RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 Q8IZM0 81 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 MMGT1Q8N4V1 131 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 SPTSSBQ8NFR3 76 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 SCN3BQ9NY72 215 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 NHSL1Q5SYE7 1610 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 ZMYM4Q5VZL5 1548 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 LAMB1P07942 1786 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 PTPN13Q12923 2485 aa-0.65□□□□□ -2.51
PCNX1-208ENST00000554707 LPAP08519 4548 aa-0.66□□□□□ -2.51
PCNX1-208ENST00000554707 FAM236AA0A1B0GUQ0 79 aa-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 FAM236BA0A1B0GV22 79 aa-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 PIN1P1O15428 100 aa-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 NBEAP1P0C6P0 100 aa-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 UBE2D1P51668 147 aa-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 Q5VSD8 79 aa-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 MRPL40Q9NQ50 206 aaKnown RBP-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 SAR1AQ9NR31 198 aa-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 SPANXCQ9NY87 97 aa-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 TNXBP22105 4242 aa-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 AKAP6Q13023 2319 aa-0.66□□□□□ -2.52
PCNX1-208ENST00000554707 SPRR1AP35321 89 aa-0.67□□□□□ -2.52
PCNX1-208ENST00000554707 S100A7L2Q5SY68 101 aa-0.67□□□□□ -2.52
PCNX1-208ENST00000554707 CFAP126Q5VTH2 177 aa-0.67□□□□□ -2.52
PCNX1-208ENST00000554707 PSMG3Q9BT73 122 aaPredicted RBP-0.67□□□□□ -2.52
PCNX1-208ENST00000554707 FAM208BQ5VWN6 2430 aa-0.67□□□□□ -2.52
PCNX1-208ENST00000554707 SRRM2Q9UQ35 2752 aaKnown RBP-0.68□□□□□ -2.52
PCNX1-208ENST00000554707 CLPSL1A2RUU4 121 aa-0.68□□□□□ -2.52
PCNX1-208ENST00000554707 APOC4-APOC2K7ER74 178 aa-0.68□□□□□ -2.52
PCNX1-208ENST00000554707 IFNA17P01571 189 aa-0.68□□□□□ -2.52
PCNX1-208ENST00000554707 IL5P05113 134 aa-0.68□□□□□ -2.52
PCNX1-208ENST00000554707 IGLC6P0CF74 106 aa-0.68□□□□□ -2.52
PCNX1-208ENST00000554707 BAGE3Q86Y29 109 aa-0.68□□□□□ -2.52
PCNX1-208ENST00000554707 MYCBP2O75592 4640 aa-0.68□□□□□ -2.52
PCNX1-208ENST00000554707 SPTBN2O15020 2390 aa-0.68□□□□□ -2.52
PCNX1-208ENST00000554707 ZNF292O60281 2723 aa-0.68□□□□□ -2.52
PCNX1-208ENST00000554707 FXYD6-FXYD2A0A087WZ82 144 aa-0.69□□□□□ -2.52
PCNX1-208ENST00000554707 HAMPP81172 84 aa-0.69□□□□□ -2.52
PCNX1-208ENST00000554707 HIST1H1AQ02539 215 aaPredicted RBP-0.69□□□□□ -2.52
PCNX1-208ENST00000554707 KRTAP20-2Q3LI61 65 aa-0.69□□□□□ -2.52
PCNX1-208ENST00000554707 SMIM3Q9BZL3 60 aa-0.69□□□□□ -2.52
PCNX1-208ENST00000554707 SPANXA1Q9NS26 97 aa-0.69□□□□□ -2.52
PCNX1-208ENST00000554707 SPCS1Q9Y6A9 102 aa-0.69□□□□□ -2.52
PCNX1-208ENST00000554707 BIVM-ERCC5R4GMW8 1640 aa-0.69□□□□□ -2.52
PCNX1-208ENST00000554707 ARAP1Q96P48 1450 aa-0.69□□□□□ -2.52
PCNX1-208ENST00000554707 ARHGEF10O15013 1369 aa-0.7□□□□□ -2.52
PCNX1-208ENST00000554707 PHIPQ8WWQ0 1821 aa-0.7□□□□□ -2.52
PCNX1-208ENST00000554707 PKD1L1Q8TDX9 2849 aa-0.7□□□□□ -2.52
PCNX1-208ENST00000554707 BCE1O60756 84 aa-0.7□□□□□ -2.52
PCNX1-208ENST00000554707 SNCGO76070 127 aa-0.7□□□□□ -2.52
PCNX1-208ENST00000554707 MORN2Q502X0 79 aa-0.7□□□□□ -2.52
PCNX1-208ENST00000554707 AIF1LQ9BQI0 150 aa-0.7□□□□□ -2.52
PCNX1-208ENST00000554707 NRXN2Q9P2S2 1712 aa-0.7□□□□□ -2.52
PCNX1-208ENST00000554707 HERC1Q15751 4861 aa-0.7□□□□□ -2.52
PCNX1-208ENST00000554707 PIPP12273 146 aaPredicted RBP-0.71□□□□□ -2.52
PCNX1-208ENST00000554707 RRAS2P62070 204 aaPredicted RBP-0.71□□□□□ -2.52
PCNX1-208ENST00000554707 LINC00312Q9Y6C7 94 aa-0.71□□□□□ -2.52
PCNX1-208ENST00000554707 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.71□□□□□ -2.52
PCNX1-208ENST00000554707 PLXNA1Q9UIW2 1896 aa-0.71□□□□□ -2.52
PCNX1-208ENST00000554707 PKDREJQ9NTG1 2253 aa-0.72□□□□□ -2.52
PCNX1-208ENST00000554707 XIRP1Q702N8 1843 aaKnown RBP-0.72□□□□□ -2.52
PCNX1-208ENST00000554707 J3QR89 54 aa-0.72□□□□□ -2.52
PCNX1-208ENST00000554707 LINC00694P0DN24 101 aa-0.72□□□□□ -2.52
PCNX1-208ENST00000554707 Q5VV11 94 aa-0.72□□□□□ -2.52
PCNX1-208ENST00000554707 FLNAP21333 2647 aaKnown RBP-0.72□□□□□ -2.53
PCNX1-208ENST00000554707 KMT2AQ03164 3969 aa-0.72□□□□□ -2.53
PCNX1-208ENST00000554707 AKAP11Q9UKA4 1901 aa-0.73□□□□□ -2.53
PCNX1-208ENST00000554707 PITX3O75364 302 aa-0.73□□□□□ -2.53
PCNX1-208ENST00000554707 CBLN1P23435 193 aa-0.73□□□□□ -2.53
PCNX1-208ENST00000554707 S100A3P33764 101 aa-0.73□□□□□ -2.53
PCNX1-208ENST00000554707 Q6ZUT4 128 aa-0.73□□□□□ -2.53
PCNX1-208ENST00000554707 TAC4Q86UU9 113 aa-0.73□□□□□ -2.53
PCNX1-208ENST00000554707 SPTSSAQ969W0 71 aa-0.73□□□□□ -2.53
PCNX1-208ENST00000554707 ZANQ9Y493 2812 aa-0.73□□□□□ -2.53
PCNX1-208ENST00000554707 ZNF609O15014 1411 aa-0.73□□□□□ -2.53
PCNX1-208ENST00000554707 K7ERU9 68 aa-0.74□□□□□ -2.53
PCNX1-208ENST00000554707 M0R2Z0 102 aa-0.74□□□□□ -2.53
PCNX1-208ENST00000554707 ZNF818PQ6ZRF7 136 aa-0.74□□□□□ -2.53
PCNX1-208ENST00000554707 SEC11CQ9BY50 192 aa-0.74□□□□□ -2.53
PCNX1-208ENST00000554707 HERC2O95714 4834 aa-0.74□□□□□ -2.53
PCNX1-208ENST00000554707 DOPEY2Q9Y3R5 2298 aa-0.75□□□□□ -2.53
PCNX1-208ENST00000554707 PPRC1Q5VV67 1664 aaKnown RBP-0.75□□□□□ -2.53
PCNX1-208ENST00000554707 MYH9P35579 1960 aaKnown RBP-0.75□□□□□ -2.53
PCNX1-208ENST00000554707 PPP1R17O96001 155 aa-0.75□□□□□ -2.53
PCNX1-208ENST00000554707 CKS1BP61024 79 aa-0.75□□□□□ -2.53
PCNX1-208ENST00000554707 DCHS2Q6V1P9 2916 aa-0.75□□□□□ -2.53
PCNX1-208ENST00000554707 K7EQZ3 153 aa-0.76□□□□□ -2.53
PCNX1-208ENST00000554707 MT4P47944 62 aa-0.76□□□□□ -2.53
PCNX1-208ENST00000554707 DCDP81605 110 aaKnown RBP-0.76□□□□□ -2.53
PCNX1-208ENST00000554707 TP53AIP1Q9HCN2 124 aa-0.76□□□□□ -2.53
PCNX1-208ENST00000554707 OVOS2A0A0J9YW53 1432 aa-0.76□□□□□ -2.53
PCNX1-208ENST00000554707 DISP2A7MBM2 1401 aa-0.76□□□□□ -2.53
PCNX1-208ENST00000554707 OVOS2Q6IE36 1432 aa-0.76□□□□□ -2.53
PCNX1-208ENST00000554707 C10orf71Q711Q0 1435 aa-0.76□□□□□ -2.53
PCNX1-208ENST00000554707 MUC22E2RYF6 1773 aaPredicted RBP-0.76□□□□□ -2.53
PCNX1-208ENST00000554707 CTXND1A0A1B0GTU2 59 aa-0.77□□□□□ -2.53
PCNX1-208ENST00000554707 NDUFB6O95139 128 aa-0.77□□□□□ -2.53
PCNX1-208ENST00000554707 GSKIPQ9P0R6 139 aa-0.77□□□□□ -2.53
PCNX1-208ENST00000554707 R4GMQ9 66 aa-0.77□□□□□ -2.53
PCNX1-208ENST00000554707 ARFGEF1Q9Y6D6 1849 aa-0.78□□□□□ -2.53
PCNX1-208ENST00000554707 RYR3Q15413 4870 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms