RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ZFP2Q6ZN57 461 aa3.43□□□□□ -1.86
ATXN3-245ENST00000556958 TMEM252Q8N6L7 170 aa3.43□□□□□ -1.86
ATXN3-245ENST00000556958 OR5C1Q8NGR4 320 aa3.43□□□□□ -1.86
ATXN3-245ENST00000556958 OR2G3Q8NGZ4 309 aa3.43□□□□□ -1.86
ATXN3-245ENST00000556958 PPP1R1CQ8WVI7 109 aa3.43□□□□□ -1.86
ATXN3-245ENST00000556958 KCNS1Q96KK3 526 aa3.43□□□□□ -1.86
ATXN3-245ENST00000556958 UQCC1Q9NVA1 299 aa3.43□□□□□ -1.86
ATXN3-245ENST00000556958 NAGKQ9UJ70 344 aa3.43□□□□□ -1.86
ATXN3-245ENST00000556958 TRBV19A0A075B6N1 114 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 PRSS46E5RG02 174 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 MPC2O95563 127 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 PET100P0DJ07 73 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 RPL12P30050 165 aaKnown RBP3.42□□□□□ -1.86
ATXN3-245ENST00000556958 H2BFSP57053 126 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 PDE6HQ13956 83 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 KRTAP26-1Q6PEX3 210 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 OR10G7Q8NGN6 311 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 OR2T35Q8NGX2 323 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 PTH2Q96A98 100 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 MGST2Q99735 147 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 GGACTQ9BVM4 153 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 SAMD10Q9BYL1 202 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 LYRM2Q9NU23 88 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-245ENST00000556958 PRR34Q9NV39 138 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 MED9Q9NWA0 146 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 CARHSP1Q9Y2V2 147 aaKnown RBP3.42□□□□□ -1.86
ATXN3-245ENST00000556958 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
ATXN3-245ENST00000556958 IGKV2-40A0A087WW87 121 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-245ENST00000556958 FXYD6-FXYD2A0A087WZ82 144 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 TRAV8-4A0A0B4J246 113 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 FNDC10F2Z333 226 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 C17orf112F2Z3M2 114 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 H0Y9J4 135 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 IGKV2D-40P01614 121 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-245ENST00000556958 P01737 135 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 NKX2-5P52952 324 aaPredicted RBP3.41□□□□□ -1.86
ATXN3-245ENST00000556958 RAB14P61106 215 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 IL15RAQ13261 267 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 C1orf137Q5JT78 98 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 CLLU1Q5K131 121 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 OR1L4Q8NGR5 311 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 SUN5Q8TC36 379 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 MBD2Q9UBB5 411 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 LENEPQ9Y5L5 61 aa3.41□□□□□ -1.86
ATXN3-245ENST00000556958 IGLV7-46A0A075B6I9 117 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 A0A096LNI7 61 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 TRBV6-8A0A0A6YYG3 113 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 TRAV21A0A0B4J279 112 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 A0A1W2PPV4 95 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 A8MWV9 139 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 SMLR1H3BR10 107 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 CSN1S1P47710 185 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 MPV17L2Q567V2 206 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 TEX261Q6UWH6 196 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 LINC00269Q8N2A0 174 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 C9orf62Q8N4C0 152 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-245ENST00000556958 PFDN5Q99471 154 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 CHCHD5Q9BSY4 110 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 C11orf1Q9H5F2 150 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 WDR83OSQ9Y284 106 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 HSPB11Q9Y547 144 aa3.4□□□□□ -1.87
ATXN3-245ENST00000556958 RBAKDNA6NC62 111 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 PGPEP1LA6NFU8 196 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 HMSDA8MTL9 139 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 HMGB3O15347 200 aaKnown RBP3.39□□□□□ -1.87
ATXN3-245ENST00000556958 OR7C2O60412 319 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 EIF3GO75821 320 aaKnown RBP eCLIP3.39□□□□□ -1.87
ATXN3-245ENST00000556958 NDUFB4O95168 129 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 IGLV7-43P04211 117 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 TYMSP04818 313 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 GIPP09681 153 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-245ENST00000556958 RPL29P47914 159 aaKnown RBP3.39□□□□□ -1.87
ATXN3-245ENST00000556958 RAB2AP61019 212 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 EIF5AP63241 154 aaKnown RBP3.39□□□□□ -1.87
ATXN3-245ENST00000556958 RPL36AP83881 106 aaKnown RBP3.39□□□□□ -1.87
ATXN3-245ENST00000556958 TWIST1Q15672 202 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 ASB16-AS1Q495Z4 193 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 Q5BKY6 102 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 GCSAMLQ5JQS6 135 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 ZNF506Q5JVG8 444 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 MIR17HGQ75NE6 70 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 EXOC3-AS1Q8N2X6 119 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 NPCDR1Q9BY65 106 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 WDR61Q9GZS3 305 aaKnown RBP3.39□□□□□ -1.87
ATXN3-245ENST00000556958 PARLQ9H300 379 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 WFDC1Q9HC57 220 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 TMEM14CQ9P0S9 112 aa3.39□□□□□ -1.87
ATXN3-245ENST00000556958 BORCS7-ASMTA0A0B4J1R7 106 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 KRBOX1C9JBD0 128 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 ARPC5O15511 151 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 IGKV2-30P06310 120 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 KRTAP1-4P0C5Y4 121 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 PYYP10082 97 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 SEC61BP60468 96 aaKnown RBP3.38□□□□□ -1.87
ATXN3-245ENST00000556958 RANP62826 216 aaKnown RBP3.38□□□□□ -1.87
ATXN3-245ENST00000556958 CLPSL2Q6UWE3 100 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms