RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 PCNX1Q96RV3 2341 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 A0A096LPI6 279 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 TRAV13-1A0A0B4J241 112 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 C5orf58C9J3I9 102 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 TPT1P13693 172 aaKnown RBP1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 RPL7P18124 248 aaKnown RBP1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 SNRPFP62306 86 aaKnown RBP1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 HRCT1Q6UXD1 115 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 PLPP5Q8NEB5 264 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 SPANXCQ9NY87 97 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 C22orf24Q9Y442 160 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 SPG11Q96JI7 2443 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 CENPEQ02224 2701 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 FRYQ5TBA9 3013 aa1.5□□□□□ -2.17
RAB3IP-217ENST00000552610 MYO7BQ6PIF6 2116 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 ASH1LQ9NR48 2969 aaKnown RBP1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 PKDREJQ9NTG1 2253 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 USP9YO00507 2555 aaPredicted RBP1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 HELZP42694 1942 aaKnown RBP1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 C9orf170A2RU37 121 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 H3BMG7 143 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 VMA21Q3ZAQ7 101 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 PYDC1Q8WXC3 89 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 PSMF1Q92530 271 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 TRAPPC2LQ9UL33 140 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 ASPMQ8IZT6 3477 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 LAMA1P25391 3075 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 ZGRF1Q86YA3 2104 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 ZZEF1O43149 2961 aa1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 TEP1Q99973 2627 aaKnown RBP1.49□□□□□ -2.17
RAB3IP-217ENST00000552610 CELSR3Q9NYQ7 3312 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 BPTFQ12830 3046 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 HIVEP3Q5T1R4 2406 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 ITPR3Q14573 2671 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 NCOA6Q14686 2063 aaPredicted RBP1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 PVALEFA0A1B0GWK0 134 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 FAM92AA1XBS5 289 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 TNFSF15O95150 251 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 TRACP01848 142 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 SAA1P0DJI8 122 aaPredicted RBP1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 MAXP61244 160 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 DIAPH2-AS1Q14236 149 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 SPRNQ5BIV9 151 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 OR5AK2Q8NH90 309 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 ANP32BQ92688 251 aaKnown RBP1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 ZC2HC1AQ96GY0 325 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 TAF9BQ9HBM6 251 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 ABCA4P78363 2273 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 MGAQ8IWI9 3026 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 CCDC168Q8NDH2 2452 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 LAMA5O15230 3695 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 SPTBP11277 2137 aa1.48□□□□□ -2.17
RAB3IP-217ENST00000552610 FREM2Q5SZK8 3169 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 PRRC2CQ9Y520 2896 aaKnown RBP1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 IGHV3-33P01772 117 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 RPS3P23396 243 aaKnown RBP eCLIP1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 KRTAP10-4P60372 401 aaPredicted RBP1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 LSM3P62310 102 aaKnown RBP1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 FOXI2Q6ZQN5 318 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 TMEM229BQ8NBD8 167 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 AKAP6Q13023 2319 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 MTORP42345 2549 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 NBEAQ8NFP9 2946 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 KIAA1549LQ6ZVL6 1849 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 MED13LQ71F56 2210 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 KALRNO60229 2985 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 ITPR1Q14643 2758 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 SETD2Q9BYW2 2564 aaPredicted RBP1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 F8P00451 2351 aa1.47□□□□□ -2.17
RAB3IP-217ENST00000552610 FLNCQ14315 2725 aa1.46□□□□□ -2.17
RAB3IP-217ENST00000552610 SMG1Q96Q15 3661 aaKnown RBP1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 TSC2P49815 1807 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 SPTY2D1-AS1A0A0U1RR47 76 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 TNFP01375 233 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 PAEPP09466 180 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 MIR22HGQ0VDD5 57 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 DEFB133Q30KQ1 61 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 LINC00269Q8N2A0 174 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 MORN4Q8NDC4 146 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 AMELYQ99218 206 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 C19orf12Q9NSK7 152 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 TEX15Q9BXT5 2789 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 ABCA2Q9BZC7 2435 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 ITPR2Q14571 2701 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 TENM1Q9UKZ4 2725 aa1.46□□□□□ -2.18
RAB3IP-217ENST00000552610 CHD3Q12873 2000 aaKnown RBP1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 ZFC3H1O60293 1989 aaKnown RBP1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 UBR5O95071 2799 aaPredicted RBP1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 LOC107984640A0A0U1RRK4 108 aa1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 JMJD7-PLA2G4BH0Y9G9 81 aa1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 J3KT08 172 aa1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 KLF7O75840 302 aaPredicted RBP1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 GLIPR1L1Q6UWM5 242 aa1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 LINC00299Q6ZSB3 139 aa1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 DEFB106AQ8N104 65 aa1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 TEX29Q8N6K0 151 aa1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 CBLN4Q9NTU7 201 aa1.45□□□□□ -2.18
RAB3IP-217ENST00000552610 DNAJC13O75165 2243 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms