RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 DNAJC30Q96LL9 226 aa9.15□□□□□ -0.94
SNX6-203ENST00000555416 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
SNX6-203ENST00000555416 RYR1P21817 5038 aa9.14□□□□□ -0.95
SNX6-203ENST00000555416 A0A087WWC5 75 aa9.14□□□□□ -0.95
SNX6-203ENST00000555416 XKRY2A2RUG3 117 aa9.14□□□□□ -0.95
SNX6-203ENST00000555416 F2Z2F3 143 aa9.14□□□□□ -0.95
SNX6-203ENST00000555416 M0QY20 66 aa9.14□□□□□ -0.95
SNX6-203ENST00000555416 CACNG7P62955 275 aa9.14□□□□□ -0.95
SNX6-203ENST00000555416 SUMO4Q6EEV6 95 aa9.14□□□□□ -0.95
SNX6-203ENST00000555416 NIT1Q86X76 327 aa9.14□□□□□ -0.95
SNX6-203ENST00000555416 SMIM7Q9BQ49 75 aa9.14□□□□□ -0.95
SNX6-203ENST00000555416 SMIM17P0DL12 118 aa9.13□□□□□ -0.95
SNX6-203ENST00000555416 ERVFC1-1P60608 527 aa9.13□□□□□ -0.95
SNX6-203ENST00000555416 NTM-AS1Q6ZSK4 140 aa9.13□□□□□ -0.95
SNX6-203ENST00000555416 LINC01551Q86U37 167 aa9.13□□□□□ -0.95
SNX6-203ENST00000555416 CNFNQ9BYD5 112 aa9.13□□□□□ -0.95
SNX6-203ENST00000555416 LRCOL1A6NCL2 159 aa9.12□□□□□ -0.95
SNX6-203ENST00000555416 GATCO43716 136 aaKnown RBP9.12□□□□□ -0.95
SNX6-203ENST00000555416 NDUFS6O75380 124 aaKnown RBP9.12□□□□□ -0.95
SNX6-203ENST00000555416 FOXA3P55318 350 aaPredicted RBP9.12□□□□□ -0.95
SNX6-203ENST00000555416 FAM231DQ6ZW35 169 aa9.12□□□□□ -0.95
SNX6-203ENST00000555416 DNAH5Q8TE73 4624 aa9.12□□□□□ -0.95
SNX6-203ENST00000555416 TRBV6-8A0A0A6YYG3 113 aa9.11□□□□□ -0.95
SNX6-203ENST00000555416 ZNF727A8MUV8 499 aa9.11□□□□□ -0.95
SNX6-203ENST00000555416 WFDC2Q14508 124 aa9.11□□□□□ -0.95
SNX6-203ENST00000555416 TWIST1Q15672 202 aa9.11□□□□□ -0.95
SNX6-203ENST00000555416 WDR73Q6P4I2 378 aa9.11□□□□□ -0.95
SNX6-203ENST00000555416 TRGC1P0CF51 173 aa9.1□□□□□ -0.95
SNX6-203ENST00000555416 LAGE3Q14657 143 aa9.1□□□□□ -0.95
SNX6-203ENST00000555416 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
SNX6-203ENST00000555416 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
SNX6-203ENST00000555416 PGLYRP4Q96LB8 373 aa9.1□□□□□ -0.95
SNX6-203ENST00000555416 DPH3P1Q9H4G8 78 aa9.1□□□□□ -0.95
SNX6-203ENST00000555416 TRAV26-2A0A0B4J265 109 aa9.09□□□□□ -0.95
SNX6-203ENST00000555416 KRTAP4-5Q9BYR2 181 aa9.09□□□□□ -0.95
SNX6-203ENST00000555416 KLK12Q9UKR0 248 aa9.09□□□□□ -0.95
SNX6-203ENST00000555416 HSPG2P98160 4391 aa9.08□□□□□ -0.96
SNX6-203ENST00000555416 A8MWL6 223 aa9.08□□□□□ -0.96
SNX6-203ENST00000555416 PSCAO43653 123 aa9.08□□□□□ -0.96
SNX6-203ENST00000555416 MPV17L2Q567V2 206 aa9.08□□□□□ -0.96
SNX6-203ENST00000555416 RASL11AQ6T310 242 aa9.08□□□□□ -0.96
SNX6-203ENST00000555416 GATD1Q8NB37 220 aa9.08□□□□□ -0.96
SNX6-203ENST00000555416 PGPEP1Q9NXJ5 209 aa9.08□□□□□ -0.96
SNX6-203ENST00000555416 RPL23P62829 140 aaKnown RBP9.07□□□□□ -0.96
SNX6-203ENST00000555416 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
SNX6-203ENST00000555416 CT83Q5H943 113 aa9.07□□□□□ -0.96
SNX6-203ENST00000555416 ISOC2Q96AB3 205 aa9.07□□□□□ -0.96
SNX6-203ENST00000555416 OSTCQ9NRP0 149 aa9.07□□□□□ -0.96
SNX6-203ENST00000555416 URGCP-MRPS24S4R325 110 aa9.07□□□□□ -0.96
SNX6-203ENST00000555416 V9GYV3 84 aa9.07□□□□□ -0.96
SNX6-203ENST00000555416 APOBP04114 4563 aaKnown RBP9.07□□□□□ -0.96
SNX6-203ENST00000555416 A0A087WX48 190 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 TMEM262E9PQX1 116 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 EREGO14944 169 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 LECT2O14960 151 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 CDK2AP2O75956 126 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 KRTAP10-1P60331 282 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 TMEM241Q24JQ0 296 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 Q8N976 141 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 TSKUQ8WUA8 353 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 NIT2Q9NQR4 276 aa9.06□□□□□ -0.96
SNX6-203ENST00000555416 TRAV8-3A0A0A6YYJ7 113 aa9.05□□□□□ -0.96
SNX6-203ENST00000555416 HIGD1CA8MV81 97 aa9.05□□□□□ -0.96
SNX6-203ENST00000555416 H7C1H1 209 aa9.05□□□□□ -0.96
SNX6-203ENST00000555416 GAS8-AS1O95177 125 aa9.05□□□□□ -0.96
SNX6-203ENST00000555416 GAGE6Q13070 117 aa9.05□□□□□ -0.96
SNX6-203ENST00000555416 ATRAIDQ6UW56 229 aa9.05□□□□□ -0.96
SNX6-203ENST00000555416 ENHOQ6UWT2 76 aa9.05□□□□□ -0.96
SNX6-203ENST00000555416 C15orf54Q8N8G6 183 aa9.05□□□□□ -0.96
SNX6-203ENST00000555416 RPL39LQ96EH5 51 aaKnown RBP9.05□□□□□ -0.96
SNX6-203ENST00000555416 CHCHD7Q9BUK0 85 aa9.05□□□□□ -0.96
SNX6-203ENST00000555416 PCLOQ9Y6V0 5065 aa9.05□□□□□ -0.96
SNX6-203ENST00000555416 PEA15Q15121 130 aa9.04□□□□□ -0.96
SNX6-203ENST00000555416 ADIRFQ15847 76 aa9.04□□□□□ -0.96
SNX6-203ENST00000555416 IQCJQ1A5X6 159 aa9.04□□□□□ -0.96
SNX6-203ENST00000555416 FAM74A3Q4VXF1 159 aa9.04□□□□□ -0.96
SNX6-203ENST00000555416 CDPF1Q6NVV7 123 aa9.04□□□□□ -0.96
SNX6-203ENST00000555416 Q8N814 137 aa9.04□□□□□ -0.96
SNX6-203ENST00000555416 BAALCQ8WXS3 180 aa9.04□□□□□ -0.96
SNX6-203ENST00000555416 TM2D2Q9BX73 214 aa9.04□□□□□ -0.96
SNX6-203ENST00000555416 IGKV2D-24A0A075B6R9 120 aa9.03□□□□□ -0.96
SNX6-203ENST00000555416 RBX1P62877 108 aa9.03□□□□□ -0.96
SNX6-203ENST00000555416 GFRA4Q9GZZ7 299 aa9.03□□□□□ -0.96
SNX6-203ENST00000555416 NAT8Q9UHE5 227 aa9.03□□□□□ -0.96
SNX6-203ENST00000555416 TRBV25-1A0A075B6N4 114 aa9.02□□□□□ -0.97
SNX6-203ENST00000555416 IGHV1-24A0A0C4DH33 117 aa9.02□□□□□ -0.97
SNX6-203ENST00000555416 A0A1B0GUT8 65 aa9.02□□□□□ -0.97
SNX6-203ENST00000555416 ANGP03950 147 aaKnown RBP9.02□□□□□ -0.97
SNX6-203ENST00000555416 TMEM97Q5BJF2 176 aa9.02□□□□□ -0.97
SNX6-203ENST00000555416 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.02□□□□□ -0.97
SNX6-203ENST00000555416 NUP35Q8NFH5 326 aa9.02□□□□□ -0.97
SNX6-203ENST00000555416 RNF185Q96GF1 192 aa9.02□□□□□ -0.97
SNX6-203ENST00000555416 XGP55808 180 aa9.01□□□□□ -0.97
SNX6-203ENST00000555416 ELOBQ15370 118 aa9.01□□□□□ -0.97
SNX6-203ENST00000555416 CLPSL2Q6UWE3 100 aa9.01□□□□□ -0.97
SNX6-203ENST00000555416 ABCA13Q86UQ4 5058 aa9□□□□□ -0.97
SNX6-203ENST00000555416 IGLV4-60A0A075B6I1 120 aa9□□□□□ -0.97
SNX6-203ENST00000555416 IGLV5-52A0A0A0MRZ9 124 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms