RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 IGHV4OR15-8A0A075B7B6 117 aa10.68□□□□□ -0.7
VTI1B-204ENST00000554659 A0A087WW49 117 aa10.68□□□□□ -0.7
VTI1B-204ENST00000554659 PROP1O75360 226 aa10.68□□□□□ -0.7
VTI1B-204ENST00000554659 SPATA25Q9BR10 227 aa10.68□□□□□ -0.7
VTI1B-204ENST00000554659 IGHV1-58A0A0C4DH39 117 aa10.67□□□□□ -0.7
VTI1B-204ENST00000554659 ZFP36P26651 326 aaKnown RBP10.67□□□□□ -0.7
VTI1B-204ENST00000554659 HIGD2BQ4VC39 106 aa10.67□□□□□ -0.7
VTI1B-204ENST00000554659 C20orf203Q8NBC4 194 aa10.67□□□□□ -0.7
VTI1B-204ENST00000554659 MLST8Q9BVC4 326 aa10.67□□□□□ -0.7
VTI1B-204ENST00000554659 SIRPDQ9H106 197 aa10.67□□□□□ -0.7
VTI1B-204ENST00000554659 ESM1Q9NQ30 184 aa10.67□□□□□ -0.7
VTI1B-204ENST00000554659 PTPRQQ9UMZ3 2332 aa10.67□□□□□ -0.7
VTI1B-204ENST00000554659 LINC00322Q6ZN03 302 aaPredicted RBP10.66□□□□□ -0.7
VTI1B-204ENST00000554659 LOXL1Q08397 574 aaPredicted RBP10.66□□□□□ -0.7
VTI1B-204ENST00000554659 GDF5OSQ5U4N7 250 aa10.66□□□□□ -0.7
VTI1B-204ENST00000554659 ZNF106Q9H2Y7 1883 aaKnown RBP10.66□□□□□ -0.7
VTI1B-204ENST00000554659 A0A1W2PNU3 283 aaPredicted RBP10.66□□□□□ -0.7
VTI1B-204ENST00000554659 ADORA2A-AS1P86434 159 aa10.66□□□□□ -0.7
VTI1B-204ENST00000554659 OBSL1O75147 1896 aa10.66□□□□□ -0.7
VTI1B-204ENST00000554659 EIF4EBP1Q13541 118 aaPredicted RBP10.66□□□□□ -0.7
VTI1B-204ENST00000554659 NDUFA11Q86Y39 141 aa10.66□□□□□ -0.7
VTI1B-204ENST00000554659 YPEL4Q96NS1 127 aa10.66□□□□□ -0.7
VTI1B-204ENST00000554659 MBD6Q96DN6 1003 aa10.65□□□□□ -0.7
VTI1B-204ENST00000554659 ATP5G1P05496 136 aa10.65□□□□□ -0.7
VTI1B-204ENST00000554659 MIR7-3HGQ8N6C7 128 aa10.65□□□□□ -0.7
VTI1B-204ENST00000554659 IGKV2D-26A0A0A0MRZ7 120 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 IGLC6P0CF74 106 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 DEFB113Q30KQ7 82 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 C9orf66Q5T8R8 295 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 ZMAT4Q9H898 229 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 ZNF80P51504 273 aaPredicted RBP10.64□□□□□ -0.71
VTI1B-204ENST00000554659 DAZAP2Q15038 168 aaPredicted RBP10.64□□□□□ -0.71
VTI1B-204ENST00000554659 RNF183Q96D59 192 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 A0A0J9YX75 114 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 NDUFA1O15239 70 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 CXCL5P42830 114 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 LINC00643Q86TS7 51 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 SPTSSBQ8NFR3 76 aa10.64□□□□□ -0.71
VTI1B-204ENST00000554659 FBXL19-AS1Q494R0 122 aa10.63□□□□□ -0.71
VTI1B-204ENST00000554659 DENND4AQ7Z401 1863 aa10.63□□□□□ -0.71
VTI1B-204ENST00000554659 TRAV23DV6A0A075B6W5 121 aa10.63□□□□□ -0.71
VTI1B-204ENST00000554659 UNQ9165/PRO28630Q6UXU0 137 aa10.63□□□□□ -0.71
VTI1B-204ENST00000554659 FAM208BQ5VWN6 2430 aa10.63□□□□□ -0.71
VTI1B-204ENST00000554659 SPART-AS1P0CW21 52 aa10.63□□□□□ -0.71
VTI1B-204ENST00000554659 DIRC1Q969H9 104 aa10.63□□□□□ -0.71
VTI1B-204ENST00000554659 KIF26AQ9ULI4 1882 aaPredicted RBP10.63□□□□□ -0.71
VTI1B-204ENST00000554659 MDFICQ9P1T7 246 aa10.62□□□□□ -0.71
VTI1B-204ENST00000554659 TMEM256-PLSCR3K7ERE1 68 aa10.62□□□□□ -0.71
VTI1B-204ENST00000554659 DEFB1P60022 68 aa10.62□□□□□ -0.71
VTI1B-204ENST00000554659 TRBV12-3P01733 135 aa10.62□□□□□ -0.71
VTI1B-204ENST00000554659 J3QKU1 62 aa10.62□□□□□ -0.71
VTI1B-204ENST00000554659 ODF3BA8MYP8 253 aa10.62□□□□□ -0.71
VTI1B-204ENST00000554659 TCL1BO95988 128 aa10.62□□□□□ -0.71
VTI1B-204ENST00000554659 CCDC140Q96MF4 163 aa10.61□□□□□ -0.71
VTI1B-204ENST00000554659 PLA2G5P39877 138 aa10.61□□□□□ -0.71
VTI1B-204ENST00000554659 UBE2AP49459 152 aa10.61□□□□□ -0.71
VTI1B-204ENST00000554659 Q6ZUT4 128 aa10.61□□□□□ -0.71
VTI1B-204ENST00000554659 SPAG11BQ08648 103 aa10.61□□□□□ -0.71
VTI1B-204ENST00000554659 MIAQ16674 131 aa10.61□□□□□ -0.71
VTI1B-204ENST00000554659 SRCAPQ6ZRS2 3230 aa10.61□□□□□ -0.71
VTI1B-204ENST00000554659 FAM110AQ9BQ89 295 aa10.61□□□□□ -0.71
VTI1B-204ENST00000554659 PKIGQ9Y2B9 76 aa10.61□□□□□ -0.71
VTI1B-204ENST00000554659 TRBV10-1A0A0K0K1A3 114 aa10.6□□□□□ -0.71
VTI1B-204ENST00000554659 C4orf3Q8WVX3 66 aa10.6□□□□□ -0.71
VTI1B-204ENST00000554659 HHLA3Q9XRX5 114 aa10.6□□□□□ -0.71
VTI1B-204ENST00000554659 A6NDX4 124 aa10.6□□□□□ -0.71
VTI1B-204ENST00000554659 CCL18P55774 89 aa10.6□□□□□ -0.71
VTI1B-204ENST00000554659 C20orf197Q8N268 126 aa10.6□□□□□ -0.71
VTI1B-204ENST00000554659 DSCAML1Q8TD84 2053 aa10.6□□□□□ -0.71
VTI1B-204ENST00000554659 ODF3Q96PU9 254 aa10.59□□□□□ -0.71
VTI1B-204ENST00000554659 H0Y9J4 135 aa10.59□□□□□ -0.71
VTI1B-204ENST00000554659 NFE4Q86UQ8 179 aa10.59□□□□□ -0.71
VTI1B-204ENST00000554659 TM2D2Q9BX73 214 aa10.59□□□□□ -0.71
VTI1B-204ENST00000554659 MT-ATP8P03928 68 aa10.59□□□□□ -0.71
VTI1B-204ENST00000554659 NDUFV3P56181 108 aaKnown RBP10.59□□□□□ -0.71
VTI1B-204ENST00000554659 C1orf229Q6ZS94 237 aaPredicted RBP10.59□□□□□ -0.71
VTI1B-204ENST00000554659 MPLKIPQ8TAP9 179 aa10.58□□□□□ -0.72
VTI1B-204ENST00000554659 UPK3BQ9BT76 320 aa10.58□□□□□ -0.72
VTI1B-204ENST00000554659 WISP2O76076 250 aa10.58□□□□□ -0.72
VTI1B-204ENST00000554659 NEXN-AS1Q8NBZ9 246 aa10.58□□□□□ -0.72
VTI1B-204ENST00000554659 TP53TG3Q9ULZ0 132 aa10.58□□□□□ -0.72
VTI1B-204ENST00000554659 TMEM263Q8WUH6 116 aaKnown RBP10.58□□□□□ -0.72
VTI1B-204ENST00000554659 PDE6GP18545 87 aa10.57□□□□□ -0.72
VTI1B-204ENST00000554659 A0A0J9YXY3 114 aa10.57□□□□□ -0.72
VTI1B-204ENST00000554659 SEC61GP60059 68 aa10.57□□□□□ -0.72
VTI1B-204ENST00000554659 KLK12Q9UKR0 248 aa10.57□□□□□ -0.72
VTI1B-204ENST00000554659 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
VTI1B-204ENST00000554659 FSTL3O95633 263 aa10.56□□□□□ -0.72
VTI1B-204ENST00000554659 BPY2O14599 106 aa10.56□□□□□ -0.72
VTI1B-204ENST00000554659 MYCNOSP40205 109 aa10.56□□□□□ -0.72
VTI1B-204ENST00000554659 KIAA1549LQ6ZVL6 1849 aa10.56□□□□□ -0.72
VTI1B-204ENST00000554659 TEX49A0A1B0GTD5 131 aa10.56□□□□□ -0.72
VTI1B-204ENST00000554659 TMEM131Q92545 1883 aa10.56□□□□□ -0.72
VTI1B-204ENST00000554659 SORL1Q92673 2214 aa10.55□□□□□ -0.72
VTI1B-204ENST00000554659 UQCRQO14949 82 aa10.55□□□□□ -0.72
VTI1B-204ENST00000554659 SDIM1Q6ZPB5 146 aa10.55□□□□□ -0.72
VTI1B-204ENST00000554659 U3KQK5 164 aa10.55□□□□□ -0.72
VTI1B-204ENST00000554659 NOTCH2Q04721 2471 aa10.55□□□□□ -0.72
VTI1B-204ENST00000554659 NCOA6Q14686 2063 aaPredicted RBP10.55□□□□□ -0.72
VTI1B-204ENST00000554659 COX7BP24311 80 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms