RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 S100A8P05109 93 aa10.56□□□□□ -0.72
NEDD1-213ENST00000557644 RASL11AQ6T310 242 aa10.56□□□□□ -0.72
NEDD1-213ENST00000557644 CBLN2Q8IUK8 224 aa10.56□□□□□ -0.72
NEDD1-213ENST00000557644 RPL39LQ96EH5 51 aaKnown RBP10.56□□□□□ -0.72
NEDD1-213ENST00000557644 TRBV7-3A0A075B6L6 115 aa10.55□□□□□ -0.72
NEDD1-213ENST00000557644 TRAV9-1A0A075B6T8 112 aa10.55□□□□□ -0.72
NEDD1-213ENST00000557644 TGIF2-C20orf24A0A0A6YYL0 155 aa10.55□□□□□ -0.72
NEDD1-213ENST00000557644 NCR2O95944 276 aa10.55□□□□□ -0.72
NEDD1-213ENST00000557644 ELOBQ15370 118 aa10.55□□□□□ -0.72
NEDD1-213ENST00000557644 MRPL51Q4U2R6 128 aaKnown RBP10.55□□□□□ -0.72
NEDD1-213ENST00000557644 H7C1H1 209 aa10.55□□□□□ -0.72
NEDD1-213ENST00000557644 RPL36AP83881 106 aaKnown RBP10.55□□□□□ -0.72
NEDD1-213ENST00000557644 RPL36ALQ969Q0 106 aaKnown RBP10.55□□□□□ -0.72
NEDD1-213ENST00000557644 DNAH1Q9P2D7 4330 aa10.55□□□□□ -0.72
NEDD1-213ENST00000557644 VPS13DQ5THJ4 4388 aa10.55□□□□□ -0.72
NEDD1-213ENST00000557644 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
NEDD1-213ENST00000557644 LYPD5Q6UWN5 251 aa10.54□□□□□ -0.72
NEDD1-213ENST00000557644 ATP6V0E2Q8NHE4 81 aa10.54□□□□□ -0.72
NEDD1-213ENST00000557644 LINC00588Q9Y4M8 146 aa10.54□□□□□ -0.72
NEDD1-213ENST00000557644 UBE2D3P61077 147 aa10.54□□□□□ -0.72
NEDD1-213ENST00000557644 UBE2D2P62837 147 aa10.54□□□□□ -0.72
NEDD1-213ENST00000557644 ALMS1Q8TCU4 4167 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 KMT2AQ03164 3969 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 IGHV3-38A0A0C4DH36 116 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 ATP6V1G1O75348 118 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 LY6G6CO95867 125 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 TMEM136Q6ZRR5 245 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 LINC00476Q8WZB0 136 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 NIT2Q9NQR4 276 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 MRAP2Q96G30 205 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 YPEL4Q96NS1 127 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 TNFRSF18Q9Y5U5 241 aa10.53□□□□□ -0.72
NEDD1-213ENST00000557644 SACSQ9NZJ4 4579 aa10.52□□□□□ -0.72
NEDD1-213ENST00000557644 CCL18P55774 89 aa10.52□□□□□ -0.73
NEDD1-213ENST00000557644 DEFB104AQ8WTQ1 72 aa10.52□□□□□ -0.73
NEDD1-213ENST00000557644 SCO1O75880 301 aa10.52□□□□□ -0.73
NEDD1-213ENST00000557644 LGALS9CQ6DKI2 356 aa10.52□□□□□ -0.73
NEDD1-213ENST00000557644 SH2D6Q7Z4S9 175 aa10.52□□□□□ -0.73
NEDD1-213ENST00000557644 UBE2DNLQ8IWF7 75 aa10.52□□□□□ -0.73
NEDD1-213ENST00000557644 SMCO4Q9NRQ5 59 aa10.52□□□□□ -0.73
NEDD1-213ENST00000557644 D6R8Y8 96 aa10.51□□□□□ -0.73
NEDD1-213ENST00000557644 GTSF1LQ9H1H1 148 aa10.51□□□□□ -0.73
NEDD1-213ENST00000557644 CKS2P33552 79 aa10.51□□□□□ -0.73
NEDD1-213ENST00000557644 OR10J3Q5JRS4 329 aa10.51□□□□□ -0.73
NEDD1-213ENST00000557644 NRACQ8N912 160 aa10.51□□□□□ -0.73
NEDD1-213ENST00000557644 DNAJC30Q96LL9 226 aa10.51□□□□□ -0.73
NEDD1-213ENST00000557644 TRBV24-1A0A075B6N3 115 aa10.5□□□□□ -0.73
NEDD1-213ENST00000557644 FRZBQ92765 325 aa10.5□□□□□ -0.73
NEDD1-213ENST00000557644 GNB1LQ9BYB4 327 aa10.49□□□□□ -0.73
NEDD1-213ENST00000557644 HYDINQ4G0P3 5121 aa10.49□□□□□ -0.73
NEDD1-213ENST00000557644 KIAA1644Q3SXP7 199 aa10.48□□□□□ -0.73
NEDD1-213ENST00000557644 SDHAF1A6NFY7 115 aa10.48□□□□□ -0.73
NEDD1-213ENST00000557644 DAZ4Q86SG3 579 aaKnown RBP10.48□□□□□ -0.73
NEDD1-213ENST00000557644 DAZ3Q9NR90 486 aaKnown RBP10.48□□□□□ -0.73
NEDD1-213ENST00000557644 MRPS16Q9Y3D3 137 aaKnown RBP10.48□□□□□ -0.73
NEDD1-213ENST00000557644 TRBV6-5A0A0K0K1A5 114 aa10.47□□□□□ -0.73
NEDD1-213ENST00000557644 LCE6AA0A183 80 aa10.47□□□□□ -0.73
NEDD1-213ENST00000557644 HLA-DQA1P01909 254 aa10.47□□□□□ -0.73
NEDD1-213ENST00000557644 ORMDL3Q8N138 153 aa10.47□□□□□ -0.73
NEDD1-213ENST00000557644 NPYP01303 97 aa10.47□□□□□ -0.73
NEDD1-213ENST00000557644 APCSP02743 223 aa10.47□□□□□ -0.73
NEDD1-213ENST00000557644 NTM-AS1Q6ZSK4 140 aa10.47□□□□□ -0.73
NEDD1-213ENST00000557644 ST20Q9HBF5 79 aa10.47□□□□□ -0.73
NEDD1-213ENST00000557644 TNFRSF6BO95407 300 aa10.46□□□□□ -0.73
NEDD1-213ENST00000557644 TIRAPP58753 221 aa10.46□□□□□ -0.73
NEDD1-213ENST00000557644 WFDC10BQ8IUB3 73 aa10.46□□□□□ -0.73
NEDD1-213ENST00000557644 TMEM70Q9BUB7 260 aa10.46□□□□□ -0.73
NEDD1-213ENST00000557644 PPBPP02775 128 aa10.46□□□□□ -0.74
NEDD1-213ENST00000557644 LELP1Q5T871 98 aa10.46□□□□□ -0.74
NEDD1-213ENST00000557644 PRELID3AQ96N28 172 aa10.46□□□□□ -0.74
NEDD1-213ENST00000557644 MRPL18Q9H0U6 180 aaKnown RBP10.46□□□□□ -0.74
NEDD1-213ENST00000557644 S100A1P23297 94 aa10.45□□□□□ -0.74
NEDD1-213ENST00000557644 SUMO2P61956 95 aaKnown RBP10.45□□□□□ -0.74
NEDD1-213ENST00000557644 UPK3BQ9BT76 320 aa10.45□□□□□ -0.74
NEDD1-213ENST00000557644 IGLV2-18A0A075B6J9 118 aa10.45□□□□□ -0.74
NEDD1-213ENST00000557644 POLR2KP53803 58 aaKnown RBP10.45□□□□□ -0.74
NEDD1-213ENST00000557644 COX19Q49B96 90 aa10.45□□□□□ -0.74
NEDD1-213ENST00000557644 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.45□□□□□ -0.74
NEDD1-213ENST00000557644 TRBV6-8A0A0A6YYG3 113 aa10.44□□□□□ -0.74
NEDD1-213ENST00000557644 PPP1R17O96001 155 aa10.44□□□□□ -0.74
NEDD1-213ENST00000557644 FABP9Q0Z7S8 132 aa10.44□□□□□ -0.74
NEDD1-213ENST00000557644 Q9H8V8 135 aa10.44□□□□□ -0.74
NEDD1-213ENST00000557644 MT-ND6P03923 174 aa10.44□□□□□ -0.74
NEDD1-213ENST00000557644 TRAPPC1Q9Y5R8 145 aa10.44□□□□□ -0.74
NEDD1-213ENST00000557644 TRBV27A0A0K0K1C4 114 aa10.43□□□□□ -0.74
NEDD1-213ENST00000557644 COLCA2A8K830 154 aa10.43□□□□□ -0.74
NEDD1-213ENST00000557644 PMCHP20382 165 aa10.43□□□□□ -0.74
NEDD1-213ENST00000557644 Q8N3U1 123 aa10.43□□□□□ -0.74
NEDD1-213ENST00000557644 C20orf78Q9BR46 151 aa10.43□□□□□ -0.74
NEDD1-213ENST00000557644 TRAV8-6A0A0B4J262 113 aa10.42□□□□□ -0.74
NEDD1-213ENST00000557644 I3L3M4 83 aa10.42□□□□□ -0.74
NEDD1-213ENST00000557644 COTL1Q14019 142 aa10.42□□□□□ -0.74
NEDD1-213ENST00000557644 LOC389332A0A1B0GUA5 103 aa10.41□□□□□ -0.74
NEDD1-213ENST00000557644 SIVA1O15304 175 aa10.41□□□□□ -0.74
NEDD1-213ENST00000557644 RYR2Q92736 4967 aa10.41□□□□□ -0.74
NEDD1-213ENST00000557644 PHOX2AO14813 284 aa10.41□□□□□ -0.74
NEDD1-213ENST00000557644 TSHBP01222 138 aa10.41□□□□□ -0.74
NEDD1-213ENST00000557644 M0R2N4 97 aa10.4□□□□□ -0.74
NEDD1-213ENST00000557644 VCYO14598 125 aa10.4□□□□□ -0.74
NEDD1-213ENST00000557644 ALKBH7Q9BT30 221 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms