RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 RPP21Q9H633 154 aaKnown RBP7.17□□□□□ -1.26
SHMT2-213ENST00000554600 DAZ3Q9NR90 486 aaKnown RBP7.17□□□□□ -1.26
SHMT2-213ENST00000554600 A0A087WX48 190 aa7.16□□□□□ -1.26
SHMT2-213ENST00000554600 TMEM262E9PQX1 116 aa7.16□□□□□ -1.26
SHMT2-213ENST00000554600 H7C1H1 209 aa7.16□□□□□ -1.26
SHMT2-213ENST00000554600 GATCO43716 136 aaKnown RBP7.16□□□□□ -1.26
SHMT2-213ENST00000554600 TWIST1Q15672 202 aa7.16□□□□□ -1.26
SHMT2-213ENST00000554600 NIT1Q86X76 327 aa7.16□□□□□ -1.26
SHMT2-213ENST00000554600 OR10G8Q8NGN5 311 aa7.16□□□□□ -1.26
SHMT2-213ENST00000554600 SMIM7Q9BQ49 75 aa7.16□□□□□ -1.26
SHMT2-213ENST00000554600 TM2D2Q9BX73 214 aa7.16□□□□□ -1.26
SHMT2-213ENST00000554600 TRAV8-3A0A0A6YYJ7 113 aa7.15□□□□□ -1.26
SHMT2-213ENST00000554600 NTF3P20783 257 aa7.15□□□□□ -1.26
SHMT2-213ENST00000554600 LAGE3Q14657 143 aa7.15□□□□□ -1.26
SHMT2-213ENST00000554600 CHCHD5Q9BSY4 110 aa7.15□□□□□ -1.26
SHMT2-213ENST00000554600 PGPEP1Q9NXJ5 209 aa7.15□□□□□ -1.26
SHMT2-213ENST00000554600 KLK12Q9UKR0 248 aa7.15□□□□□ -1.26
SHMT2-213ENST00000554600 KIF25-AS1Q9Y6Z4 181 aa7.15□□□□□ -1.26
SHMT2-213ENST00000554600 DYNC1H1Q14204 4646 aaKnown RBP7.15□□□□□ -1.27
SHMT2-213ENST00000554600 TRBV6-8A0A0A6YYG3 113 aa7.14□□□□□ -1.27
SHMT2-213ENST00000554600 ZNF727A8MUV8 499 aa7.14□□□□□ -1.27
SHMT2-213ENST00000554600 SRP19P09132 144 aaKnown RBP7.14□□□□□ -1.27
SHMT2-213ENST00000554600 CTRLP40313 264 aa7.14□□□□□ -1.27
SHMT2-213ENST00000554600 PEA15Q15121 130 aa7.14□□□□□ -1.27
SHMT2-213ENST00000554600 SUMO4Q6EEV6 95 aa7.14□□□□□ -1.27
SHMT2-213ENST00000554600 DPH3P1Q9H4G8 78 aa7.14□□□□□ -1.27
SHMT2-213ENST00000554600 A8MWL6 223 aa7.13□□□□□ -1.27
SHMT2-213ENST00000554600 RAB14P61106 215 aa7.13□□□□□ -1.27
SHMT2-213ENST00000554600 IFITM2Q01629 132 aa7.13□□□□□ -1.27
SHMT2-213ENST00000554600 ELOBQ15370 118 aa7.13□□□□□ -1.27
SHMT2-213ENST00000554600 TMEM97Q5BJF2 176 aa7.13□□□□□ -1.27
SHMT2-213ENST00000554600 CDPF1Q6NVV7 123 aa7.13□□□□□ -1.27
SHMT2-213ENST00000554600 SMIM15Q7Z3B0 74 aa7.13□□□□□ -1.27
SHMT2-213ENST00000554600 UBE2WQ96B02 151 aa7.13□□□□□ -1.27
SHMT2-213ENST00000554600 RMI2Q96E14 147 aa7.13□□□□□ -1.27
SHMT2-213ENST00000554600 IGKV2D-24A0A075B6R9 120 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 M0QY20 66 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 CDK2AP2O75956 126 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 FAM74A3Q4VXF1 159 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 WDR73Q6P4I2 378 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 RASL11AQ6T310 242 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 FAM231DQ6ZW35 169 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 BORCS7Q96B45 105 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 PGLYRP4Q96LB8 373 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 DNAJC30Q96LL9 226 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 SMDT1Q9H4I9 107 aa7.12□□□□□ -1.27
SHMT2-213ENST00000554600 TRBV25-1A0A075B6N4 114 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 IGLV5-52A0A0A0MRZ9 124 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 LECT2O14960 151 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 CRPP02741 224 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 PKIAP61925 76 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 GAGE6Q13070 117 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 LINC01551Q86U37 167 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 MAPKAPK5-AS1Q8N8E1 139 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 C15orf54Q8N8G6 183 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 GTSF1Q8WW33 167 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 CHCHD7Q9BUK0 85 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 COX11Q9Y6N1 276 aa7.11□□□□□ -1.27
SHMT2-213ENST00000554600 IGHV1-24A0A0C4DH33 117 aa7.1□□□□□ -1.27
SHMT2-213ENST00000554600 LRCOL1A6NCL2 159 aa7.1□□□□□ -1.27
SHMT2-213ENST00000554600 ANGP03950 147 aaKnown RBP7.1□□□□□ -1.27
SHMT2-213ENST00000554600 TMEM241Q24JQ0 296 aa7.1□□□□□ -1.27
SHMT2-213ENST00000554600 MPV17L2Q567V2 206 aa7.1□□□□□ -1.27
SHMT2-213ENST00000554600 NTM-AS1Q6ZSK4 140 aa7.1□□□□□ -1.27
SHMT2-213ENST00000554600 DEFB104AQ8WTQ1 72 aa7.1□□□□□ -1.27
SHMT2-213ENST00000554600 CNFNQ9BYD5 112 aa7.1□□□□□ -1.27
SHMT2-213ENST00000554600 NIT2Q9NQR4 276 aa7.1□□□□□ -1.27
SHMT2-213ENST00000554600 TRAV26-2A0A0B4J265 109 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 C9JQL5 133 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 GCSHP23434 173 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 SRSF3P84103 164 aaKnown RBP7.09□□□□□ -1.27
SHMT2-213ENST00000554600 Q0VG73 95 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 ADIRFQ15847 76 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 NDUFA5Q16718 116 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 CT83Q5H943 113 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 ATRAIDQ6UW56 229 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 Q8N814 137 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 Q8N976 141 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 NTN5Q8WTR8 489 aaPredicted RBP7.09□□□□□ -1.27
SHMT2-213ENST00000554600 BAALCQ8WXS3 180 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 OSTCQ9NRP0 149 aa7.09□□□□□ -1.27
SHMT2-213ENST00000554600 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.08□□□□□ -1.28
SHMT2-213ENST00000554600 HIGD1CA8MV81 97 aa7.08□□□□□ -1.28
SHMT2-213ENST00000554600 FOXA3P55318 350 aaPredicted RBP7.08□□□□□ -1.28
SHMT2-213ENST00000554600 KRTAP10-1P60331 282 aa7.08□□□□□ -1.28
SHMT2-213ENST00000554600 WFDC2Q14508 124 aa7.08□□□□□ -1.28
SHMT2-213ENST00000554600 CLPSL2Q6UWE3 100 aa7.08□□□□□ -1.28
SHMT2-213ENST00000554600 GATD1Q8NB37 220 aa7.08□□□□□ -1.28
SHMT2-213ENST00000554600 TMEM243Q9BU79 118 aa7.08□□□□□ -1.28
SHMT2-213ENST00000554600 C1orf43Q9BWL3 253 aa7.08□□□□□ -1.28
SHMT2-213ENST00000554600 NAT8Q9UHE5 227 aa7.08□□□□□ -1.28
SHMT2-213ENST00000554600 HSPG2P98160 4391 aa7.08□□□□□ -1.28
SHMT2-213ENST00000554600 A0A1B0GUT8 65 aa7.07□□□□□ -1.28
SHMT2-213ENST00000554600 UBE2L6O14933 153 aa7.07□□□□□ -1.28
SHMT2-213ENST00000554600 RPL23P62829 140 aaKnown RBP7.07□□□□□ -1.28
SHMT2-213ENST00000554600 RBX1P62877 108 aa7.07□□□□□ -1.28
SHMT2-213ENST00000554600 COTL1Q14019 142 aa7.07□□□□□ -1.28
SHMT2-213ENST00000554600 IQCJQ1A5X6 159 aa7.07□□□□□ -1.28
SHMT2-213ENST00000554600 TSKUQ8WUA8 353 aa7.07□□□□□ -1.28
SHMT2-213ENST00000554600 ISOC2Q96AB3 205 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms