RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 BLMP54132 1417 aaPredicted RBP2.53□□□□□ -2
FCF1-207ENST00000554973 CASKIN1Q8WXD9 1431 aa2.53□□□□□ -2
FCF1-207ENST00000554973 NBDYA0A0U1RRE5 68 aa2.53□□□□□ -2
FCF1-207ENST00000554973 RBAKDNA6NC62 111 aa2.53□□□□□ -2
FCF1-207ENST00000554973 HCG22E2RYF7 251 aa2.53□□□□□ -2
FCF1-207ENST00000554973 SIX6O95475 246 aa2.53□□□□□ -2
FCF1-207ENST00000554973 XAF1Q6GPH4 301 aa2.53□□□□□ -2
FCF1-207ENST00000554973 RAPGEF2Q9Y4G8 1499 aa2.52□□□□□ -2.01
FCF1-207ENST00000554973 PLXNA1Q9UIW2 1896 aa2.52□□□□□ -2.01
FCF1-207ENST00000554973 MED12Q93074 2177 aa2.52□□□□□ -2.01
FCF1-207ENST00000554973 ABCA3Q99758 1704 aa2.52□□□□□ -2.01
FCF1-207ENST00000554973 NRXN2Q9P2S2 1712 aa2.52□□□□□ -2.01
FCF1-207ENST00000554973 IGKV2-29A2NJV5 120 aaPredicted RBP2.52□□□□□ -2.01
FCF1-207ENST00000554973 FXYD4P59646 89 aa2.52□□□□□ -2.01
FCF1-207ENST00000554973 FXYD3Q14802 87 aa2.52□□□□□ -2.01
FCF1-207ENST00000554973 CACNA1BQ00975 2339 aa2.52□□□□□ -2.01
FCF1-207ENST00000554973 TEX14Q8IWB6 1497 aa2.52□□□□□ -2.01
FCF1-207ENST00000554973 CYP4F30PQ9H0H9 118 aa2.51□□□□□ -2.01
FCF1-207ENST00000554973 AP4S1Q9Y587 144 aa2.51□□□□□ -2.01
FCF1-207ENST00000554973 ASCC3Q8N3C0 2202 aaKnown RBP2.51□□□□□ -2.01
FCF1-207ENST00000554973 PARP14Q460N5 1801 aa2.51□□□□□ -2.01
FCF1-207ENST00000554973 FYCO1Q9BQS8 1478 aa2.51□□□□□ -2.01
FCF1-207ENST00000554973 SCAPERQ9BY12 1400 aa2.51□□□□□ -2.01
FCF1-207ENST00000554973 E9PCH4 1651 aa2.5□□□□□ -2.01
FCF1-207ENST00000554973 MED13Q9UHV7 2174 aa2.5□□□□□ -2.01
FCF1-207ENST00000554973 SPTBP11277 2137 aa2.5□□□□□ -2.01
FCF1-207ENST00000554973 AFDNP55196 1824 aaKnown RBP2.5□□□□□ -2.01
FCF1-207ENST00000554973 TOPAZ1Q8N9V7 1692 aa2.5□□□□□ -2.01
FCF1-207ENST00000554973 PHIPQ8WWQ0 1821 aa2.49□□□□□ -2.01
FCF1-207ENST00000554973 PEAK1Q9H792 1746 aa2.49□□□□□ -2.01
FCF1-207ENST00000554973 PVALEFA0A1B0GWK0 134 aa2.49□□□□□ -2.01
FCF1-207ENST00000554973 C5orf56Q8N8D9 126 aa2.49□□□□□ -2.01
FCF1-207ENST00000554973 DPY30Q9C005 99 aa2.49□□□□□ -2.01
FCF1-207ENST00000554973 ADGRL2O95490 1459 aa2.49□□□□□ -2.01
FCF1-207ENST00000554973 NSD3Q9BZ95 1437 aa2.49□□□□□ -2.01
FCF1-207ENST00000554973 GAPVD1Q14C86 1478 aa2.48□□□□□ -2.01
FCF1-207ENST00000554973 DOCK2Q92608 1830 aa2.48□□□□□ -2.01
FCF1-207ENST00000554973 LINC00032P0C843 101 aa2.48□□□□□ -2.01
FCF1-207ENST00000554973 CCL3L1P16619 93 aa2.48□□□□□ -2.01
FCF1-207ENST00000554973 MYOZ3Q8TDC0 251 aa2.48□□□□□ -2.01
FCF1-207ENST00000554973 PPP1R1CQ8WVI7 109 aa2.48□□□□□ -2.01
FCF1-207ENST00000554973 PPIP5K1Q6PFW1 1433 aa2.48□□□□□ -2.01
FCF1-207ENST00000554973 DLG5Q8TDM6 1919 aa2.48□□□□□ -2.01
FCF1-207ENST00000554973 HIVEP2P31629 2446 aa2.47□□□□□ -2.01
FCF1-207ENST00000554973 TRBV7-1A0A0A6YYK4 115 aa2.47□□□□□ -2.01
FCF1-207ENST00000554973 SNCAP37840 140 aa2.47□□□□□ -2.01
FCF1-207ENST00000554973 C20orf197Q8N268 126 aa2.47□□□□□ -2.01
FCF1-207ENST00000554973 LINC00312Q9Y6C7 94 aa2.47□□□□□ -2.01
FCF1-207ENST00000554973 TCHHQ07283 1943 aa2.46□□□□□ -2.02
FCF1-207ENST00000554973 PXDNQ92626 1479 aa2.46□□□□□ -2.02
FCF1-207ENST00000554973 ABCC5O15440 1437 aa2.46□□□□□ -2.02
FCF1-207ENST00000554973 UBA52P62987 128 aaKnown RBP2.46□□□□□ -2.02
FCF1-207ENST00000554973 SSBP1Q04837 148 aaKnown RBP2.46□□□□□ -2.02
FCF1-207ENST00000554973 TECTAO75443 2155 aa2.46□□□□□ -2.02
FCF1-207ENST00000554973 CLPSL1A2RUU4 121 aa2.45□□□□□ -2.02
FCF1-207ENST00000554973 MT-ATP8P03928 68 aa2.45□□□□□ -2.02
FCF1-207ENST00000554973 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
FCF1-207ENST00000554973 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
FCF1-207ENST00000554973 Q6ZQY7 126 aa2.45□□□□□ -2.02
FCF1-207ENST00000554973 DEFB119Q8N690 84 aa2.45□□□□□ -2.02
FCF1-207ENST00000554973 BET1LQ9NYM9 111 aa2.45□□□□□ -2.02
FCF1-207ENST00000554973 LINC00474Q9P2X8 69 aa2.45□□□□□ -2.02
FCF1-207ENST00000554973 LRRC37A3O60309 1634 aa2.45□□□□□ -2.02
FCF1-207ENST00000554973 TET3O43151 1660 aa2.44□□□□□ -2.02
FCF1-207ENST00000554973 ZNF56Q15929 161 aa2.44□□□□□ -2.02
FCF1-207ENST00000554973 COX7B2Q8TF08 81 aa2.44□□□□□ -2.02
FCF1-207ENST00000554973 CHD1O14646 1710 aa2.44□□□□□ -2.02
FCF1-207ENST00000554973 MAGI1Q96QZ7 1491 aaPredicted RBP2.44□□□□□ -2.02
FCF1-207ENST00000554973 J3QKU1 62 aa2.43□□□□□ -2.02
FCF1-207ENST00000554973 CAV3P56539 151 aa2.43□□□□□ -2.02
FCF1-207ENST00000554973 GNG11P61952 73 aa2.43□□□□□ -2.02
FCF1-207ENST00000554973 C10orf128Q5T292 105 aa2.43□□□□□ -2.02
FCF1-207ENST00000554973 FAM74A4Q5TZK3 123 aa2.43□□□□□ -2.02
FCF1-207ENST00000554973 LINC00208Q96KT6 92 aa2.43□□□□□ -2.02
FCF1-207ENST00000554973 V9GYS6 101 aa2.43□□□□□ -2.02
FCF1-207ENST00000554973 ARFGEF1Q9Y6D6 1849 aa2.42□□□□□ -2.02
FCF1-207ENST00000554973 NAP1L6A6NFF2 107 aa2.42□□□□□ -2.02
FCF1-207ENST00000554973 KLKP1Q107X0 134 aa2.42□□□□□ -2.02
FCF1-207ENST00000554973 CCL19Q99731 98 aa2.42□□□□□ -2.02
FCF1-207ENST00000554973 VAMP8Q9BV40 100 aa2.42□□□□□ -2.02
FCF1-207ENST00000554973 Q9H521 79 aa2.42□□□□□ -2.02
FCF1-207ENST00000554973 PI4KAP42356 2102 aa2.42□□□□□ -2.02
FCF1-207ENST00000554973 KIAA1551Q9HCM1 1747 aa2.42□□□□□ -2.02
FCF1-207ENST00000554973 BAZ1AQ9NRL2 1556 aaPredicted RBP2.41□□□□□ -2.02
FCF1-207ENST00000554973 FXYD1O00168 92 aa2.41□□□□□ -2.02
FCF1-207ENST00000554973 KRTDAPP60985 99 aa2.41□□□□□ -2.02
FCF1-207ENST00000554973 KRTAP13-1Q8IUC0 172 aa2.41□□□□□ -2.02
FCF1-207ENST00000554973 TANC1Q9C0D5 1861 aa2.41□□□□□ -2.02
FCF1-207ENST00000554973 NCR3O14931 201 aa2.4□□□□□ -2.03
FCF1-207ENST00000554973 ELOF1P60002 83 aaKnown RBP2.4□□□□□ -2.03
FCF1-207ENST00000554973 LINC00575Q6W349 94 aa2.4□□□□□ -2.03
FCF1-207ENST00000554973 LAMC3Q9Y6N6 1575 aa2.4□□□□□ -2.03
FCF1-207ENST00000554973 NCOA6Q14686 2063 aaPredicted RBP2.39□□□□□ -2.03
FCF1-207ENST00000554973 TRBV7-3A0A075B6L6 115 aa2.39□□□□□ -2.03
FCF1-207ENST00000554973 GNGT2O14610 69 aa2.39□□□□□ -2.03
FCF1-207ENST00000554973 Q0VG73 95 aa2.39□□□□□ -2.03
FCF1-207ENST00000554973 TSLPQ969D9 159 aa2.39□□□□□ -2.03
FCF1-207ENST00000554973 MED13LQ71F56 2210 aa2.39□□□□□ -2.03
FCF1-207ENST00000554973 FLG2Q5D862 2391 aaPredicted RBP2.39□□□□□ -2.03
FCF1-207ENST00000554973 GOLGA3Q08378 1498 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms