RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 INE1O15225 51 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 CCL25O15444 150 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 DNAL4O96015 105 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 PPYP01298 95 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 GYPBP06028 91 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 KRTAP10-1P60331 282 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 KRTAP10-7P60409 375 aaPredicted RBP1.75□□□□□ -2.13
TDP1-217ENST00000557782 KRTAP13-4Q3LI77 160 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 Q6AWC8 147 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 ZNF625Q96I27 306 aaPredicted RBP1.75□□□□□ -2.13
TDP1-217ENST00000557782 COA4Q9NYJ1 87 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 LRP5O75197 1615 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 ALKQ9UM73 1620 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 CASP8AP2Q9UKL3 1982 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 TNRC6BQ9UPQ9 1833 aaKnown RBP1.75□□□□□ -2.13
TDP1-217ENST00000557782 ATP7BP35670 1465 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 MLH3Q9UHC1 1453 aa1.75□□□□□ -2.13
TDP1-217ENST00000557782 PARP4Q9UKK3 1724 aaKnown RBP1.74□□□□□ -2.13
TDP1-217ENST00000557782 LMO7Q8WWI1 1683 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 A6NIN4 97 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 S100A8P05109 93 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 KRTAP10-10P60014 251 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 C12orf73Q69YU5 71 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 RPL7L1Q6DKI1 246 aaKnown RBP1.74□□□□□ -2.13
TDP1-217ENST00000557782 LYPD5Q6UWN5 251 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 LINC00322Q6ZN03 302 aaPredicted RBP1.74□□□□□ -2.13
TDP1-217ENST00000557782 TMEM141Q96I45 108 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 RPRMQ9NS64 109 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 NDUFA12Q9UI09 145 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 AFDNP55196 1824 aaKnown RBP1.74□□□□□ -2.13
TDP1-217ENST00000557782 CACNA1GO43497 2377 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 UBR1Q8IWV7 1749 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 C5P01031 1676 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 KIF1AQ12756 1690 aa1.74□□□□□ -2.13
TDP1-217ENST00000557782 CEP170BQ9Y4F5 1589 aaPredicted RBP1.73□□□□□ -2.13
TDP1-217ENST00000557782 IGHV3-30P01768 117 aa1.73□□□□□ -2.13
TDP1-217ENST00000557782 IGKCP01834 107 aa1.73□□□□□ -2.13
TDP1-217ENST00000557782 IGHV3-30-5P0DP03 117 aa1.73□□□□□ -2.13
TDP1-217ENST00000557782 SLC25A6P12236 298 aa1.73□□□□□ -2.13
TDP1-217ENST00000557782 CATR1Q13166 79 aa1.73□□□□□ -2.13
TDP1-217ENST00000557782 C9orf153Q5TBE3 101 aa1.73□□□□□ -2.13
TDP1-217ENST00000557782 CSAG1Q6PB30 78 aa1.73□□□□□ -2.13
TDP1-217ENST00000557782 C8orf59Q8N0T1 100 aaPredicted RBP1.73□□□□□ -2.13
TDP1-217ENST00000557782 SVBPQ8N300 66 aa1.73□□□□□ -2.13
TDP1-217ENST00000557782 WFDC10AQ9H1F0 79 aa1.73□□□□□ -2.13
TDP1-217ENST00000557782 ATG5Q9H1Y0 275 aa1.73□□□□□ -2.13
TDP1-217ENST00000557782 MRPL36Q9P0J6 103 aaKnown RBP1.73□□□□□ -2.13
TDP1-217ENST00000557782 COL4A4P53420 1690 aaPredicted RBP1.73□□□□□ -2.13
TDP1-217ENST00000557782 CPSF1Q10570 1443 aaKnown RBP1.73□□□□□ -2.13
TDP1-217ENST00000557782 PHRF1Q9P1Y6 1649 aaKnown RBP1.73□□□□□ -2.13
TDP1-217ENST00000557782 DIP2AQ14689 1571 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 RGPD5Q99666 1765 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 ARFGEF2Q9Y6D5 1785 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 TJP1Q07157 1748 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 LOC110117498A0A087WWA1 95 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 TRBV10-1A0A0K0K1A3 114 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 TMEM218A2RU14 115 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 PRB4P10163 310 aaPredicted RBP1.72□□□□□ -2.13
TDP1-217ENST00000557782 IQCJQ1A5X6 159 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 SLC48A1Q6P1K1 146 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 Q6ZS92 163 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 NDUFA11Q86Y39 141 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 ACBD7Q8N6N7 88 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 LSM10Q969L4 123 aaKnown RBP1.72□□□□□ -2.13
TDP1-217ENST00000557782 DMAC1Q96GE9 116 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 MRPL57Q9BQC6 102 aaKnown RBP1.72□□□□□ -2.13
TDP1-217ENST00000557782 CYSTM1Q9H1C7 97 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 COL5A1P20908 1838 aaPredicted RBP1.72□□□□□ -2.13
TDP1-217ENST00000557782 EDC4Q6P2E9 1401 aaKnown RBP1.72□□□□□ -2.13
TDP1-217ENST00000557782 SCN11AQ9UI33 1791 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 NWD1Q149M9 1564 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 DIP2BQ9P265 1576 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 ZGRF1Q86YA3 2104 aa1.72□□□□□ -2.13
TDP1-217ENST00000557782 C4AP0C0L4 1744 aa1.71□□□□□ -2.13
TDP1-217ENST00000557782 C4BP0C0L5 1744 aa1.71□□□□□ -2.13
TDP1-217ENST00000557782 NUP188Q5SRE5 1749 aa1.71□□□□□ -2.13
TDP1-217ENST00000557782 ABCC6O95255 1503 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 ALS2Q96Q42 1657 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 TRAV23DV6A0A075B6W5 121 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 TRAV30A0A087WSZ9 112 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 TRBV6-7A0A0A0MS04 114 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 IGKV3D-7A0A0C4DH55 119 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 IGKV3OR2-268A0A0C4DH90 116 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 CXorf51AA0A1B0GTR3 108 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 NUPR2A6NF83 97 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 HCRTO43612 131 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 PDE6GP18545 87 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 HSD52Q0P140 79 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 SPATA45Q537H7 98 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 GDF5OSQ5U4N7 250 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 UNQ6190/PRO20217Q6UXQ8 127 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 ZNF563Q8TA94 476 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 LIMD2Q9BT23 127 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 LCE3DQ9BYE3 92 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 BAHCC1Q9P281 2608 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 NWD2Q9ULI1 1742 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 AGLP35573 1532 aa1.71□□□□□ -2.14
TDP1-217ENST00000557782 MRC1P22897 1456 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 MYH8P13535 1937 aa1.7□□□□□ -2.14
TDP1-217ENST00000557782 UQCRHLA0A096LP55 91 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms