RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 CRYGDP07320 174 aa6.24□□□□□ -1.41
SYNE2-220ENST00000555612 C14orf177Q52M58 125 aa6.24□□□□□ -1.41
SYNE2-220ENST00000555612 FAM167A-AS1Q96KT0 104 aa6.24□□□□□ -1.41
SYNE2-220ENST00000555612 TNCP24821 2201 aa6.24□□□□□ -1.41
SYNE2-220ENST00000555612 HIVEP3Q5T1R4 2406 aa6.24□□□□□ -1.41
SYNE2-220ENST00000555612 IGLV2-14P01704 120 aa6.23□□□□□ -1.41
SYNE2-220ENST00000555612 FUSP35637 526 aaKnown RBP eCLIP6.23□□□□□ -1.41
SYNE2-220ENST00000555612 DAND5Q8N907 189 aa6.23□□□□□ -1.41
SYNE2-220ENST00000555612 ZNF747Q9BV97 191 aa6.23□□□□□ -1.41
SYNE2-220ENST00000555612 IGLC2P0DOY2 106 aa6.23□□□□□ -1.41
SYNE2-220ENST00000555612 IGLC3P0DOY3 106 aa6.23□□□□□ -1.41
SYNE2-220ENST00000555612 TP53TG3Q9ULZ0 132 aa6.23□□□□□ -1.41
SYNE2-220ENST00000555612 IGLV2-18A0A075B6J9 118 aa6.23□□□□□ -1.41
SYNE2-220ENST00000555612 M0R2N4 97 aa6.23□□□□□ -1.41
SYNE2-220ENST00000555612 LINC01006Q8NI28 216 aa6.23□□□□□ -1.41
SYNE2-220ENST00000555612 LGALS9O00182 355 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 LYRM9A8MSI8 78 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 LY6G6CO95867 125 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 GTSF1LQ9H1H1 148 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 TMEM131Q92545 1883 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 ZNF106Q9H2Y7 1883 aaKnown RBP6.22□□□□□ -1.41
SYNE2-220ENST00000555612 RS1O15537 224 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 NAV2Q8IVL1 2488 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 CCDC168Q8NDH2 2452 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 PRSS47A8MTI9 375 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 UBE2V1Q13404 147 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 LINC00269Q8N2A0 174 aa6.22□□□□□ -1.41
SYNE2-220ENST00000555612 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.21□□□□□ -1.41
SYNE2-220ENST00000555612 SMIM9A6NGZ8 99 aa6.21□□□□□ -1.41
SYNE2-220ENST00000555612 CFC1BP0CG36 223 aa6.21□□□□□ -1.41
SYNE2-220ENST00000555612 CFC1P0CG37 223 aa6.21□□□□□ -1.41
SYNE2-220ENST00000555612 P0DMU3 169 aa6.21□□□□□ -1.41
SYNE2-220ENST00000555612 FAM231AP0DMU4 169 aa6.21□□□□□ -1.41
SYNE2-220ENST00000555612 FAM231CP0DMU5 169 aa6.21□□□□□ -1.41
SYNE2-220ENST00000555612 MAJINQ3KP22 176 aa6.21□□□□□ -1.41
SYNE2-220ENST00000555612 KRTAP10-9P60411 292 aa6.21□□□□□ -1.42
SYNE2-220ENST00000555612 TRACP01848 142 aa6.21□□□□□ -1.42
SYNE2-220ENST00000555612 CXCL5P42830 114 aa6.21□□□□□ -1.42
SYNE2-220ENST00000555612 YPEL4Q96NS1 127 aa6.21□□□□□ -1.42
SYNE2-220ENST00000555612 NDUFB1O75438 58 aa6.21□□□□□ -1.42
SYNE2-220ENST00000555612 BAALC-AS2P0C853 105 aa6.21□□□□□ -1.42
SYNE2-220ENST00000555612 MED14OSP0DP75 135 aa6.21□□□□□ -1.42
SYNE2-220ENST00000555612 CDSNQ15517 529 aa6.21□□□□□ -1.42
SYNE2-220ENST00000555612 CEMP1Q6PRD7 247 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-220ENST00000555612 OPRPNQ99935 248 aaPredicted RBP6.21□□□□□ -1.42
SYNE2-220ENST00000555612 B9D2Q9BPU9 175 aa6.21□□□□□ -1.42
SYNE2-220ENST00000555612 ZNF702PQ9H963 129 aa6.21□□□□□ -1.42
SYNE2-220ENST00000555612 C9orf118A6NHY6 69 aa6.2□□□□□ -1.42
SYNE2-220ENST00000555612 PCP2Q8IVA1 136 aa6.2□□□□□ -1.42
SYNE2-220ENST00000555612 K7EQG2 157 aa6.2□□□□□ -1.42
SYNE2-220ENST00000555612 REG3AQ06141 175 aa6.2□□□□□ -1.42
SYNE2-220ENST00000555612 CRIP3Q6Q6R5 217 aa6.2□□□□□ -1.42
SYNE2-220ENST00000555612 TRBV6-1A0A0K0K1D8 114 aa6.2□□□□□ -1.42
SYNE2-220ENST00000555612 WNK1Q9H4A3 2382 aa6.2□□□□□ -1.42
SYNE2-220ENST00000555612 TRBV10-1A0A0K0K1A3 114 aa6.2□□□□□ -1.42
SYNE2-220ENST00000555612 P0C879 139 aa6.2□□□□□ -1.42
SYNE2-220ENST00000555612 MUSTN1Q8IVN3 82 aa6.2□□□□□ -1.42
SYNE2-220ENST00000555612 IGF2RP11717 2491 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 TRAV10A0A0B4J240 114 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 MIFP14174 115 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 HIGD2AQ9BW72 106 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 OXLD1Q5BKU9 147 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 NACAE9PAV3 2078 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 A0A087WZ39 114 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 C12orf74Q32Q52 190 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 C18orf65Q6ZTR6 163 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 PPDPFLQ8WWR9 84 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 MYO18BQ8IUG5 2567 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 IGKV1D-37A0A075B6S9 117 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 IFITM1P13164 125 aa6.19□□□□□ -1.42
SYNE2-220ENST00000555612 PLXNB3Q9ULL4 1909 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 C1orf229Q6ZS94 237 aaPredicted RBP6.18□□□□□ -1.42
SYNE2-220ENST00000555612 WFDC10AQ9H1F0 79 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 DIRC1Q969H9 104 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 PSMG3-AS1Q96PY0 264 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 BAALCQ8WXS3 180 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 LINC00574Q9H8X3 128 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 KMT2EQ8IZD2 1858 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 H3BMG7 143 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 Q6ZUT4 128 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 LINC00173Q6ZV60 143 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 NTN5Q8WTR8 489 aaPredicted RBP6.18□□□□□ -1.42
SYNE2-220ENST00000555612 A0A096LNI7 61 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 C5orf47Q569G3 176 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 MIR7-3HGQ8N6C7 128 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 C20orf173Q96LM9 149 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 ABCA2Q9BZC7 2435 aa6.18□□□□□ -1.42
SYNE2-220ENST00000555612 FSTL3O95633 263 aa6.17□□□□□ -1.42
SYNE2-220ENST00000555612 CTRLP40313 264 aa6.17□□□□□ -1.42
SYNE2-220ENST00000555612 TOMM6Q96B49 74 aa6.17□□□□□ -1.42
SYNE2-220ENST00000555612 C20orf203Q8NBC4 194 aa6.17□□□□□ -1.42
SYNE2-220ENST00000555612 ZNF80P51504 273 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-220ENST00000555612 CHCHD10Q8WYQ3 142 aaPredicted RBP6.17□□□□□ -1.42
SYNE2-220ENST00000555612 H0YGX0 51 aa6.17□□□□□ -1.42
SYNE2-220ENST00000555612 LECT2O14960 151 aa6.17□□□□□ -1.42
SYNE2-220ENST00000555612 A4D1N5 150 aa6.16□□□□□ -1.42
SYNE2-220ENST00000555612 LY6LH3BQJ8 138 aa6.16□□□□□ -1.42
SYNE2-220ENST00000555612 ZFAND2AQ8N6M9 145 aa6.16□□□□□ -1.42
SYNE2-220ENST00000555612 A0A1W2PPM0 123 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms