
CDC42BPB-206ENST00000559790 PANO1I0J062 215 aa12.12□□□□□ -0.47
CDC42BPB-206ENST00000559790 BCL2L11O43521 198 aa12.12□□□□□ -0.47
CDC42BPB-206ENST00000559790 S100A9P06702 114 aaKnown RBP12.12□□□□□ -0.47
CDC42BPB-206ENST00000559790 PRSS1P07477 247 aa12.12□□□□□ -0.47
CDC42BPB-206ENST00000559790 IGLC6P0CF74 106 aa12.12□□□□□ -0.47
CDC42BPB-206ENST00000559790 RPL35P42766 123 aaKnown RBP12.11□□□□□ -0.47
CDC42BPB-206ENST00000559790 ANGP03950 147 aaKnown RBP12.1□□□□□ -0.47
CDC42BPB-206ENST00000559790 GZMBP10144 247 aa12.1□□□□□ -0.47
CDC42BPB-206ENST00000559790 RBX1P62877 108 aa12.1□□□□□ -0.47
CDC42BPB-206ENST00000559790 CLPSL2Q6UWE3 100 aa12.1□□□□□ -0.47
CDC42BPB-206ENST00000559790 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
CDC42BPB-206ENST00000559790 C19orf71A6NCJ1 209 aa12.09□□□□□ -0.47
CDC42BPB-206ENST00000559790 TMEM262E9PQX1 116 aa12.09□□□□□ -0.47
CDC42BPB-206ENST00000559790 M0QY20 66 aa12.09□□□□□ -0.47
CDC42BPB-206ENST00000559790 HLA-DQA1P01909 254 aa12.09□□□□□ -0.47
CDC42BPB-206ENST00000559790 SPANXN1Q5VSR9 72 aa12.09□□□□□ -0.47
CDC42BPB-206ENST00000559790 CHCHD5Q9BSY4 110 aa12.09□□□□□ -0.47
CDC42BPB-206ENST00000559790 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPB-206ENST00000559790 TRBV20OR9-2A0A075B6H5 130 aa12.08□□□□□ -0.48
CDC42BPB-206ENST00000559790 PFDN1O60925 122 aa12.08□□□□□ -0.48
CDC42BPB-206ENST00000559790 CRPP02741 224 aa12.08□□□□□ -0.48
CDC42BPB-206ENST00000559790 H2AFB1P0C5Y9 115 aa12.08□□□□□ -0.48
CDC42BPB-206ENST00000559790 SSTP61278 116 aa12.08□□□□□ -0.48
CDC42BPB-206ENST00000559790 MIAQ16674 131 aa12.08□□□□□ -0.48
CDC42BPB-206ENST00000559790 IQCJQ1A5X6 159 aa12.08□□□□□ -0.48
CDC42BPB-206ENST00000559790 AP1S3Q96PC3 154 aa12.08□□□□□ -0.48
CDC42BPB-206ENST00000559790 GFRA4Q9GZZ7 299 aa12.08□□□□□ -0.48
CDC42BPB-206ENST00000559790 GAGE6Q13070 117 aa12.07□□□□□ -0.48
CDC42BPB-206ENST00000559790 C14orf177Q52M58 125 aa12.07□□□□□ -0.48
CDC42BPB-206ENST00000559790 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
CDC42BPB-206ENST00000559790 TRAV1-1A0A0B4J248 108 aa12.06□□□□□ -0.48
CDC42BPB-206ENST00000559790 A0A0D9SG52 128 aa12.06□□□□□ -0.48
CDC42BPB-206ENST00000559790 SUMO4Q6EEV6 95 aa12.06□□□□□ -0.48
CDC42BPB-206ENST00000559790 KCNIP4Q6PIL6 250 aa12.06□□□□□ -0.48
CDC42BPB-206ENST00000559790 LINC00269Q8N2A0 174 aa12.06□□□□□ -0.48
CDC42BPB-206ENST00000559790 C9orf163Q8N9P6 203 aa12.06□□□□□ -0.48
CDC42BPB-206ENST00000559790 C20orf203Q8NBC4 194 aa12.06□□□□□ -0.48
CDC42BPB-206ENST00000559790 DAZAP1Q96EP5 407 aaKnown RBP12.06□□□□□ -0.48
CDC42BPB-206ENST00000559790 F5H697 171 aa12.05□□□□□ -0.48
CDC42BPB-206ENST00000559790 KANTRA0A1W2PQU2 76 aa12.04□□□□□ -0.48
CDC42BPB-206ENST00000559790 MANBALQ9NQG1 85 aa12.04□□□□□ -0.48
CDC42BPB-206ENST00000559790 GNG13Q9P2W3 67 aa12.04□□□□□ -0.48
CDC42BPB-206ENST00000559790 IGLV4-60A0A075B6I1 120 aa12.03□□□□□ -0.48
CDC42BPB-206ENST00000559790 RAB19A4D1S5 217 aa12.03□□□□□ -0.48
CDC42BPB-206ENST00000559790 CIRBPQ14011 172 aaKnown RBP12.03□□□□□ -0.48
CDC42BPB-206ENST00000559790 SDIM1Q6ZPB5 146 aa12.03□□□□□ -0.48
CDC42BPB-206ENST00000559790 FER1L6-AS1Q8NA97 138 aa12.03□□□□□ -0.48
CDC42BPB-206ENST00000559790 TRBV25-1A0A075B6N4 114 aa12.02□□□□□ -0.49
CDC42BPB-206ENST00000559790 OXTP01178 125 aa12.02□□□□□ -0.49
CDC42BPB-206ENST00000559790 SLPIP03973 132 aa12.02□□□□□ -0.49
CDC42BPB-206ENST00000559790 PKIAP61925 76 aa12.02□□□□□ -0.49
CDC42BPB-206ENST00000559790 TMEM97Q5BJF2 176 aa12.02□□□□□ -0.49
CDC42BPB-206ENST00000559790 UBR4Q5T4S7 5183 aa12.01□□□□□ -0.49
CDC42BPB-206ENST00000559790 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
CDC42BPB-206ENST00000559790 MGPP08493 103 aa12.01□□□□□ -0.49
CDC42BPB-206ENST00000559790 REG3AQ06141 175 aa12.01□□□□□ -0.49
CDC42BPB-206ENST00000559790 DGAT2L7PQ6IED9 249 aa12.01□□□□□ -0.49
CDC42BPB-206ENST00000559790 OR2D3Q8NGH3 330 aa12.01□□□□□ -0.49
CDC42BPB-206ENST00000559790 IGLV10-54A0A075B6I4 117 aa12□□□□□ -0.49
CDC42BPB-206ENST00000559790 NKX2-5P52952 324 aaPredicted RBP12□□□□□ -0.49
CDC42BPB-206ENST00000559790 RPL37AP61513 92 aaKnown RBP12□□□□□ -0.49
CDC42BPB-206ENST00000559790 SMIM17P0DL12 118 aa11.99□□□□□ -0.49
CDC42BPB-206ENST00000559790 MT1HL1P0DM35 61 aa11.99□□□□□ -0.49
CDC42BPB-206ENST00000559790 CTRLP40313 264 aa11.99□□□□□ -0.49
CDC42BPB-206ENST00000559790 CNBPP62633 177 aaKnown RBP11.99□□□□□ -0.49
CDC42BPB-206ENST00000559790 TPPP3Q9BW30 176 aa11.99□□□□□ -0.49
CDC42BPB-206ENST00000559790 LYZL1Q6UWQ5 148 aa11.98□□□□□ -0.49
CDC42BPB-206ENST00000559790 SMIM12Q96EX1 92 aa11.98□□□□□ -0.49
CDC42BPB-206ENST00000559790 PGLYRP4Q96LB8 373 aa11.98□□□□□ -0.49
CDC42BPB-206ENST00000559790 CNFNQ9BYD5 112 aa11.98□□□□□ -0.49
CDC42BPB-206ENST00000559790 A0A1B0GUV1 79 aa11.97□□□□□ -0.49
CDC42BPB-206ENST00000559790 SULT1A2P50226 295 aa11.97□□□□□ -0.49
CDC42BPB-206ENST00000559790 RPS20P60866 119 aaKnown RBP11.97□□□□□ -0.49
CDC42BPB-206ENST00000559790 CACNG7P62955 275 aa11.97□□□□□ -0.49
CDC42BPB-206ENST00000559790 MEF2BQ02080 365 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPB-206ENST00000559790 RASL11AQ6T310 242 aa11.97□□□□□ -0.49
CDC42BPB-206ENST00000559790 EIF5AP63241 154 aaKnown RBP11.96□□□□□ -0.49
CDC42BPB-206ENST00000559790 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPB-206ENST00000559790 TMEM243Q9BU79 118 aa11.96□□□□□ -0.49
CDC42BPB-206ENST00000559790 H7C1H1 209 aa11.95□□□□□ -0.5
CDC42BPB-206ENST00000559790 K7EN84 100 aa11.95□□□□□ -0.5
CDC42BPB-206ENST00000559790 CHTF8P0CG12 524 aa11.95□□□□□ -0.5
CDC42BPB-206ENST00000559790 BCL2P10415 239 aa11.95□□□□□ -0.5
CDC42BPB-206ENST00000559790 GNG4P50150 75 aa11.95□□□□□ -0.5
CDC42BPB-206ENST00000559790 C15orf56Q8N910 161 aa11.95□□□□□ -0.5
CDC42BPB-206ENST00000559790 DPH3P1Q9H4G8 78 aa11.95□□□□□ -0.5
CDC42BPB-206ENST00000559790 TNXBP22105 4242 aa11.95□□□□□ -0.5
CDC42BPB-206ENST00000559790 P01737 135 aa11.94□□□□□ -0.5
CDC42BPB-206ENST00000559790 NTF3P20783 257 aa11.94□□□□□ -0.5
CDC42BPB-206ENST00000559790 RAB5CP51148 216 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms