RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ZNF345Q14585 488 aa12.22□□□□□ -0.45
CDKN3-209ENST00000556102 MIAQ16674 131 aa12.22□□□□□ -0.45
CDKN3-209ENST00000556102 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
CDKN3-209ENST00000556102 KCNRGQ8N5I3 272 aa12.22□□□□□ -0.45
CDKN3-209ENST00000556102 MUC21A0A0G2JKD1 596 aa12.21□□□□□ -0.45
CDKN3-209ENST00000556102 MUC21A0A140T8X8 626 aa12.21□□□□□ -0.45
CDKN3-209ENST00000556102 A0A1B0GV50 99 aa12.21□□□□□ -0.45
CDKN3-209ENST00000556102 F5H697 171 aa12.21□□□□□ -0.45
CDKN3-209ENST00000556102 SMLR1H3BR10 107 aa12.21□□□□□ -0.45
CDKN3-209ENST00000556102 VAX2Q9UIW0 290 aa12.21□□□□□ -0.45
CDKN3-209ENST00000556102 USP17L23D6RBM5 183 aa12.2□□□□□ -0.46
CDKN3-209ENST00000556102 HLA-DQA1P01909 254 aa12.2□□□□□ -0.46
CDKN3-209ENST00000556102 PKHD1L1Q86WI1 4243 aa12.19□□□□□ -0.46
CDKN3-209ENST00000556102 RGS21Q2M5E4 152 aa12.19□□□□□ -0.46
CDKN3-209ENST00000556102 NTM-AS1Q6ZSK4 140 aa12.19□□□□□ -0.46
CDKN3-209ENST00000556102 AP1S3Q96PC3 154 aa12.19□□□□□ -0.46
CDKN3-209ENST00000556102 KIF25-AS1Q9Y6Z4 181 aa12.19□□□□□ -0.46
CDKN3-209ENST00000556102 OXTP01178 125 aa12.18□□□□□ -0.46
CDKN3-209ENST00000556102 SMIM17P0DL12 118 aa12.18□□□□□ -0.46
CDKN3-209ENST00000556102 TMUB2Q71RG4 321 aa12.18□□□□□ -0.46
CDKN3-209ENST00000556102 PRR34Q9NV39 138 aa12.18□□□□□ -0.46
CDKN3-209ENST00000556102 PRSS1P07477 247 aa12.17□□□□□ -0.46
CDKN3-209ENST00000556102 SSTP61278 116 aa12.17□□□□□ -0.46
CDKN3-209ENST00000556102 RBX1P62877 108 aa12.17□□□□□ -0.46
CDKN3-209ENST00000556102 DGAT2L7PQ6IED9 249 aa12.17□□□□□ -0.46
CDKN3-209ENST00000556102 DERL1Q9BUN8 251 aa12.17□□□□□ -0.46
CDKN3-209ENST00000556102 TRBV25-1A0A075B6N4 114 aa12.16□□□□□ -0.46
CDKN3-209ENST00000556102 H2AFB1P0C5Y9 115 aa12.16□□□□□ -0.46
CDKN3-209ENST00000556102 RPL35P42766 123 aaKnown RBP12.16□□□□□ -0.46
CDKN3-209ENST00000556102 GAGE6Q13070 117 aa12.16□□□□□ -0.46
CDKN3-209ENST00000556102 SERTAD4-AS1Q5TG53 156 aa12.16□□□□□ -0.46
CDKN3-209ENST00000556102 HMCN2Q8NDA2 5059 aa12.16□□□□□ -0.46
CDKN3-209ENST00000556102 A0A0D9SG52 128 aa12.15□□□□□ -0.46
CDKN3-209ENST00000556102 HMSDA8MTL9 139 aa12.15□□□□□ -0.46
CDKN3-209ENST00000556102 BCL2L11O43521 198 aa12.15□□□□□ -0.46
CDKN3-209ENST00000556102 KRTAP26-1Q6PEX3 210 aa12.15□□□□□ -0.46
CDKN3-209ENST00000556102 CLPSL2Q6UWE3 100 aa12.15□□□□□ -0.46
CDKN3-209ENST00000556102 LINC00269Q8N2A0 174 aa12.15□□□□□ -0.46
CDKN3-209ENST00000556102 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.46
CDKN3-209ENST00000556102 KANTRA0A1W2PQU2 76 aa12.14□□□□□ -0.47
CDKN3-209ENST00000556102 RPL37AP61513 92 aaKnown RBP12.14□□□□□ -0.47
CDKN3-209ENST00000556102 IQCJQ1A5X6 159 aa12.14□□□□□ -0.47
CDKN3-209ENST00000556102 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
CDKN3-209ENST00000556102 EIF5AP63241 154 aaKnown RBP12.13□□□□□ -0.47
CDKN3-209ENST00000556102 C11orf52Q96A22 123 aa12.13□□□□□ -0.47
CDKN3-209ENST00000556102 H7C1H1 209 aa12.12□□□□□ -0.47
CDKN3-209ENST00000556102 M0QY20 66 aa12.12□□□□□ -0.47
CDKN3-209ENST00000556102 MGPP08493 103 aa12.12□□□□□ -0.47
CDKN3-209ENST00000556102 IGLC6P0CF74 106 aa12.12□□□□□ -0.47
CDKN3-209ENST00000556102 FER1L6-AS1Q8NA97 138 aa12.12□□□□□ -0.47
CDKN3-209ENST00000556102 MANBALQ9NQG1 85 aa12.12□□□□□ -0.47
CDKN3-209ENST00000556102 GZMBP10144 247 aa12.11□□□□□ -0.47
CDKN3-209ENST00000556102 RPS20P60866 119 aaKnown RBP12.11□□□□□ -0.47
CDKN3-209ENST00000556102 CENPWQ5EE01 88 aa12.11□□□□□ -0.47
CDKN3-209ENST00000556102 TPPP3Q9BW30 176 aa12.11□□□□□ -0.47
CDKN3-209ENST00000556102 REG3AQ06141 175 aa12.1□□□□□ -0.47
CDKN3-209ENST00000556102 SUMO4Q6EEV6 95 aa12.1□□□□□ -0.47
CDKN3-209ENST00000556102 CLRN3Q8NCR9 226 aa12.1□□□□□ -0.47
CDKN3-209ENST00000556102 OR2D3Q8NGH3 330 aa12.1□□□□□ -0.47
CDKN3-209ENST00000556102 DAZAP1Q96EP5 407 aaKnown RBP12.1□□□□□ -0.47
CDKN3-209ENST00000556102 GNG13Q9P2W3 67 aa12.1□□□□□ -0.47
CDKN3-209ENST00000556102 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.1□□□□□ -0.47
CDKN3-209ENST00000556102 CACNG7P62955 275 aa12.09□□□□□ -0.47
CDKN3-209ENST00000556102 CCL20P78556 96 aa12.09□□□□□ -0.47
CDKN3-209ENST00000556102 IGLV10-54A0A075B6I4 117 aa12.08□□□□□ -0.48
CDKN3-209ENST00000556102 TRAV1-1A0A0B4J248 108 aa12.08□□□□□ -0.48
CDKN3-209ENST00000556102 C19orf71A6NCJ1 209 aa12.08□□□□□ -0.48
CDKN3-209ENST00000556102 SDIM1Q6ZPB5 146 aa12.08□□□□□ -0.48
CDKN3-209ENST00000556102 C20orf203Q8NBC4 194 aa12.08□□□□□ -0.48
CDKN3-209ENST00000556102 TRAV8-4A0A0B4J246 113 aa12.07□□□□□ -0.48
CDKN3-209ENST00000556102 A0A1B0GUV1 79 aa12.07□□□□□ -0.48
CDKN3-209ENST00000556102 PANO1I0J062 215 aa12.07□□□□□ -0.48
CDKN3-209ENST00000556102 P01737 135 aa12.07□□□□□ -0.48
CDKN3-209ENST00000556102 HNRNPA3P51991 378 aaKnown RBP12.07□□□□□ -0.48
CDKN3-209ENST00000556102 NKX2-5P52952 324 aaPredicted RBP12.07□□□□□ -0.48
CDKN3-209ENST00000556102 CNBPP62633 177 aaKnown RBP12.07□□□□□ -0.48
CDKN3-209ENST00000556102 RASL11AQ6T310 242 aa12.07□□□□□ -0.48
CDKN3-209ENST00000556102 SMIM12Q96EX1 92 aa12.07□□□□□ -0.48
CDKN3-209ENST00000556102 TMEM243Q9BU79 118 aa12.07□□□□□ -0.48
CDKN3-209ENST00000556102 XKRY2A2RUG3 117 aa12.06□□□□□ -0.48
CDKN3-209ENST00000556102 F2Z2F3 143 aa12.06□□□□□ -0.48
CDKN3-209ENST00000556102 TRGC1P0CF51 173 aa12.06□□□□□ -0.48
CDKN3-209ENST00000556102 IGLV4-60A0A075B6I1 120 aa12.05□□□□□ -0.48
CDKN3-209ENST00000556102 hDV102S1A0JD36 115 aa12.05□□□□□ -0.48
CDKN3-209ENST00000556102 RAB19A4D1S5 217 aa12.05□□□□□ -0.48
CDKN3-209ENST00000556102 GNG4P50150 75 aa12.05□□□□□ -0.48
CDKN3-209ENST00000556102 RAB5CP51148 216 aa12.05□□□□□ -0.48
CDKN3-209ENST00000556102 PGLYRP4Q96LB8 373 aa12.05□□□□□ -0.48
CDKN3-209ENST00000556102 TEX46H3BTG2 121 aa12.04□□□□□ -0.48
CDKN3-209ENST00000556102 CIRBPQ14011 172 aaKnown RBP12.04□□□□□ -0.48
CDKN3-209ENST00000556102 GFRA4Q9GZZ7 299 aa12.04□□□□□ -0.48
CDKN3-209ENST00000556102 DPH3P1Q9H4G8 78 aa12.04□□□□□ -0.48
CDKN3-209ENST00000556102 NIT2Q9NQR4 276 aa12.04□□□□□ -0.48
CDKN3-209ENST00000556102 IFNA1P01562 189 aa12.03□□□□□ -0.48
CDKN3-209ENST00000556102 LYZL1Q6UWQ5 148 aa12.03□□□□□ -0.48
CDKN3-209ENST00000556102 AP5S1Q9NUS5 200 aa12.03□□□□□ -0.48
CDKN3-209ENST00000556102 PLA2G2DQ9UNK4 145 aa12.03□□□□□ -0.48
CDKN3-209ENST00000556102 UBE2L6O14933 153 aa12.02□□□□□ -0.49
CDKN3-209ENST00000556102 PDE6DO43924 150 aa12.02□□□□□ -0.49
CDKN3-209ENST00000556102 NTF3P20783 257 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms