RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 GAGE4Q13068 117 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 GAGE5Q13069 117 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 GAGE13Q4V321 117 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 OR10J3Q5JRS4 329 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 LINC00528Q8N1L1 170 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 Q8N814 137 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.87□□□□□ -1.15
SRP54-203ENST00000553544 FER1L6-AS1Q8NA97 138 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 SSBP4Q9BWG4 385 aaPredicted RBP7.87□□□□□ -1.15
SRP54-203ENST00000553544 PLA2G2DQ9UNK4 145 aa7.87□□□□□ -1.15
SRP54-203ENST00000553544 C19orf71A6NCJ1 209 aa7.86□□□□□ -1.15
SRP54-203ENST00000553544 IGLV2-8P01709 118 aa7.86□□□□□ -1.15
SRP54-203ENST00000553544 RPL19P84098 196 aaKnown RBP7.86□□□□□ -1.15
SRP54-203ENST00000553544 FAM74A4Q5TZK3 123 aa7.86□□□□□ -1.15
SRP54-203ENST00000553544 RPP21Q9H633 154 aaKnown RBP7.86□□□□□ -1.15
SRP54-203ENST00000553544 TRBV20OR9-2A0A075B6H5 130 aa7.85□□□□□ -1.15
SRP54-203ENST00000553544 A0A087WWL8 130 aa7.85□□□□□ -1.15
SRP54-203ENST00000553544 TRBV10-1A0A0K0K1A3 114 aa7.85□□□□□ -1.15
SRP54-203ENST00000553544 OXTP01178 125 aa7.85□□□□□ -1.15
SRP54-203ENST00000553544 TRGC1P0CF51 173 aa7.85□□□□□ -1.15
SRP54-203ENST00000553544 CT83Q5H943 113 aa7.85□□□□□ -1.15
SRP54-203ENST00000553544 FAM231DQ6ZW35 169 aa7.85□□□□□ -1.15
SRP54-203ENST00000553544 C15orf54Q8N8G6 183 aa7.85□□□□□ -1.15
SRP54-203ENST00000553544 BORCS7Q96B45 105 aa7.85□□□□□ -1.15
SRP54-203ENST00000553544 TPPP3Q9BW30 176 aa7.85□□□□□ -1.15
SRP54-203ENST00000553544 A8MWL6 223 aa7.84□□□□□ -1.15
SRP54-203ENST00000553544 GATCO43716 136 aaKnown RBP7.84□□□□□ -1.15
SRP54-203ENST00000553544 SRP19P09132 144 aaKnown RBP7.84□□□□□ -1.15
SRP54-203ENST00000553544 WDR73Q6P4I2 378 aa7.84□□□□□ -1.15
SRP54-203ENST00000553544 SMIM15Q7Z3B0 74 aa7.84□□□□□ -1.15
SRP54-203ENST00000553544 OR10AG1Q8NH19 301 aa7.84□□□□□ -1.15
SRP54-203ENST00000553544 OCC1Q8TAD7 63 aa7.84□□□□□ -1.15
SRP54-203ENST00000553544 HMCN2Q8NDA2 5059 aa7.84□□□□□ -1.15
SRP54-203ENST00000553544 A0A087WWC5 75 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 H7C1H1 209 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 IGHV3-30P01768 117 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 IGHV3-33P01772 117 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 IGLC6P0CF74 106 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 IGHV3-30-3P0DP02 117 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 IGHV3-30-5P0DP03 117 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 RAB4BP61018 213 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 LAGE3Q14657 143 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 ZNF56Q15929 161 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 Q8N3U1 123 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 NUDT10Q8NFP7 164 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 NUDT11Q96G61 164 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 NAT8Q9UHE5 227 aa7.83□□□□□ -1.16
SRP54-203ENST00000553544 CTRLP40313 264 aa7.82□□□□□ -1.16
SRP54-203ENST00000553544 RPL36AP83881 106 aaKnown RBP7.82□□□□□ -1.16
SRP54-203ENST00000553544 TMEM241Q24JQ0 296 aa7.82□□□□□ -1.16
SRP54-203ENST00000553544 Q6ZSA8 131 aa7.82□□□□□ -1.16
SRP54-203ENST00000553544 LINC01551Q86U37 167 aa7.82□□□□□ -1.16
SRP54-203ENST00000553544 OR10G8Q8NGN5 311 aa7.82□□□□□ -1.16
SRP54-203ENST00000553544 RPL36ALQ969Q0 106 aaKnown RBP7.82□□□□□ -1.16
SRP54-203ENST00000553544 RNASE7Q9H1E1 156 aaKnown RBP7.82□□□□□ -1.16
SRP54-203ENST00000553544 OSTCQ9NRP0 149 aa7.82□□□□□ -1.16
SRP54-203ENST00000553544 TRBV7-3A0A075B6L6 115 aa7.81□□□□□ -1.16
SRP54-203ENST00000553544 FAM231BA6NCW3 169 aa7.81□□□□□ -1.16
SRP54-203ENST00000553544 K7EN84 100 aa7.81□□□□□ -1.16
SRP54-203ENST00000553544 UBE2D3P61077 147 aa7.81□□□□□ -1.16
SRP54-203ENST00000553544 UBE2D2P62837 147 aa7.81□□□□□ -1.16
SRP54-203ENST00000553544 TM2D2Q9BX73 214 aa7.81□□□□□ -1.16
SRP54-203ENST00000553544 CNFNQ9BYD5 112 aa7.81□□□□□ -1.16
SRP54-203ENST00000553544 GFRA4Q9GZZ7 299 aa7.81□□□□□ -1.16
SRP54-203ENST00000553544 Q9HAA7 133 aa7.81□□□□□ -1.16
SRP54-203ENST00000553544 KIF25-AS1Q9Y6Z4 181 aa7.81□□□□□ -1.16
SRP54-203ENST00000553544 F5H697 171 aa7.8□□□□□ -1.16
SRP54-203ENST00000553544 TMEM97Q5BJF2 176 aa7.8□□□□□ -1.16
SRP54-203ENST00000553544 CLLU1Q5K131 121 aa7.8□□□□□ -1.16
SRP54-203ENST00000553544 DAZ4Q86SG3 579 aaKnown RBP7.8□□□□□ -1.16
SRP54-203ENST00000553544 NIT1Q86X76 327 aa7.8□□□□□ -1.16
SRP54-203ENST00000553544 DPH3P1Q9H4G8 78 aa7.8□□□□□ -1.16
SRP54-203ENST00000553544 DAZ3Q9NR90 486 aaKnown RBP7.8□□□□□ -1.16
SRP54-203ENST00000553544 MUC21A0A0G2JKD1 596 aa7.79□□□□□ -1.16
SRP54-203ENST00000553544 MUC21A0A140T8X8 626 aa7.79□□□□□ -1.16
SRP54-203ENST00000553544 GZMBP10144 247 aa7.79□□□□□ -1.16
SRP54-203ENST00000553544 PKIAP61925 76 aa7.79□□□□□ -1.16
SRP54-203ENST00000553544 TWIST1Q15672 202 aa7.79□□□□□ -1.16
SRP54-203ENST00000553544 ADIRFQ15847 76 aa7.79□□□□□ -1.16
SRP54-203ENST00000553544 KCNIP4Q6PIL6 250 aa7.79□□□□□ -1.16
SRP54-203ENST00000553544 LYZL1Q6UWQ5 148 aa7.79□□□□□ -1.16
SRP54-203ENST00000553544 NEXN-AS1Q8NBZ9 246 aa7.79□□□□□ -1.16
SRP54-203ENST00000553544 TSKUQ8WUA8 353 aa7.79□□□□□ -1.16
SRP54-203ENST00000553544 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
SRP54-203ENST00000553544 TRAV8-3A0A0A6YYJ7 113 aa7.78□□□□□ -1.16
SRP54-203ENST00000553544 MGPP08493 103 aa7.78□□□□□ -1.16
SRP54-203ENST00000553544 PNRC1Q12796 327 aaPredicted RBP7.78□□□□□ -1.16
SRP54-203ENST00000553544 ISOC2Q96AB3 205 aa7.78□□□□□ -1.16
SRP54-203ENST00000553544 NTF3P20783 257 aa7.77□□□□□ -1.17
SRP54-203ENST00000553544 FOXA3P55318 350 aaPredicted RBP7.77□□□□□ -1.17
SRP54-203ENST00000553544 RPL23P62829 140 aaKnown RBP7.77□□□□□ -1.17
SRP54-203ENST00000553544 UQCC3Q6UW78 93 aa7.77□□□□□ -1.17
SRP54-203ENST00000553544 DNAJC30Q96LL9 226 aa7.77□□□□□ -1.17
SRP54-203ENST00000553544 CHCHD7Q9BUK0 85 aa7.77□□□□□ -1.17
SRP54-203ENST00000553544 URGCP-MRPS24S4R325 110 aa7.77□□□□□ -1.17
SRP54-203ENST00000553544 TRBV6-8A0A0A6YYG3 113 aa7.76□□□□□ -1.17
SRP54-203ENST00000553544 A0A1B0GUT8 65 aa7.76□□□□□ -1.17
SRP54-203ENST00000553544 HIGD1CA8MV81 97 aa7.76□□□□□ -1.17
SRP54-203ENST00000553544 PPP1R2P9O14990 202 aa7.76□□□□□ -1.17
SRP54-203ENST00000553544 SSTP61278 116 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms