RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ZGRF1Q86YA3 2104 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 LAMB2P55268 1798 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 NCOA2Q15596 1464 aa1.49□□□□□ -2.17
SPG11-206ENST00000558093 XRN1Q8IZH2 1706 aaKnown RBP1.49□□□□□ -2.17
SPG11-206ENST00000558093 PREX1Q8TCU6 1659 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 BAZ2BQ9UIF8 2168 aaKnown RBP1.48□□□□□ -2.17
SPG11-206ENST00000558093 TIAM1Q13009 1591 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 OTOGLQ3ZCN5 2332 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 TRAV17A0A0B4J275 112 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 TRBV10-2A0A0K0K1G8 114 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 CRYM-AS1A6NIL9 109 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 UMAD1C9J7I0 102 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 C17orf112F2Z3M2 114 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 CCL16O15467 120 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 CPSF4O95639 269 aaKnown RBP1.48□□□□□ -2.17
SPG11-206ENST00000558093 LHBP01229 141 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 CRPP02741 224 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 TFF1P04155 84 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 ROMO1P60602 79 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 NNATQ16517 81 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 Q1T7F1 81 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 SPTSSBQ8NFR3 76 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 DYNLRB2Q8TF09 96 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 TRGV9Q99603 122 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 LINC00467Q9BRT7 94 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 NHP2Q9NX24 153 aaKnown RBP1.48□□□□□ -2.17
SPG11-206ENST00000558093 HIGD1BQ9P298 99 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 CDK13Q14004 1512 aaKnown RBP1.48□□□□□ -2.17
SPG11-206ENST00000558093 DUOX2Q9NRD8 1548 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 ATP10BO94823 1461 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 CDK12Q9NYV4 1490 aaPredicted RBP1.48□□□□□ -2.17
SPG11-206ENST00000558093 ANKRD36A6QL64 1941 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 BLMP54132 1417 aaPredicted RBP1.48□□□□□ -2.17
SPG11-206ENST00000558093 SPTBP11277 2137 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 LTBP4Q8N2S1 1624 aa1.48□□□□□ -2.17
SPG11-206ENST00000558093 MDC1Q14676 2089 aaKnown RBP1.47□□□□□ -2.17
SPG11-206ENST00000558093 HEATR5BQ9P2D3 2071 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 PLXNC1O60486 1568 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 DIP2CQ9Y2E4 1556 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 A0A087WWC5 75 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 KANTRA0A1W2PQU2 76 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 C11orf86A6NJI1 115 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 H3BQ85 93 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 H7C2G1 150 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 IGLV6-57P01721 117 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 SFTA3P0C7M3 94 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 ASAH2BP0C7U1 165 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 CD24P25063 80 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 PMCHL1Q16048 86 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 MPV17LQ2QL34 196 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 RPL7L1Q6DKI1 246 aaKnown RBP1.47□□□□□ -2.17
SPG11-206ENST00000558093 CASC2Q6XLA1 102 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 ZCCHC23Q6ZST2 131 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 CMTM2Q8TAZ6 248 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 KLF14Q8TD94 323 aaPredicted RBP1.47□□□□□ -2.17
SPG11-206ENST00000558093 MUCL1Q96DR8 90 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 ODF3Q96PU9 254 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 MRPL35Q9NZE8 188 aaKnown RBP1.47□□□□□ -2.17
SPG11-206ENST00000558093 MINOS1-NBL1R4GNA1 71 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 MROH2AA6NES4 1674 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 CFAP43Q8NDM7 1665 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 TOP2BQ02880 1626 aa1.47□□□□□ -2.17
SPG11-206ENST00000558093 URB2Q14146 1524 aaKnown RBP1.46□□□□□ -2.18
SPG11-206ENST00000558093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.46□□□□□ -2.18
SPG11-206ENST00000558093 CROCC2H7BZ55 1655 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 TSC2P49815 1807 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 PIGBOS1A0A0B4J2F0 54 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 A0A0G2JND7 137 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 A6NIN4 97 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 H3BPC8 53 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 SMIM13P0DJ93 91 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 MPV17P39210 176 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 EFNA4P52798 201 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 FXYD2P54710 66 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 ELOBQ15370 118 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 SLC48A1Q6P1K1 146 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 LYPD5Q6UWN5 251 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 CYP2G1PQ6ZSU1 146 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 FAM215AQ9Y5M1 114 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 PRR14LQ5THK1 2151 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 PIK3C2BO00750 1634 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 LAMC1P11047 1609 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 RNF17Q9BXT8 1623 aaKnown RBP1.46□□□□□ -2.18
SPG11-206ENST00000558093 NUP188Q5SRE5 1749 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 MYO7AQ13402 2215 aa1.46□□□□□ -2.18
SPG11-206ENST00000558093 COL4A6Q14031 1691 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 CTTNBP2Q8WZ74 1663 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 RP1P56715 2156 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 SIP14410 1827 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 ZNF236Q9UL36 1845 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 PTPRMP28827 1452 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 TRAV13-2A0A0B4J235 113 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 IGHV1-18A0A0C4DH31 117 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 A0A1W2PNN7 141 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 HCG22E2RYF7 251 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 IGLV7-43P04211 117 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 SNRPFP62306 86 aaKnown RBP1.45□□□□□ -2.18
SPG11-206ENST00000558093 DEFB113Q30KQ7 82 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 C9orf116Q5BN46 136 aaPredicted RBP1.45□□□□□ -2.18
SPG11-206ENST00000558093 CFAP126Q5VTH2 177 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms