RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 NDUFA6P56556 154 aa7.34□□□□□ -1.23
SHMT2-215ENST00000554656 C6orf223Q8N319 242 aa7.34□□□□□ -1.23
SHMT2-215ENST00000554656 LINC00612Q8N6U2 182 aa7.34□□□□□ -1.23
SHMT2-215ENST00000554656 ALKBH7Q9BT30 221 aaPredicted RBP7.34□□□□□ -1.23
SHMT2-215ENST00000554656 NOP10Q9NPE3 64 aaKnown RBP7.34□□□□□ -1.23
SHMT2-215ENST00000554656 TIMM8BQ9Y5J9 83 aaPredicted RBP7.34□□□□□ -1.23
SHMT2-215ENST00000554656 ESDP10768 282 aa7.33□□□□□ -1.24
SHMT2-215ENST00000554656 SRIP30626 198 aa7.33□□□□□ -1.24
SHMT2-215ENST00000554656 SNRPEP62304 92 aaKnown RBP7.33□□□□□ -1.24
SHMT2-215ENST00000554656 ZNF415Q09FC8 603 aa7.33□□□□□ -1.24
SHMT2-215ENST00000554656 SYT8Q8NBV8 401 aa7.33□□□□□ -1.24
SHMT2-215ENST00000554656 TMEM263Q8WUH6 116 aaKnown RBP7.33□□□□□ -1.24
SHMT2-215ENST00000554656 AP1S3Q96PC3 154 aa7.33□□□□□ -1.24
SHMT2-215ENST00000554656 SPXQ9BT56 116 aa7.33□□□□□ -1.24
SHMT2-215ENST00000554656 LAMTOR2Q9Y2Q5 125 aa7.33□□□□□ -1.24
SHMT2-215ENST00000554656 CCL18P55774 89 aa7.32□□□□□ -1.24
SHMT2-215ENST00000554656 KIAA1644Q3SXP7 199 aa7.32□□□□□ -1.24
SHMT2-215ENST00000554656 C18orf32Q8TCD1 76 aa7.32□□□□□ -1.24
SHMT2-215ENST00000554656 DPH3P1Q9H4G8 78 aa7.32□□□□□ -1.24
SHMT2-215ENST00000554656 TRAV26-1A0A087WT03 109 aa7.31□□□□□ -1.24
SHMT2-215ENST00000554656 CDK2AP2O75956 126 aa7.31□□□□□ -1.24
SHMT2-215ENST00000554656 RAB4AP20338 218 aa7.31□□□□□ -1.24
SHMT2-215ENST00000554656 MRPL51Q4U2R6 128 aaKnown RBP7.31□□□□□ -1.24
SHMT2-215ENST00000554656 ORMDL3Q8N138 153 aa7.31□□□□□ -1.24
SHMT2-215ENST00000554656 HIST3H2BBQ8N257 126 aa7.31□□□□□ -1.24
SHMT2-215ENST00000554656 MRAP2Q96G30 205 aa7.31□□□□□ -1.24
SHMT2-215ENST00000554656 GSN-AS1Q9NRJ2 163 aa7.31□□□□□ -1.24
SHMT2-215ENST00000554656 MSRB1Q9NZV6 116 aa7.31□□□□□ -1.24
SHMT2-215ENST00000554656 APOBP04114 4563 aaKnown RBP7.3□□□□□ -1.24
SHMT2-215ENST00000554656 MUC21A0A0G2JKD1 596 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 A0A0J9YY99 117 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 MUC21A0A140T8X8 626 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 GAGE12BA1L429 117 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 M0R381 172 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 GAGE7O76087 117 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 GAGE12FP0CL80 117 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 GAGE12GP0CL81 117 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 GAGE12IP0CL82 117 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 BAGE3Q86Y29 109 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 AMN1Q8IY45 258 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 RNF185Q96GF1 192 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 PACRGQ96M98 296 aaPredicted RBP7.3□□□□□ -1.24
SHMT2-215ENST00000554656 Q9H8V8 135 aa7.3□□□□□ -1.24
SHMT2-215ENST00000554656 D6R8Y8 96 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 M0R2P5 195 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 PPP1R17O96001 155 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 EVI2AP22794 236 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 CKS2P33552 79 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 ESRGQ1W209 222 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 Q6ZTI0 123 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 MAPKAPK5-AS1Q8N8E1 139 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 C11orf72Q8NBR9 251 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 PRELID3AQ96N28 172 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 MDFICQ9P1T7 246 aa7.29□□□□□ -1.24
SHMT2-215ENST00000554656 PRSS47A8MTI9 375 aa7.28□□□□□ -1.24
SHMT2-215ENST00000554656 SMIM17P0DL12 118 aa7.28□□□□□ -1.24
SHMT2-215ENST00000554656 PMCHP20382 165 aa7.28□□□□□ -1.24
SHMT2-215ENST00000554656 S100A2P29034 98 aa7.28□□□□□ -1.24
SHMT2-215ENST00000554656 SPATA12Q7Z6I5 190 aa7.28□□□□□ -1.24
SHMT2-215ENST00000554656 TMEM18Q96B42 140 aa7.28□□□□□ -1.24
SHMT2-215ENST00000554656 CHCHD1Q96BP2 118 aaKnown RBP7.28□□□□□ -1.24
SHMT2-215ENST00000554656 UPK3BQ9BT76 320 aa7.28□□□□□ -1.24
SHMT2-215ENST00000554656 MRPS16Q9Y3D3 137 aaKnown RBP7.28□□□□□ -1.24
SHMT2-215ENST00000554656 KIF25-AS1Q9Y6Z4 181 aa7.28□□□□□ -1.24
SHMT2-215ENST00000554656 A8MWV9 139 aa7.27□□□□□ -1.25
SHMT2-215ENST00000554656 SERF1AO75920 110 aa7.27□□□□□ -1.25
SHMT2-215ENST00000554656 LINC00310P59036 64 aa7.27□□□□□ -1.25
SHMT2-215ENST00000554656 SSTP61278 116 aa7.27□□□□□ -1.25
SHMT2-215ENST00000554656 DAZ2Q13117 558 aaKnown RBP7.27□□□□□ -1.25
SHMT2-215ENST00000554656 ZNF876PQ49A33 203 aa7.27□□□□□ -1.25
SHMT2-215ENST00000554656 VSIG2Q96IQ7 327 aa7.27□□□□□ -1.25
SHMT2-215ENST00000554656 A0A096LPF7 62 aa7.26□□□□□ -1.25
SHMT2-215ENST00000554656 H3BNG1 76 aa7.26□□□□□ -1.25
SHMT2-215ENST00000554656 RHODO00212 210 aa7.26□□□□□ -1.25
SHMT2-215ENST00000554656 LINC00315P59091 139 aa7.26□□□□□ -1.25
SHMT2-215ENST00000554656 TTC32Q5I0X7 151 aa7.26□□□□□ -1.25
SHMT2-215ENST00000554656 Q6ZRN7 208 aaPredicted RBP7.26□□□□□ -1.25
SHMT2-215ENST00000554656 C14orf178Q8N769 122 aaPredicted RBP7.26□□□□□ -1.25
SHMT2-215ENST00000554656 RASL10AQ92737 203 aa7.26□□□□□ -1.25
SHMT2-215ENST00000554656 DNAH5Q8TE73 4624 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 CIDEAO60543 219 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 HSBP1O75506 76 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 TNFRSF6BO95407 300 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 LINC00614P0C842 121 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 RPL32P62910 135 aaKnown RBP7.25□□□□□ -1.25
SHMT2-215ENST00000554656 IQCJQ1A5X6 159 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 NIT1Q86X76 327 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 Q8N1X5 172 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 HIST1H2BLQ99880 126 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 C20orf78Q9BR46 151 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 MAP1LC3AQ9H492 121 aa7.25□□□□□ -1.25
SHMT2-215ENST00000554656 NXT2Q9NPJ8 142 aaKnown RBP7.25□□□□□ -1.25
SHMT2-215ENST00000554656 LINC01546A6NGU7 62 aa7.24□□□□□ -1.25
SHMT2-215ENST00000554656 IFITM10A6NMD0 228 aa7.24□□□□□ -1.25
SHMT2-215ENST00000554656 K7EMI3 77 aa7.24□□□□□ -1.25
SHMT2-215ENST00000554656 NPYP01303 97 aa7.24□□□□□ -1.25
SHMT2-215ENST00000554656 CRYGDP07320 174 aa7.24□□□□□ -1.25
SHMT2-215ENST00000554656 BTF3P20290 206 aaKnown RBP7.24□□□□□ -1.25
SHMT2-215ENST00000554656 ZFP2Q6ZN57 461 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms