RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 TMEM158Q8WZ71 300 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 STAB1Q9NY15 2570 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 IGHV3-16A0A0C4DH30 117 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 IGHV3-53P01767 116 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 HBDP02042 147 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 SYT8Q8NBV8 401 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 GAGE12HA6NDE8 117 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 AMTNQ6UX39 209 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 SH2D6Q7Z4S9 175 aa8□□□□□ -1.13
CSPG4P5-201ENST00000558731 HLA-DRB4P13762 266 aa7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 ODF3L2Q3SX64 289 aa7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 HLA-DRB4X5D2U9 266 aa7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 MUC4Q99102 2169 aa7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 DKK2Q9UBU2 259 aa7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 RBMY1BA6NDE4 496 aaKnown RBP7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 RBMY1EA6NEQ0 496 aaKnown RBP7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 RBMY1DP0C7P1 496 aaKnown RBP7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 UFSP1Q6NVU6 142 aa7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 TMEM160Q9NX00 188 aa7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 MRPL16Q9NX20 251 aaKnown RBP7.99□□□□□ -1.13
CSPG4P5-201ENST00000558731 A0A1B0GWB2 263 aa7.98□□□□□ -1.13
CSPG4P5-201ENST00000558731 PROK1P58294 105 aa7.98□□□□□ -1.13
CSPG4P5-201ENST00000558731 WFDC2Q14508 124 aa7.98□□□□□ -1.13
CSPG4P5-201ENST00000558731 GTSCR1Q86UQ5 136 aa7.98□□□□□ -1.13
CSPG4P5-201ENST00000558731 H3BMG7 143 aa7.98□□□□□ -1.13
CSPG4P5-201ENST00000558731 RBMY1A1P0DJD3 496 aaKnown RBP7.98□□□□□ -1.13
CSPG4P5-201ENST00000558731 RBMY1CP0DJD4 496 aa7.98□□□□□ -1.13
CSPG4P5-201ENST00000558731 FXYD2P54710 66 aa7.98□□□□□ -1.13
CSPG4P5-201ENST00000558731 RBMY1FQ15415 496 aaKnown RBP7.98□□□□□ -1.13
CSPG4P5-201ENST00000558731 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.98□□□□□ -1.13
CSPG4P5-201ENST00000558731 TENM1Q9UKZ4 2725 aa7.97□□□□□ -1.13
CSPG4P5-201ENST00000558731 INSP01308 110 aa7.97□□□□□ -1.13
CSPG4P5-201ENST00000558731 ZNF479Q96JC4 524 aa7.97□□□□□ -1.13
CSPG4P5-201ENST00000558731 HIST1H4GQ99525 98 aa7.97□□□□□ -1.13
CSPG4P5-201ENST00000558731 NXT2Q9NPJ8 142 aaKnown RBP7.97□□□□□ -1.13
CSPG4P5-201ENST00000558731 TRGV11A0A075B6L2 103 aa7.97□□□□□ -1.13
CSPG4P5-201ENST00000558731 GATD1Q8NB37 220 aa7.97□□□□□ -1.13
CSPG4P5-201ENST00000558731 COL6A5A8TX70 2615 aa7.97□□□□□ -1.13
CSPG4P5-201ENST00000558731 SUMO2P61956 95 aaKnown RBP7.96□□□□□ -1.13
CSPG4P5-201ENST00000558731 BOD1L2Q8IYS8 172 aa7.96□□□□□ -1.13
CSPG4P5-201ENST00000558731 TRGV1A0A0A0MS02 117 aa7.96□□□□□ -1.13
CSPG4P5-201ENST00000558731 CHAC1Q9BUX1 264 aa7.96□□□□□ -1.13
CSPG4P5-201ENST00000558731 CNFNQ9BYD5 112 aa7.96□□□□□ -1.13
CSPG4P5-201ENST00000558731 KRTAP10-3P60369 221 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 FAM19A4Q96LR4 140 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 P0DMU3 169 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 FAM231AP0DMU4 169 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 FAM231CP0DMU5 169 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 LAGE3Q14657 143 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 SUMO4Q6EEV6 95 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 VWFP04275 2813 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 TRAV26-1A0A087WT03 109 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 LOC107984156A0A0G2JMH3 177 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 LGALS9BQ3B8N2 356 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 LGALS9CQ6DKI2 356 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 ARL17AQ8IVW1 177 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 C16orf95Q9H693 158 aa7.95□□□□□ -1.14
CSPG4P5-201ENST00000558731 ZC2HC1BQ5TFG8 222 aa7.94□□□□□ -1.14
CSPG4P5-201ENST00000558731 RASL10AQ92737 203 aa7.94□□□□□ -1.14
CSPG4P5-201ENST00000558731 SMIM2Q9BVW6 85 aa7.94□□□□□ -1.14
CSPG4P5-201ENST00000558731 FHL3Q13643 280 aa7.94□□□□□ -1.14
CSPG4P5-201ENST00000558731 GAGE13Q4V321 117 aa7.94□□□□□ -1.14
CSPG4P5-201ENST00000558731 AKAP9Q99996 3911 aa7.94□□□□□ -1.14
CSPG4P5-201ENST00000558731 ZNF415Q09FC8 603 aa7.94□□□□□ -1.14
CSPG4P5-201ENST00000558731 PHLDA1Q8WV24 401 aaPredicted RBP7.94□□□□□ -1.14
CSPG4P5-201ENST00000558731 SCGB3A1Q96QR1 104 aa7.94□□□□□ -1.14
CSPG4P5-201ENST00000558731 TRBV7-9A0A0J9YWB2 115 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 SDHAF1A6NFY7 115 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 FGF6P10767 208 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 Q8N8P6 123 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 MRAP2Q96G30 205 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 KIR2DL4Q99706 377 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 U3KQK5 164 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 IGHV3-38A0A0C4DH36 116 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 CRLF1O75462 422 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 LINC00482Q8N8I6 264 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 NRACQ8N912 160 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 SPATA3Q8NHX4 192 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 GEMIN7Q9H840 131 aaKnown RBP7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 A0A096LNJ9 63 aa7.93□□□□□ -1.14
CSPG4P5-201ENST00000558731 APOMO95445 188 aa7.92□□□□□ -1.14
CSPG4P5-201ENST00000558731 NOTCH1P46531 2555 aa7.92□□□□□ -1.14
CSPG4P5-201ENST00000558731 ANK3Q12955 4377 aaKnown RBP7.92□□□□□ -1.14
CSPG4P5-201ENST00000558731 TRGV2A0A075B6R0 118 aa7.92□□□□□ -1.14
CSPG4P5-201ENST00000558731 NDUFA7O95182 113 aa7.92□□□□□ -1.14
CSPG4P5-201ENST00000558731 IGKCP01834 107 aa7.92□□□□□ -1.14
CSPG4P5-201ENST00000558731 NOP10Q9NPE3 64 aaKnown RBP7.92□□□□□ -1.14
CSPG4P5-201ENST00000558731 IGKV2D-26A0A0A0MRZ7 120 aa7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 CRYBA4P53673 196 aa7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 NDUFA11Q86Y39 141 aa7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 RRN3P1Q2M238 152 aa7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 ODF3Q96PU9 254 aa7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 TRBV25-1A0A075B6N4 114 aa7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 ADARB2-AS1A8MUL3 147 aa7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 RPL39P62891 51 aaKnown RBP7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 C2orf66Q6UXQ4 117 aa7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 SCGB1D4Q6XE38 83 aa7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 TNFRSF18Q9Y5U5 241 aa7.91□□□□□ -1.14
CSPG4P5-201ENST00000558731 TRAV25A0A0B4J276 109 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms