RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 TRBV6-4A0A1B0GX49 114 aa14.56□□□□□ -0.08
FOXA1-205ENST00000557418 SMIM17P0DL12 118 aa14.56□□□□□ -0.08
FOXA1-205ENST00000557418 SLAQ13239 276 aa14.56□□□□□ -0.08
FOXA1-205ENST00000557418 SLC25A29Q8N8R3 303 aa14.56□□□□□ -0.08
FOXA1-205ENST00000557418 PAX4O43316 350 aa14.55□□□□□ -0.08
FOXA1-205ENST00000557418 RAB4BP61018 213 aa14.55□□□□□ -0.08
FOXA1-205ENST00000557418 ELOBQ15370 118 aa14.55□□□□□ -0.08
FOXA1-205ENST00000557418 SMIM15Q7Z3B0 74 aa14.55□□□□□ -0.08
FOXA1-205ENST00000557418 RNF185Q96GF1 192 aa14.55□□□□□ -0.08
FOXA1-205ENST00000557418 A0A096LPF7 62 aa14.54□□□□□ -0.08
FOXA1-205ENST00000557418 MGPP08493 103 aa14.54□□□□□ -0.08
FOXA1-205ENST00000557418 S100A1P23297 94 aa14.54□□□□□ -0.08
FOXA1-205ENST00000557418 CBLN2Q8IUK8 224 aa14.54□□□□□ -0.08
FOXA1-205ENST00000557418 S100A8P05109 93 aa14.53□□□□□ -0.08
FOXA1-205ENST00000557418 ZNF56Q15929 161 aa14.53□□□□□ -0.08
FOXA1-205ENST00000557418 SUMO4Q6EEV6 95 aa14.53□□□□□ -0.08
FOXA1-205ENST00000557418 AMN1Q8IY45 258 aa14.53□□□□□ -0.08
FOXA1-205ENST00000557418 C6orf223Q8N319 242 aa14.53□□□□□ -0.08
FOXA1-205ENST00000557418 Q9UF83 564 aa14.53□□□□□ -0.08
FOXA1-205ENST00000557418 TGIF2-C20orf24A0A0A6YYL0 155 aa14.52□□□□□ -0.09
FOXA1-205ENST00000557418 K7EQD1 137 aa14.52□□□□□ -0.09
FOXA1-205ENST00000557418 RAB4AP20338 218 aa14.52□□□□□ -0.09
FOXA1-205ENST00000557418 FAM104BQ5XKR9 115 aa14.52□□□□□ -0.09
FOXA1-205ENST00000557418 RASL11AQ6T310 242 aa14.52□□□□□ -0.09
FOXA1-205ENST00000557418 UPK3BQ9BT76 320 aa14.52□□□□□ -0.09
FOXA1-205ENST00000557418 SMCO4Q9NRQ5 59 aa14.52□□□□□ -0.09
FOXA1-205ENST00000557418 MRPS16Q9Y3D3 137 aaKnown RBP14.52□□□□□ -0.09
FOXA1-205ENST00000557418 TRBV24-1A0A075B6N3 115 aa14.51□□□□□ -0.09
FOXA1-205ENST00000557418 LOC100131303A0A0U1RQF7 123 aa14.51□□□□□ -0.09
FOXA1-205ENST00000557418 F5H697 171 aa14.51□□□□□ -0.09
FOXA1-205ENST00000557418 M0QY20 66 aa14.51□□□□□ -0.09
FOXA1-205ENST00000557418 RHOHQ15669 191 aa14.51□□□□□ -0.09
FOXA1-205ENST00000557418 ICOSQ9Y6W8 199 aa14.51□□□□□ -0.09
FOXA1-205ENST00000557418 TMEM136Q6ZRR5 245 aa14.5□□□□□ -0.09
FOXA1-205ENST00000557418 PKD1P98161 4303 aa14.5□□□□□ -0.09
FOXA1-205ENST00000557418 SCO1O75880 301 aa14.49□□□□□ -0.09
FOXA1-205ENST00000557418 TTC32Q5I0X7 151 aa14.49□□□□□ -0.09
FOXA1-205ENST00000557418 PRADC1Q9BSG0 188 aa14.49□□□□□ -0.09
FOXA1-205ENST00000557418 TRAV26-2A0A0B4J265 109 aa14.48□□□□□ -0.09
FOXA1-205ENST00000557418 LINC00694P0DN24 101 aa14.48□□□□□ -0.09
FOXA1-205ENST00000557418 GYPEP15421 78 aa14.48□□□□□ -0.09
FOXA1-205ENST00000557418 MRPL23Q16540 153 aaKnown RBP14.48□□□□□ -0.09
FOXA1-205ENST00000557418 MRPL51Q4U2R6 128 aaKnown RBP14.48□□□□□ -0.09
FOXA1-205ENST00000557418 FRZBQ92765 325 aa14.48□□□□□ -0.09
FOXA1-205ENST00000557418 TRBV10-1A0A0K0K1A3 114 aa14.47□□□□□ -0.09
FOXA1-205ENST00000557418 GAS8-AS1O95177 125 aa14.47□□□□□ -0.09
FOXA1-205ENST00000557418 TNP2Q05952 138 aa14.47□□□□□ -0.09
FOXA1-205ENST00000557418 NEXN-AS1Q8NBZ9 246 aa14.46□□□□□ -0.09
FOXA1-205ENST00000557418 MRAP2Q96G30 205 aa14.46□□□□□ -0.09
FOXA1-205ENST00000557418 GNB1LQ9BYB4 327 aa14.46□□□□□ -0.09
FOXA1-205ENST00000557418 DNAH11Q96DT5 4516 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 GAGE12JA6NER3 117 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 SMKR1H3BMG3 65 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 H7C1H1 209 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 GAGE1Q13065 139 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 GAGE4Q13068 117 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 GAGE5Q13069 117 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 COX19Q49B96 90 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 GAGE13Q4V321 117 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 LYPD5Q6UWN5 251 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 NEGR1Q7Z3B1 354 aa14.44□□□□□ -0.1
FOXA1-205ENST00000557418 DYNC1H1Q14204 4646 aaKnown RBP14.43□□□□□ -0.1
FOXA1-205ENST00000557418 PKHD1P08F94 4074 aa14.43□□□□□ -0.1
FOXA1-205ENST00000557418 SIVA1O15304 175 aa14.43□□□□□ -0.1
FOXA1-205ENST00000557418 HLA-DQA1P01909 254 aa14.43□□□□□ -0.1
FOXA1-205ENST00000557418 RPL39LQ96EH5 51 aaKnown RBP14.43□□□□□ -0.1
FOXA1-205ENST00000557418 KRTAP1-5Q9BYS1 174 aa14.43□□□□□ -0.1
FOXA1-205ENST00000557418 NIT2Q9NQR4 276 aa14.43□□□□□ -0.1
FOXA1-205ENST00000557418 NCR2O95944 276 aa14.42□□□□□ -0.1
FOXA1-205ENST00000557418 RPS10P46783 165 aaKnown RBP14.42□□□□□ -0.1
FOXA1-205ENST00000557418 NRACQ8N912 160 aa14.42□□□□□ -0.1
FOXA1-205ENST00000557418 DNAJC30Q96LL9 226 aa14.42□□□□□ -0.1
FOXA1-205ENST00000557418 TRBV7-3A0A075B6L6 115 aa14.41□□□□□ -0.1
FOXA1-205ENST00000557418 COLCA2A8K830 154 aa14.41□□□□□ -0.1
FOXA1-205ENST00000557418 BTF3P20290 206 aaKnown RBP14.41□□□□□ -0.1
FOXA1-205ENST00000557418 SRIP30626 198 aa14.41□□□□□ -0.1
FOXA1-205ENST00000557418 UBE2D3P61077 147 aa14.41□□□□□ -0.1
FOXA1-205ENST00000557418 UBE2D2P62837 147 aa14.41□□□□□ -0.1
FOXA1-205ENST00000557418 RPL36AP83881 106 aaKnown RBP14.41□□□□□ -0.1
FOXA1-205ENST00000557418 RPL36ALQ969Q0 106 aaKnown RBP14.41□□□□□ -0.1
FOXA1-205ENST00000557418 HERC2O95714 4834 aa14.41□□□□□ -0.1
FOXA1-205ENST00000557418 KIAA1109Q2LD37 5005 aa14.41□□□□□ -0.1
FOXA1-205ENST00000557418 D6R8Y8 96 aa14.4□□□□□ -0.1
FOXA1-205ENST00000557418 MT-ND6P03923 174 aa14.4□□□□□ -0.1
FOXA1-205ENST00000557418 TRBV6-5A0A0K0K1A5 114 aa14.39□□□□□ -0.11
FOXA1-205ENST00000557418 CKS2P33552 79 aa14.39□□□□□ -0.11
FOXA1-205ENST00000557418 OR10J3Q5JRS4 329 aa14.39□□□□□ -0.11
FOXA1-205ENST00000557418 APCSP02743 223 aa14.38□□□□□ -0.11
FOXA1-205ENST00000557418 PPBPP02775 128 aa14.38□□□□□ -0.11
FOXA1-205ENST00000557418 SH2D6Q7Z4S9 175 aa14.38□□□□□ -0.11
FOXA1-205ENST00000557418 ATP6V0E2Q8NHE4 81 aa14.38□□□□□ -0.11
FOXA1-205ENST00000557418 MRPL18Q9H0U6 180 aaKnown RBP14.38□□□□□ -0.11
FOXA1-205ENST00000557418 TNFRSF18Q9Y5U5 241 aa14.38□□□□□ -0.11
FOXA1-205ENST00000557418 ORMDL3Q8N138 153 aa14.37□□□□□ -0.11
FOXA1-205ENST00000557418 NPYP01303 97 aa14.36□□□□□ -0.11
FOXA1-205ENST00000557418 KIAA1644Q3SXP7 199 aa14.36□□□□□ -0.11
FOXA1-205ENST00000557418 TRAPPC1Q9Y5R8 145 aa14.36□□□□□ -0.11
FOXA1-205ENST00000557418 TRAV9-2A0A087WT02 112 aa14.35□□□□□ -0.11
FOXA1-205ENST00000557418 TNFRSF6BO95407 300 aa14.35□□□□□ -0.11
FOXA1-205ENST00000557418 PPP1R17O96001 155 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms