RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 C17orf51A8MQB3 221 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 LINC01619G3V211 115 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 LY6HO94772 140 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 IGHV3-9P01782 118 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 IL4P05112 153 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 ASAH2BP0C7U1 165 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 CTLA4P16410 223 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 UBE2E1P51965 193 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 ATP5EP56381 51 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-225ENST00000554214 RPS11P62280 158 aaKnown RBP eCLIP3.19□□□□□ -1.9
ATXN3-225ENST00000554214 RPL38P63173 70 aaKnown RBP3.19□□□□□ -1.9
ATXN3-225ENST00000554214 CCL8P80075 99 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 INSL4Q14641 139 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 TMEM170BQ5T4T1 132 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 DGAT2L6Q6ZPD8 337 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 LINC00305Q7Z4B0 112 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 LINC00311Q8N616 119 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 CNEP1R1Q8N9A8 125 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 SRSF12Q8WXF0 261 aaKnown RBP3.19□□□□□ -1.9
ATXN3-225ENST00000554214 VSIG2Q96IQ7 327 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 UBE2E2Q96LR5 201 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 C18orf15Q96N68 181 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 SLC25A2Q9BXI2 301 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 OTORQ9NRC9 128 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 AMMECR1Q9Y4X0 333 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-225ENST00000554214 PRKDCP78527 4128 aaKnown RBP3.19□□□□□ -1.9
ATXN3-225ENST00000554214 MED12LQ86YW9 2145 aa3.19□□□□□ -1.9
ATXN3-225ENST00000554214 NOTCH1P46531 2555 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 KMT2CQ8NEZ4 4911 aaKnown RBP3.18□□□□□ -1.9
ATXN3-225ENST00000554214 ROS1P08922 2347 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 A0A096LNT2 108 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 TRAV8-1A0A0A6YYK1 113 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 SMKR1H3BMG3 65 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 J3QLW9 94 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 MRPS12O15235 138 aaKnown RBP3.18□□□□□ -1.9
ATXN3-225ENST00000554214 NDUFB3O43676 98 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 EFNA2O43921 213 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 PRB2P02812 416 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-225ENST00000554214 COL8A2P25067 703 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 SUB1P53999 127 aaKnown RBP eCLIP3.18□□□□□ -1.9
ATXN3-225ENST00000554214 APOC4P55056 127 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 FXYD6P3P58550 94 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 DAD1P61803 113 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 DAZ2Q13117 558 aaKnown RBP3.18□□□□□ -1.9
ATXN3-225ENST00000554214 FAM120AOSQ5T036 256 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 ZNF493Q6ZR52 646 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 DAZ4Q86SG3 579 aaKnown RBP3.18□□□□□ -1.9
ATXN3-225ENST00000554214 LINC01006Q8NI28 216 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 ZNF721Q8TF20 911 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 LRRC29Q8WV35 223 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 ZC2HC1AQ96GY0 325 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 FAM19A4Q96LR4 140 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 IGF2BP2-AS1Q96M15 143 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 GPX7Q96SL4 187 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-225ENST00000554214 DAZ3Q9NR90 486 aaKnown RBP3.18□□□□□ -1.9
ATXN3-225ENST00000554214 PRR14LQ5THK1 2151 aa3.18□□□□□ -1.9
ATXN3-225ENST00000554214 MALRD1Q5VYJ5 2156 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 IGHV1-58A0A0C4DH39 117 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 WI2-2373I1.2A0A1W2PRP0 233 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 PLAC8L1A1L4L8 177 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 PGPA6NDG6 321 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 F2Z2F3 143 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 LGALS9O00182 355 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 SYNGR2O43760 224 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 NDUFS5O43920 106 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 WISP3O95389 354 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-225ENST00000554214 GCHFRP30047 84 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 SSR2P43308 183 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 C1orf140Q5VVS0 124 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 LINC00643Q86TS7 51 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 PDPNQ86YL7 162 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 LINC01561Q8N1V8 128 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 SERP2Q8N6R1 65 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 IL1F10Q8WWZ1 152 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 TRGV9Q99603 122 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 NXT2Q9NPJ8 142 aaKnown RBP3.17□□□□□ -1.9
ATXN3-225ENST00000554214 NHP2Q9NX24 153 aaKnown RBP3.17□□□□□ -1.9
ATXN3-225ENST00000554214 TIMM9Q9Y5J7 89 aa3.17□□□□□ -1.9
ATXN3-225ENST00000554214 F11RQ9Y624 299 aaKnown RBP3.17□□□□□ -1.9
ATXN3-225ENST00000554214 A0A0A6YYD4 124 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 UBE2L5PA0A1B0GUS4 154 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 TCRBV4S1A1TA0A5B7 111 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 C9JCJ5 164 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 NPYP01303 97 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
ATXN3-225ENST00000554214 COX5AP20674 150 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 PCBD1P61457 104 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 NNATQ16517 81 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 LGALS9CQ6DKI2 356 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 Q6ZQT7 251 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 ATP5L2Q7Z4Y8 100 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 FAM19A2Q8N3H0 131 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 C3orf56Q8N813 242 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 LY6G5BQ8NDX9 201 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 FAM3DQ96BQ1 224 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 ODF3Q96PU9 254 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 CHAC1Q9BUX1 264 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 DPH3P1Q9H4G8 78 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 EPDR1Q9UM22 224 aa3.16□□□□□ -1.9
ATXN3-225ENST00000554214 ALPK2Q86TB3 2170 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms