RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 MLST8Q9BVC4 326 aa10.28□□□□□ -0.76
SCFD1-224ENST00000557713 ZNF471Q9BX82 626 aaPredicted RBP10.28□□□□□ -0.76
SCFD1-224ENST00000557713 PRR34Q9NV39 138 aa10.28□□□□□ -0.76
SCFD1-224ENST00000557713 S100A9P06702 114 aaKnown RBP10.27□□□□□ -0.77
SCFD1-224ENST00000557713 PKIAP61925 76 aa10.27□□□□□ -0.77
SCFD1-224ENST00000557713 C9orf163Q8N9P6 203 aa10.27□□□□□ -0.77
SCFD1-224ENST00000557713 VAX2Q9UIW0 290 aa10.27□□□□□ -0.77
SCFD1-224ENST00000557713 KIF25-AS1Q9Y6Z4 181 aa10.27□□□□□ -0.77
SCFD1-224ENST00000557713 HLA-DQA1P01909 254 aa10.26□□□□□ -0.77
SCFD1-224ENST00000557713 OR5AL1P0C617 328 aa10.26□□□□□ -0.77
SCFD1-224ENST00000557713 TMEM97Q5BJF2 176 aa10.26□□□□□ -0.77
SCFD1-224ENST00000557713 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.26□□□□□ -0.77
SCFD1-224ENST00000557713 KRTAP3-3Q9BYR6 98 aa10.26□□□□□ -0.77
SCFD1-224ENST00000557713 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
SCFD1-224ENST00000557713 MUC21A0A0G2JKD1 596 aa10.25□□□□□ -0.77
SCFD1-224ENST00000557713 MUC21A0A140T8X8 626 aa10.25□□□□□ -0.77
SCFD1-224ENST00000557713 F5H697 171 aa10.25□□□□□ -0.77
SCFD1-224ENST00000557713 RBX1P62877 108 aa10.25□□□□□ -0.77
SCFD1-224ENST00000557713 MBD3L1Q8WWY6 194 aa10.25□□□□□ -0.77
SCFD1-224ENST00000557713 PLA2G2DQ9UNK4 145 aa10.25□□□□□ -0.77
SCFD1-224ENST00000557713 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.25□□□□□ -0.77
SCFD1-224ENST00000557713 PANO1I0J062 215 aa10.24□□□□□ -0.77
SCFD1-224ENST00000557713 ARPC5O15511 151 aa10.24□□□□□ -0.77
SCFD1-224ENST00000557713 SPANXN1Q5VSR9 72 aa10.24□□□□□ -0.77
SCFD1-224ENST00000557713 SDIM1Q6ZPB5 146 aa10.24□□□□□ -0.77
SCFD1-224ENST00000557713 BAGE2Q86Y30 109 aa10.24□□□□□ -0.77
SCFD1-224ENST00000557713 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
SCFD1-224ENST00000557713 DERL1Q9BUN8 251 aa10.24□□□□□ -0.77
SCFD1-224ENST00000557713 SCO2A0A1W2PP80 73 aa10.23□□□□□ -0.77
SCFD1-224ENST00000557713 GAGE6Q13070 117 aa10.23□□□□□ -0.77
SCFD1-224ENST00000557713 SFT2D1Q8WV19 159 aa10.23□□□□□ -0.77
SCFD1-224ENST00000557713 SSTP61278 116 aa10.22□□□□□ -0.77
SCFD1-224ENST00000557713 CLPSL2Q6UWE3 100 aa10.22□□□□□ -0.77
SCFD1-224ENST00000557713 BATF3Q9NR55 127 aa10.22□□□□□ -0.77
SCFD1-224ENST00000557713 TRBV25-1A0A075B6N4 114 aa10.21□□□□□ -0.77
SCFD1-224ENST00000557713 IQCJQ1A5X6 159 aa10.21□□□□□ -0.77
SCFD1-224ENST00000557713 TMUB2Q71RG4 321 aa10.21□□□□□ -0.77
SCFD1-224ENST00000557713 CLRN3Q8NCR9 226 aa10.21□□□□□ -0.77
SCFD1-224ENST00000557713 A0A1B0GV50 99 aa10.2□□□□□ -0.78
SCFD1-224ENST00000557713 SMIM17P0DL12 118 aa10.2□□□□□ -0.78
SCFD1-224ENST00000557713 CIRBPQ14011 172 aaKnown RBP10.2□□□□□ -0.78
SCFD1-224ENST00000557713 FAM213BQ8TBF2 198 aa10.2□□□□□ -0.78
SCFD1-224ENST00000557713 IGHV1-24A0A0C4DH33 117 aa10.19□□□□□ -0.78
SCFD1-224ENST00000557713 UMAD1C9J7I0 102 aa10.19□□□□□ -0.78
SCFD1-224ENST00000557713 M0QY20 66 aa10.19□□□□□ -0.78
SCFD1-224ENST00000557713 PFDN1O60925 122 aa10.19□□□□□ -0.78
SCFD1-224ENST00000557713 MT1HL1P0DM35 61 aa10.19□□□□□ -0.78
SCFD1-224ENST00000557713 CNBPP62633 177 aaKnown RBP10.19□□□□□ -0.78
SCFD1-224ENST00000557713 REG3AQ06141 175 aa10.19□□□□□ -0.78
SCFD1-224ENST00000557713 KCNRGQ8N5I3 272 aa10.19□□□□□ -0.78
SCFD1-224ENST00000557713 AP1S3Q96PC3 154 aa10.19□□□□□ -0.78
SCFD1-224ENST00000557713 SMLR1H3BR10 107 aa10.18□□□□□ -0.78
SCFD1-224ENST00000557713 C20orf203Q8NBC4 194 aa10.18□□□□□ -0.78
SCFD1-224ENST00000557713 IGLV10-54A0A075B6I4 117 aa10.17□□□□□ -0.78
SCFD1-224ENST00000557713 IGLC6P0CF74 106 aa10.17□□□□□ -0.78
SCFD1-224ENST00000557713 RPL35P42766 123 aaKnown RBP10.17□□□□□ -0.78
SCFD1-224ENST00000557713 ZNF345Q14585 488 aa10.17□□□□□ -0.78
SCFD1-224ENST00000557713 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
SCFD1-224ENST00000557713 A0A0D9SG52 128 aa10.16□□□□□ -0.78
SCFD1-224ENST00000557713 A0A1B0GUV1 79 aa10.16□□□□□ -0.78
SCFD1-224ENST00000557713 P01737 135 aa10.16□□□□□ -0.78
SCFD1-224ENST00000557713 SLPIP03973 132 aa10.16□□□□□ -0.78
SCFD1-224ENST00000557713 H2AFB1P0C5Y9 115 aa10.16□□□□□ -0.78
SCFD1-224ENST00000557713 GZMBP10144 247 aa10.16□□□□□ -0.78
SCFD1-224ENST00000557713 SUMO4Q6EEV6 95 aa10.16□□□□□ -0.78
SCFD1-224ENST00000557713 Q6ZRU5 148 aa10.16□□□□□ -0.78
SCFD1-224ENST00000557713 IGLV4-60A0A075B6I1 120 aa10.15□□□□□ -0.78
SCFD1-224ENST00000557713 hDV102S1A0JD36 115 aa10.15□□□□□ -0.78
SCFD1-224ENST00000557713 H7C1H1 209 aa10.15□□□□□ -0.78
SCFD1-224ENST00000557713 MGPP08493 103 aa10.15□□□□□ -0.78
SCFD1-224ENST00000557713 GFRA4Q9GZZ7 299 aa10.15□□□□□ -0.78
SCFD1-224ENST00000557713 CCL20P78556 96 aa10.14□□□□□ -0.79
SCFD1-224ENST00000557713 FER1L6-AS1Q8NA97 138 aa10.14□□□□□ -0.79
SCFD1-224ENST00000557713 C11orf52Q96A22 123 aa10.14□□□□□ -0.79
SCFD1-224ENST00000557713 IGHV3-64A0A075B6Q5 118 aa10.13□□□□□ -0.79
SCFD1-224ENST00000557713 C19orf71A6NCJ1 209 aa10.13□□□□□ -0.79
SCFD1-224ENST00000557713 HMSDA8MTL9 139 aa10.13□□□□□ -0.79
SCFD1-224ENST00000557713 NKX2-5P52952 324 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-224ENST00000557713 RPS20P60866 119 aaKnown RBP10.13□□□□□ -0.79
SCFD1-224ENST00000557713 CACNG7P62955 275 aa10.13□□□□□ -0.79
SCFD1-224ENST00000557713 RNF185Q96GF1 192 aa10.13□□□□□ -0.79
SCFD1-224ENST00000557713 TMEM243Q9BU79 118 aa10.13□□□□□ -0.79
SCFD1-224ENST00000557713 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
SCFD1-224ENST00000557713 A0A087WYN8 130 aa10.12□□□□□ -0.79
SCFD1-224ENST00000557713 RAB5CP51148 216 aa10.12□□□□□ -0.79
SCFD1-224ENST00000557713 CENPWQ5EE01 88 aa10.12□□□□□ -0.79
SCFD1-224ENST00000557713 RASL11AQ6T310 242 aa10.12□□□□□ -0.79
SCFD1-224ENST00000557713 OR2D3Q8NGH3 330 aa10.12□□□□□ -0.79
SCFD1-224ENST00000557713 DPH3Q96FX2 82 aa10.12□□□□□ -0.79
SCFD1-224ENST00000557713 PGLYRP4Q96LB8 373 aa10.12□□□□□ -0.79
SCFD1-224ENST00000557713 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-224ENST00000557713 BCL2L11O43521 198 aa10.11□□□□□ -0.79
SCFD1-224ENST00000557713 CHTF8P0CG12 524 aa10.11□□□□□ -0.79
SCFD1-224ENST00000557713 RGS21Q2M5E4 152 aa10.11□□□□□ -0.79
SCFD1-224ENST00000557713 SPACA4Q8TDM5 124 aa10.11□□□□□ -0.79
SCFD1-224ENST00000557713 MANBALQ9NQG1 85 aa10.11□□□□□ -0.79
SCFD1-224ENST00000557713 NIT2Q9NQR4 276 aa10.11□□□□□ -0.79
SCFD1-224ENST00000557713 AP5S1Q9NUS5 200 aa10.11□□□□□ -0.79
SCFD1-224ENST00000557713 F2Z2F3 143 aa10.1□□□□□ -0.79
SCFD1-224ENST00000557713 PLAC8Q9NZF1 115 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms